RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 CERKQ8TCT0 537 aa21.86■■□□□ 1.09
SHANK1-207ENST00000483128 CAMSAP1Q5T5Y3 1602 aa21.86■■□□□ 1.09
SHANK1-207ENST00000483128 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
SHANK1-207ENST00000483128 ABCC5O15440 1437 aa21.86■■□□□ 1.09
SHANK1-207ENST00000483128 NCOA1Q15788 1441 aa21.85■■□□□ 1.09
SHANK1-207ENST00000483128 RRP7BPQ9NSQ0 103 aa21.84■■□□□ 1.09
SHANK1-207ENST00000483128 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
SHANK1-207ENST00000483128 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
SHANK1-207ENST00000483128 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
SHANK1-207ENST00000483128 PTPRTO14522 1441 aa21.81■■□□□ 1.08
SHANK1-207ENST00000483128 DAPK1P53355 1430 aa21.81■■□□□ 1.08
SHANK1-207ENST00000483128 TNRQ92752 1358 aa21.81■■□□□ 1.08
SHANK1-207ENST00000483128 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
SHANK1-207ENST00000483128 PZPP20742 1482 aa21.81■■□□□ 1.08
SHANK1-207ENST00000483128 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
SHANK1-207ENST00000483128 DUOX2Q9NRD8 1548 aa21.8■■□□□ 1.08
SHANK1-207ENST00000483128 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
SHANK1-207ENST00000483128 ZNF142P52746 1687 aaPredicted RBP21.8■■□□□ 1.08
SHANK1-207ENST00000483128 RNF17Q9BXT8 1623 aaKnown RBP21.8■■□□□ 1.08
SHANK1-207ENST00000483128 CROCC2H7BZ55 1655 aa21.79■■□□□ 1.08
SHANK1-207ENST00000483128 SHANK2Q9UPX8 1470 aa21.79■■□□□ 1.08
SHANK1-207ENST00000483128 FAM50AQ14320 339 aaKnown RBP21.79■■□□□ 1.08
SHANK1-207ENST00000483128 DNMT1P26358 1616 aaKnown RBP21.78■■□□□ 1.08
SHANK1-207ENST00000483128 EIF2AK4Q9P2K8 1649 aaKnown RBP21.78■■□□□ 1.08
SHANK1-207ENST00000483128 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.07
SHANK1-207ENST00000483128 ABCC3O15438 1527 aa21.76■■□□□ 1.07
SHANK1-207ENST00000483128 MROH1Q8NDA8 1641 aa21.74■■□□□ 1.07
SHANK1-207ENST00000483128 PKD2Q13563 968 aa21.74■■□□□ 1.07
SHANK1-207ENST00000483128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.07
SHANK1-207ENST00000483128 PLA2R1Q13018 1463 aa21.73■■□□□ 1.07
SHANK1-207ENST00000483128 ANKRD30AQ9BXX3 1397 aa21.73■■□□□ 1.07
SHANK1-207ENST00000483128 ERBINQ96RT1 1412 aa21.72■■□□□ 1.07
SHANK1-207ENST00000483128 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
SHANK1-207ENST00000483128 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
SHANK1-207ENST00000483128 CEP152O94986 1710 aa21.72■■□□□ 1.07
SHANK1-207ENST00000483128 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
SHANK1-207ENST00000483128 NLRP1Q9C000 1473 aa21.67■■□□□ 1.06
SHANK1-207ENST00000483128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.67■■□□□ 1.06
SHANK1-207ENST00000483128 ZNF335Q9H4Z2 1342 aaPredicted RBP21.67■■□□□ 1.06
SHANK1-207ENST00000483128 THEMISQ8N1K5 641 aaPredicted RBP21.67■■□□□ 1.06
SHANK1-207ENST00000483128 LTBP4Q8N2S1 1624 aa21.66■■□□□ 1.06
SHANK1-207ENST00000483128 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
SHANK1-207ENST00000483128 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
SHANK1-207ENST00000483128 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
SHANK1-207ENST00000483128 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
SHANK1-207ENST00000483128 KANK1Q14678 1352 aa21.63■■□□□ 1.05
SHANK1-207ENST00000483128 ANKLE2Q86XL3 938 aa21.63■■□□□ 1.05
SHANK1-207ENST00000483128 ADGRL2O95490 1459 aa21.62■■□□□ 1.05
SHANK1-207ENST00000483128 DEPDC5O75140 1603 aa21.61■■□□□ 1.05
SHANK1-207ENST00000483128 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
SHANK1-207ENST00000483128 ARHGAP31Q2M1Z3 1444 aa21.59■■□□□ 1.05
SHANK1-207ENST00000483128 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
SHANK1-207ENST00000483128 ITGAEP38570 1179 aa21.58■■□□□ 1.05
SHANK1-207ENST00000483128 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
SHANK1-207ENST00000483128 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
SHANK1-207ENST00000483128 NPHP4O75161 1426 aaPredicted RBP21.53■■□□□ 1.04
SHANK1-207ENST00000483128 LMTK2Q8IWU2 1503 aa21.52■■□□□ 1.04
SHANK1-207ENST00000483128 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.03
SHANK1-207ENST00000483128 STAG3Q9UJ98 1225 aa21.51■■□□□ 1.03
SHANK1-207ENST00000483128 IQSEC2Q5JU85 1478 aa21.51■■□□□ 1.03
SHANK1-207ENST00000483128 MED14O60244 1454 aa21.5■■□□□ 1.03
SHANK1-207ENST00000483128 IDI1Q13907 227 aa21.48■■□□□ 1.03
SHANK1-207ENST00000483128 TXNDC2Q86VQ3 553 aa21.48■■□□□ 1.03
SHANK1-207ENST00000483128 EFCAB6Q5THR3 1501 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 UBAP1LF5GYI3 381 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 LTKP29376 864 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 PIK3C2BO00750 1634 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 ROCK1Q13464 1354 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
SHANK1-207ENST00000483128 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.02
SHANK1-207ENST00000483128 EID1Q9Y6B2 187 aa21.44■■□□□ 1.02
SHANK1-207ENST00000483128 SYNMO15061 1565 aa21.44■■□□□ 1.02
SHANK1-207ENST00000483128 NOS1P29475 1434 aa21.43■■□□□ 1.02
SHANK1-207ENST00000483128 SLIT1O75093 1534 aa21.42■■□□□ 1.02
SHANK1-207ENST00000483128 CPS1P31327 1500 aa21.42■■□□□ 1.02
SHANK1-207ENST00000483128 ARHGAP23Q9P227 1491 aa21.42■■□□□ 1.02
SHANK1-207ENST00000483128 TMEM2Q9UHN6 1383 aa21.41■■□□□ 1.02
SHANK1-207ENST00000483128 SLC52A1Q9NWF4 448 aa21.4■■□□□ 1.02
SHANK1-207ENST00000483128 UNC13BO14795 1591 aa21.4■■□□□ 1.02
SHANK1-207ENST00000483128 TET3O43151 1660 aa21.39■■□□□ 1.01
SHANK1-207ENST00000483128 RPRD2Q5VT52 1461 aaKnown RBP21.39■■□□□ 1.01
SHANK1-207ENST00000483128 NUP155O75694 1391 aa21.37■■□□□ 1.01
SHANK1-207ENST00000483128 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
SHANK1-207ENST00000483128 RRBP1Q9P2E9 1410 aaKnown RBP21.36■■□□□ 1.01
SHANK1-207ENST00000483128 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
SHANK1-207ENST00000483128 PIP4K2BP78356 416 aa21.35■■□□□ 1.01
SHANK1-207ENST00000483128 STRCP1A6NGW2 1772 aa21.35■■□□□ 1.01
SHANK1-207ENST00000483128 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
SHANK1-207ENST00000483128 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
SHANK1-207ENST00000483128 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
SHANK1-207ENST00000483128 TOM1O60784 492 aa21.33■■□□□ 1.01
SHANK1-207ENST00000483128 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
SHANK1-207ENST00000483128 E9PCH4 1651 aa21.32■■□□□ 1
SHANK1-207ENST00000483128 IQGAP3Q86VI3 1631 aa21.32■■□□□ 1
SHANK1-207ENST00000483128 BCANQ96GW7 911 aa21.31■■□□□ 1
SHANK1-207ENST00000483128 SLC26A8Q96RN1 970 aa21.31■■□□□ 1
SHANK1-207ENST00000483128 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
SHANK1-207ENST00000483128 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
SHANK1-207ENST00000483128 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
SHANK1-207ENST00000483128 DISP3Q9P2K9 1392 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms