RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
ZKSCAN1-204ENST00000482979 PLA2R1Q13018 1463 aa20.46■□□□□ 0.87
ZKSCAN1-204ENST00000482979 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
ZKSCAN1-204ENST00000482979 TCOF1Q13428 1488 aaKnown RBP20.45■□□□□ 0.86
ZKSCAN1-204ENST00000482979 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
ZKSCAN1-204ENST00000482979 FBXO31Q5XUX0 539 aaPredicted RBP20.44■□□□□ 0.86
ZKSCAN1-204ENST00000482979 A2ML1A8K2U0 1454 aa20.43■□□□□ 0.86
ZKSCAN1-204ENST00000482979 MAST1Q9Y2H9 1570 aa20.43■□□□□ 0.86
ZKSCAN1-204ENST00000482979 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
ZKSCAN1-204ENST00000482979 DNMT1P26358 1616 aaKnown RBP20.43■□□□□ 0.86
ZKSCAN1-204ENST00000482979 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
ZKSCAN1-204ENST00000482979 PZPP20742 1482 aa20.42■□□□□ 0.86
ZKSCAN1-204ENST00000482979 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
ZKSCAN1-204ENST00000482979 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
ZKSCAN1-204ENST00000482979 TNRQ92752 1358 aa20.4■□□□□ 0.86
ZKSCAN1-204ENST00000482979 PKD2Q13563 968 aa20.4■□□□□ 0.86
ZKSCAN1-204ENST00000482979 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
ZKSCAN1-204ENST00000482979 ZNF335Q9H4Z2 1342 aaPredicted RBP20.4■□□□□ 0.86
ZKSCAN1-204ENST00000482979 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
ZKSCAN1-204ENST00000482979 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
ZKSCAN1-204ENST00000482979 RNF17Q9BXT8 1623 aaKnown RBP20.38■□□□□ 0.85
ZKSCAN1-204ENST00000482979 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
ZKSCAN1-204ENST00000482979 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
ZKSCAN1-204ENST00000482979 MROH1Q8NDA8 1641 aa20.34■□□□□ 0.85
ZKSCAN1-204ENST00000482979 ABCC3O15438 1527 aa20.34■□□□□ 0.85
ZKSCAN1-204ENST00000482979 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
ZKSCAN1-204ENST00000482979 EIF2AK4Q9P2K8 1649 aaKnown RBP20.34■□□□□ 0.85
ZKSCAN1-204ENST00000482979 POLR1AO95602 1720 aaPredicted RBP20.32■□□□□ 0.84
ZKSCAN1-204ENST00000482979 ZC3H13Q5T200 1668 aaKnown RBP20.31■□□□□ 0.84
ZKSCAN1-204ENST00000482979 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
ZKSCAN1-204ENST00000482979 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 ABCC5O15440 1437 aa20.29■□□□□ 0.84
ZKSCAN1-204ENST00000482979 CEP152O94986 1710 aa20.28■□□□□ 0.84
ZKSCAN1-204ENST00000482979 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
ZKSCAN1-204ENST00000482979 SHANK2Q9UPX8 1470 aa20.26■□□□□ 0.83
ZKSCAN1-204ENST00000482979 ERVK-7P63135 1459 aa20.26■□□□□ 0.83
ZKSCAN1-204ENST00000482979 KIF15Q9NS87 1388 aa20.24■□□□□ 0.83
ZKSCAN1-204ENST00000482979 ITGAEP38570 1179 aa20.24■□□□□ 0.83
ZKSCAN1-204ENST00000482979 DAPK1P53355 1430 aa20.24■□□□□ 0.83
ZKSCAN1-204ENST00000482979 THEMISQ8N1K5 641 aaPredicted RBP20.23■□□□□ 0.83
ZKSCAN1-204ENST00000482979 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
ZKSCAN1-204ENST00000482979 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
ZKSCAN1-204ENST00000482979 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
ZKSCAN1-204ENST00000482979 DEPDC5O75140 1603 aa20.22■□□□□ 0.83
ZKSCAN1-204ENST00000482979 ERBINQ96RT1 1412 aa20.21■□□□□ 0.83
ZKSCAN1-204ENST00000482979 RRP7BPQ9NSQ0 103 aa20.21■□□□□ 0.83
ZKSCAN1-204ENST00000482979 MED14O60244 1454 aa20.21■□□□□ 0.83
ZKSCAN1-204ENST00000482979 CFAP65Q6ZU64 1925 aaKnown RBP20.21■□□□□ 0.83
ZKSCAN1-204ENST00000482979 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
ZKSCAN1-204ENST00000482979 DISP3Q9P2K9 1392 aa20.2■□□□□ 0.82
ZKSCAN1-204ENST00000482979 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
ZKSCAN1-204ENST00000482979 CPS1P31327 1500 aa20.18■□□□□ 0.82
ZKSCAN1-204ENST00000482979 PCGF6Q9BYE7 350 aa20.18■□□□□ 0.82
ZKSCAN1-204ENST00000482979 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
ZKSCAN1-204ENST00000482979 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
ZKSCAN1-204ENST00000482979 ARHGAP31Q2M1Z3 1444 aa20.17■□□□□ 0.82
ZKSCAN1-204ENST00000482979 ILDR2Q71H61 639 aa20.15■□□□□ 0.82
ZKSCAN1-204ENST00000482979 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
ZKSCAN1-204ENST00000482979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.817e-11■■□□□ 11.6
ZKSCAN1-204ENST00000482979 STRCP1A6NGW2 1772 aa20.12■□□□□ 0.81
ZKSCAN1-204ENST00000482979 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
ZKSCAN1-204ENST00000482979 ARHGAP23Q9P227 1491 aa20.1■□□□□ 0.81
ZKSCAN1-204ENST00000482979 LMTK2Q8IWU2 1503 aa20.09■□□□□ 0.81
ZKSCAN1-204ENST00000482979 ALKQ9UM73 1620 aa20.09■□□□□ 0.81
ZKSCAN1-204ENST00000482979 ADGRL2O95490 1459 aa20.09■□□□□ 0.81
ZKSCAN1-204ENST00000482979 SLIT1O75093 1534 aa20.09■□□□□ 0.81
ZKSCAN1-204ENST00000482979 PIK3C2BO00750 1634 aa20.08■□□□□ 0.81
ZKSCAN1-204ENST00000482979 LTKP29376 864 aa20.08■□□□□ 0.8
ZKSCAN1-204ENST00000482979 SCAF11Q99590 1463 aaKnown RBP20.08■□□□□ 0.8
ZKSCAN1-204ENST00000482979 KANK1Q14678 1352 aa20.07■□□□□ 0.8
ZKSCAN1-204ENST00000482979 PIP4K2BP78356 416 aa20.06■□□□□ 0.8
ZKSCAN1-204ENST00000482979 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
ZKSCAN1-204ENST00000482979 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
ZKSCAN1-204ENST00000482979 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
ZKSCAN1-204ENST00000482979 TOM1O60784 492 aa20.04■□□□□ 0.8
ZKSCAN1-204ENST00000482979 SYNMO15061 1565 aa20.04■□□□□ 0.8
ZKSCAN1-204ENST00000482979 HSPA1LP34931 641 aa20.03■□□□□ 0.8
ZKSCAN1-204ENST00000482979 TXNDC2Q86VQ3 553 aa20.03■□□□□ 0.8
ZKSCAN1-204ENST00000482979 EFCAB6Q5THR3 1501 aa20.03■□□□□ 0.8
ZKSCAN1-204ENST00000482979 ROCK1Q13464 1354 aa20.02■□□□□ 0.8
ZKSCAN1-204ENST00000482979 TMEM2Q9UHN6 1383 aa20.01■□□□□ 0.79
ZKSCAN1-204ENST00000482979 IDI1Q13907 227 aa20.01■□□□□ 0.79
ZKSCAN1-204ENST00000482979 NOS1P29475 1434 aa20.01■□□□□ 0.79
ZKSCAN1-204ENST00000482979 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
ZKSCAN1-204ENST00000482979 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
ZKSCAN1-204ENST00000482979 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
ZKSCAN1-204ENST00000482979 NAIPQ13075 1403 aa19.97■□□□□ 0.79
ZKSCAN1-204ENST00000482979 SOCS7O14512 581 aa19.96■□□□□ 0.79
ZKSCAN1-204ENST00000482979 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
ZKSCAN1-204ENST00000482979 EID1Q9Y6B2 187 aa19.96■□□□□ 0.79
ZKSCAN1-204ENST00000482979 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
ZKSCAN1-204ENST00000482979 ADGRB3O60242 1522 aa19.95■□□□□ 0.78
ZKSCAN1-204ENST00000482979 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
ZKSCAN1-204ENST00000482979 TET3O43151 1660 aa19.93■□□□□ 0.78
ZKSCAN1-204ENST00000482979 MED1Q15648 1581 aaPredicted RBP19.93■□□□□ 0.78
ZKSCAN1-204ENST00000482979 UNC13BO14795 1591 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms