RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
TSPAN1-208ENST00000482928 RRP7BPQ9NSQ0 103 aa18.44■□□□□ 0.54
TSPAN1-208ENST00000482928 C3P01024 1663 aa18.44■□□□□ 0.54
TSPAN1-208ENST00000482928 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
TSPAN1-208ENST00000482928 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
TSPAN1-208ENST00000482928 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
TSPAN1-208ENST00000482928 C9orf84Q5VXU9 1444 aa18.42■□□□□ 0.54
TSPAN1-208ENST00000482928 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
TSPAN1-208ENST00000482928 POTEAQ6S8J7 498 aa18.42■□□□□ 0.54
TSPAN1-208ENST00000482928 ABCC1P33527 1531 aa18.42■□□□□ 0.54
TSPAN1-208ENST00000482928 NAIPQ13075 1403 aa18.4■□□□□ 0.54
TSPAN1-208ENST00000482928 MBD5Q9P267 1494 aa18.39■□□□□ 0.54
TSPAN1-208ENST00000482928 HRCP23327 699 aa18.39■□□□□ 0.53
TSPAN1-208ENST00000482928 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
TSPAN1-208ENST00000482928 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
TSPAN1-208ENST00000482928 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
TSPAN1-208ENST00000482928 MAST1Q9Y2H9 1570 aa18.35■□□□□ 0.53
TSPAN1-208ENST00000482928 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
TSPAN1-208ENST00000482928 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
TSPAN1-208ENST00000482928 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
TSPAN1-208ENST00000482928 NCKAP5LQ9HCH0 1330 aa18.34■□□□□ 0.53
TSPAN1-208ENST00000482928 UPF1Q92900 1129 aaKnown RBP eCLIP18.34■□□□□ 0.53
TSPAN1-208ENST00000482928 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
TSPAN1-208ENST00000482928 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
TSPAN1-208ENST00000482928 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
TSPAN1-208ENST00000482928 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
TSPAN1-208ENST00000482928 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
TSPAN1-208ENST00000482928 CPS1P31327 1500 aa18.31■□□□□ 0.52
TSPAN1-208ENST00000482928 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
TSPAN1-208ENST00000482928 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
TSPAN1-208ENST00000482928 ANKRD50Q9ULJ7 1429 aa18.28■□□□□ 0.52
TSPAN1-208ENST00000482928 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
TSPAN1-208ENST00000482928 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
TSPAN1-208ENST00000482928 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
TSPAN1-208ENST00000482928 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
TSPAN1-208ENST00000482928 ATP10AO60312 1499 aa18.25■□□□□ 0.51
TSPAN1-208ENST00000482928 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
TSPAN1-208ENST00000482928 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
TSPAN1-208ENST00000482928 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
TSPAN1-208ENST00000482928 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
TSPAN1-208ENST00000482928 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
TSPAN1-208ENST00000482928 PKD2Q13563 968 aa18.21■□□□□ 0.51
TSPAN1-208ENST00000482928 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
TSPAN1-208ENST00000482928 ZNF142P52746 1687 aaPredicted RBP18.19■□□□□ 0.5
TSPAN1-208ENST00000482928 ERBINQ96RT1 1412 aa18.19■□□□□ 0.5
TSPAN1-208ENST00000482928 KDM5CP41229 1560 aa18.18■□□□□ 0.5
TSPAN1-208ENST00000482928 MLH3Q9UHC1 1453 aa18.15■□□□□ 0.5
TSPAN1-208ENST00000482928 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
TSPAN1-208ENST00000482928 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
TSPAN1-208ENST00000482928 NUP155O75694 1391 aa18.15■□□□□ 0.5
TSPAN1-208ENST00000482928 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
TSPAN1-208ENST00000482928 ESF1Q9H501 851 aaKnown RBP18.14■□□□□ 0.49
TSPAN1-208ENST00000482928 RNF17Q9BXT8 1623 aaKnown RBP18.13■□□□□ 0.49
TSPAN1-208ENST00000482928 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
TSPAN1-208ENST00000482928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
TSPAN1-208ENST00000482928 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
TSPAN1-208ENST00000482928 UNC13BO14795 1591 aa18.1■□□□□ 0.49
TSPAN1-208ENST00000482928 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
TSPAN1-208ENST00000482928 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
TSPAN1-208ENST00000482928 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
TSPAN1-208ENST00000482928 A2MP01023 1474 aa18.09■□□□□ 0.49
TSPAN1-208ENST00000482928 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.49
TSPAN1-208ENST00000482928 KANK1Q14678 1352 aa18.08■□□□□ 0.49
TSPAN1-208ENST00000482928 PZPP20742 1482 aa18.07■□□□□ 0.48
TSPAN1-208ENST00000482928 NPATQ14207 1427 aa18.07■□□□□ 0.48
TSPAN1-208ENST00000482928 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
TSPAN1-208ENST00000482928 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
TSPAN1-208ENST00000482928 KIF3BO15066 747 aa18.06■□□□□ 0.48
TSPAN1-208ENST00000482928 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
TSPAN1-208ENST00000482928 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
TSPAN1-208ENST00000482928 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
TSPAN1-208ENST00000482928 MROH2AA6NES4 1674 aa18.04■□□□□ 0.48
TSPAN1-208ENST00000482928 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
TSPAN1-208ENST00000482928 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
TSPAN1-208ENST00000482928 AGLP35573 1532 aa18.02■□□□□ 0.47
TSPAN1-208ENST00000482928 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 SETBP1Q9Y6X0 1596 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 FOXD1Q16676 465 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
TSPAN1-208ENST00000482928 REREQ9P2R6 1566 aa18■□□□□ 0.47
TSPAN1-208ENST00000482928 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
TSPAN1-208ENST00000482928 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
TSPAN1-208ENST00000482928 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
TSPAN1-208ENST00000482928 SYNMO15061 1565 aa17.98■□□□□ 0.47
TSPAN1-208ENST00000482928 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
TSPAN1-208ENST00000482928 GGT6Q6P531 493 aa17.96■□□□□ 0.47
TSPAN1-208ENST00000482928 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
TSPAN1-208ENST00000482928 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
TSPAN1-208ENST00000482928 TET3O43151 1660 aa17.93■□□□□ 0.46
TSPAN1-208ENST00000482928 STRCP1A6NGW2 1772 aa17.92■□□□□ 0.46
TSPAN1-208ENST00000482928 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
TSPAN1-208ENST00000482928 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
TSPAN1-208ENST00000482928 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
TSPAN1-208ENST00000482928 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.45
TSPAN1-208ENST00000482928 CEP152O94986 1710 aa17.88■□□□□ 0.45
TSPAN1-208ENST00000482928 LMTK2Q8IWU2 1503 aa17.87■□□□□ 0.45
TSPAN1-208ENST00000482928 E9PCH4 1651 aa17.87■□□□□ 0.45
TSPAN1-208ENST00000482928 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms