RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 KIF15Q9NS87 1388 aa23.29■■□□□ 1.32
COL16A1-213ENST00000482910 NPATQ14207 1427 aa23.28■■□□□ 1.32
COL16A1-213ENST00000482910 FAM50AQ14320 339 aaKnown RBP23.28■■□□□ 1.32
COL16A1-213ENST00000482910 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
COL16A1-213ENST00000482910 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
COL16A1-213ENST00000482910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.32
COL16A1-213ENST00000482910 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
COL16A1-213ENST00000482910 KDM5DQ9BY66 1539 aa23.27■■□□□ 1.32
COL16A1-213ENST00000482910 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
COL16A1-213ENST00000482910 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
COL16A1-213ENST00000482910 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
COL16A1-213ENST00000482910 ZC3H13Q5T200 1668 aaKnown RBP23.22■■□□□ 1.31
COL16A1-213ENST00000482910 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
COL16A1-213ENST00000482910 PTPRKQ15262 1439 aa23.21■■□□□ 1.31
COL16A1-213ENST00000482910 MROH1Q8NDA8 1641 aa23.21■■□□□ 1.31
COL16A1-213ENST00000482910 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.3
COL16A1-213ENST00000482910 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
COL16A1-213ENST00000482910 PRDM15P57071 1507 aaPredicted RBP23.18■■□□□ 1.3
COL16A1-213ENST00000482910 PZPP20742 1482 aa23.17■■□□□ 1.3
COL16A1-213ENST00000482910 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
COL16A1-213ENST00000482910 DEPDC5O75140 1603 aa23.17■■□□□ 1.3
COL16A1-213ENST00000482910 ABCC3O15438 1527 aa23.17■■□□□ 1.3
COL16A1-213ENST00000482910 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
COL16A1-213ENST00000482910 HSPA2P54652 639 aa23.14■■□□□ 1.29
COL16A1-213ENST00000482910 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
COL16A1-213ENST00000482910 ANKRD50Q9ULJ7 1429 aa23.11■■□□□ 1.29
COL16A1-213ENST00000482910 ZNF142P52746 1687 aaPredicted RBP23.11■■□□□ 1.29
COL16A1-213ENST00000482910 CEP152O94986 1710 aa23.1■■□□□ 1.29
COL16A1-213ENST00000482910 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.29
COL16A1-213ENST00000482910 KANK1Q14678 1352 aa23.08■■□□□ 1.29
COL16A1-213ENST00000482910 VWDEQ8N2E2 1590 aa23.08■■□□□ 1.29
COL16A1-213ENST00000482910 ARHGAP31Q2M1Z3 1444 aa23.07■■□□□ 1.28
COL16A1-213ENST00000482910 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
COL16A1-213ENST00000482910 TNRQ92752 1358 aa23.06■■□□□ 1.28
COL16A1-213ENST00000482910 LMTK2Q8IWU2 1503 aa23.06■■□□□ 1.28
COL16A1-213ENST00000482910 SPATA31D1Q6ZQQ2 1576 aa23.05■■□□□ 1.28
COL16A1-213ENST00000482910 FBXO31Q5XUX0 539 aaPredicted RBP23.04■■□□□ 1.28
COL16A1-213ENST00000482910 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
COL16A1-213ENST00000482910 STRCQ7RTU9 1775 aa23.03■■□□□ 1.28
COL16A1-213ENST00000482910 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
COL16A1-213ENST00000482910 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
COL16A1-213ENST00000482910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.01■■□□□ 1.27
COL16A1-213ENST00000482910 PLA2R1Q13018 1463 aa23■■□□□ 1.27
COL16A1-213ENST00000482910 ITGAEP38570 1179 aa23■■□□□ 1.27
COL16A1-213ENST00000482910 UNC13BO14795 1591 aa23■■□□□ 1.27
COL16A1-213ENST00000482910 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
COL16A1-213ENST00000482910 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
COL16A1-213ENST00000482910 CFAP65Q6ZU64 1925 aaKnown RBP22.96■■□□□ 1.27
COL16A1-213ENST00000482910 PTPRTO14522 1441 aa22.95■■□□□ 1.26
COL16A1-213ENST00000482910 TET3O43151 1660 aa22.93■■□□□ 1.26
COL16A1-213ENST00000482910 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
COL16A1-213ENST00000482910 PKD2Q13563 968 aa22.91■■□□□ 1.26
COL16A1-213ENST00000482910 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
COL16A1-213ENST00000482910 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
COL16A1-213ENST00000482910 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
COL16A1-213ENST00000482910 FBXO41Q8TF61 875 aa22.9■■□□□ 1.26
COL16A1-213ENST00000482910 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
COL16A1-213ENST00000482910 NAIPQ13075 1403 aa22.89■■□□□ 1.25
COL16A1-213ENST00000482910 NOS1P29475 1434 aa22.88■■□□□ 1.25
COL16A1-213ENST00000482910 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
COL16A1-213ENST00000482910 POLR1AO95602 1720 aaPredicted RBP22.85■■□□□ 1.25
COL16A1-213ENST00000482910 UBR1Q8IWV7 1749 aa22.85■■□□□ 1.25
COL16A1-213ENST00000482910 NUP155O75694 1391 aa22.84■■□□□ 1.25
COL16A1-213ENST00000482910 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
COL16A1-213ENST00000482910 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
COL16A1-213ENST00000482910 SYNMO15061 1565 aa22.83■■□□□ 1.25
COL16A1-213ENST00000482910 E9PCH4 1651 aa22.81■■□□□ 1.24
COL16A1-213ENST00000482910 PIK3C2BO00750 1634 aa22.8■■□□□ 1.24
COL16A1-213ENST00000482910 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
COL16A1-213ENST00000482910 SLC52A1Q9NWF4 448 aa22.8■■□□□ 1.24
COL16A1-213ENST00000482910 NEURL4Q96JN8 1562 aa22.79■■□□□ 1.24
COL16A1-213ENST00000482910 MED14O60244 1454 aa22.78■■□□□ 1.24
COL16A1-213ENST00000482910 SLIT1O75093 1534 aa22.77■■□□□ 1.24
COL16A1-213ENST00000482910 IDI1Q13907 227 aa22.77■■□□□ 1.24
COL16A1-213ENST00000482910 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
COL16A1-213ENST00000482910 ADGRB3O60242 1522 aa22.73■■□□□ 1.23
COL16A1-213ENST00000482910 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
COL16A1-213ENST00000482910 TMEM2Q9UHN6 1383 aa22.71■■□□□ 1.23
COL16A1-213ENST00000482910 NPHP4O75161 1426 aaPredicted RBP22.71■■□□□ 1.23
COL16A1-213ENST00000482910 SCAF11Q99590 1463 aaKnown RBP22.71■■□□□ 1.23
COL16A1-213ENST00000482910 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
COL16A1-213ENST00000482910 CERKQ8TCT0 537 aa22.7■■□□□ 1.22
COL16A1-213ENST00000482910 IQGAP1P46940 1657 aa22.69■■□□□ 1.22
COL16A1-213ENST00000482910 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
COL16A1-213ENST00000482910 SPHKAPQ2M3C7 1700 aa22.68■■□□□ 1.22
COL16A1-213ENST00000482910 EID1Q9Y6B2 187 aa22.67■■□□□ 1.22
COL16A1-213ENST00000482910 TMEM131LA2VDJ0 1609 aa22.66■■□□□ 1.22
COL16A1-213ENST00000482910 LTKP29376 864 aa22.65■■□□□ 1.22
COL16A1-213ENST00000482910 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
COL16A1-213ENST00000482910 IQSEC2Q5JU85 1478 aa22.65■■□□□ 1.22
COL16A1-213ENST00000482910 TRIM52Q96A61 297 aa22.64■■□□□ 1.21
COL16A1-213ENST00000482910 ZNF335Q9H4Z2 1342 aaPredicted RBP22.63■■□□□ 1.21
COL16A1-213ENST00000482910 MYO5BQ9ULV0 1848 aa22.62■■□□□ 1.21
COL16A1-213ENST00000482910 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
COL16A1-213ENST00000482910 TRPM2O94759 1503 aa22.61■■□□□ 1.21
COL16A1-213ENST00000482910 ZFYVE9O95405 1425 aa22.6■■□□□ 1.21
COL16A1-213ENST00000482910 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
COL16A1-213ENST00000482910 CPS1P31327 1500 aa22.58■■□□□ 1.21
COL16A1-213ENST00000482910 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
COL16A1-213ENST00000482910 RIMS2Q9UQ26 1411 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms