RNA–Protein interactions for RNA: ENST00000482646.5

CREM-233, Transcript of cAMP responsive element modulator, human

TSL 3

Gene CREM, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-233	ENST00000482646	CNTLN	Q9NXG0	1405 aa		33.25	■■■□□ 2.91
CREM-233	ENST00000482646	SETD1B	Q9UPS6	1966 aa	Known RBP	33.25	■■■□□ 2.91
CREM-233	ENST00000482646	C3	P01024	1663 aa		33.24	■■■□□ 2.91
CREM-233	ENST00000482646	NCOA1	Q15788	1441 aa		33.23	■■■□□ 2.91
CREM-233	ENST00000482646	DMRT2	Q9Y5R5	561 aa		33.19	■■■□□ 2.9
CREM-233	ENST00000482646	KIF15	Q9NS87	1388 aa		33.19	■■■□□ 2.9
CREM-233	ENST00000482646	DUOX2	Q9NRD8	1548 aa		33.18	■■■□□ 2.9
CREM-233	ENST00000482646	HFM1	A2PYH4	1435 aa		33.17	■■■□□ 2.9
CREM-233	ENST00000482646	RRP7BP	Q9NSQ0	103 aa		33.14	■■■□□ 2.9
CREM-233	ENST00000482646	A2M	P01023	1474 aa		33.13	■■■□□ 2.89
CREM-233	ENST00000482646	PCGF6	Q9BYE7	350 aa		33.13	■■■□□ 2.89
CREM-233	ENST00000482646	CERK	Q8TCT0	537 aa		33.12	■■■□□ 2.89
CREM-233	ENST00000482646	NAIP	Q13075	1403 aa		33.11	■■■□□ 2.89
CREM-233	ENST00000482646	MROH2A	A6NES4	1674 aa		33.1	■■■□□ 2.89
CREM-233	ENST00000482646	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.1	■■■□□ 2.89
CREM-233	ENST00000482646	ERBIN	Q96RT1	1412 aa		33.09	■■■□□ 2.89
CREM-233	ENST00000482646	STRC	Q7RTU9	1775 aa		33.09	■■■□□ 2.89
CREM-233	ENST00000482646	NPAT	Q14207	1427 aa		33.07	■■■□□ 2.88
CREM-233	ENST00000482646	ZMYM3	Q14202	1370 aa		33.07	■■■□□ 2.88
CREM-233	ENST00000482646	ANKRD50	Q9ULJ7	1429 aa		33.06	■■■□□ 2.88
CREM-233	ENST00000482646	DHX29	Q7Z478	1369 aa	Known RBP	33.05	■■■□□ 2.88
CREM-233	ENST00000482646	SETD5	Q9C0A6	1442 aa		33.03	■■■□□ 2.88
CREM-233	ENST00000482646	GGT6	Q6P531	493 aa		33.03	■■■□□ 2.88
CREM-233	ENST00000482646	PPP6R1	Q9UPN7	881 aa		33	■■■□□ 2.87
CREM-233	ENST00000482646	CLTC	Q00610	1675 aa	Known RBP	32.99	■■■□□ 2.87
CREM-233	ENST00000482646	PTPRT	O14522	1441 aa		32.98	■■■□□ 2.87
CREM-233	ENST00000482646	RNF17	Q9BXT8	1623 aa	Known RBP	32.95	■■■□□ 2.86
CREM-233	ENST00000482646	DEPDC5	O75140	1603 aa		32.94	■■■□□ 2.86
CREM-233	ENST00000482646	RAB3GAP2	Q9H2M9	1393 aa		32.94	■■■□□ 2.86
CREM-233	ENST00000482646	UNC13B	O14795	1591 aa		32.93	■■■□□ 2.86
CREM-233	ENST00000482646	CAMSAP1	Q5T5Y3	1602 aa		32.88	■■■□□ 2.85
CREM-233	ENST00000482646	KIF3B	O15066	747 aa		32.87	■■■□□ 2.85
CREM-233	ENST00000482646	PRDM15	P57071	1507 aa	Predicted RBP	32.86	■■■□□ 2.85
CREM-233	ENST00000482646	MROH1	Q8NDA8	1641 aa		32.85	■■■□□ 2.85
CREM-233	ENST00000482646	ACIN1	Q9UKV3	1341 aa	Known RBP	32.85	■■■□□ 2.85
CREM-233	ENST00000482646	MYO3A	Q8NEV4	1616 aa		32.84	■■■□□ 2.85
CREM-233	ENST00000482646	ZNF142	P52746	1687 aa	Predicted RBP	32.82	■■■□□ 2.84
CREM-233	ENST00000482646	HRC	P23327	699 aa		32.82	■■■□□ 2.84
CREM-233	ENST00000482646	KDM5D	Q9BY66	1539 aa		32.8	■■■□□ 2.84
CREM-233	ENST00000482646	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.79	■■■□□ 2.84
CREM-233	ENST00000482646	IQGAP3	Q86VI3	1631 aa		32.79	■■■□□ 2.84
CREM-233	ENST00000482646	ZC3H13	Q5T200	1668 aa	Known RBP	32.78	■■■□□ 2.84
CREM-233	ENST00000482646	FAM135A	Q9P2D6	1515 aa		32.77	■■■□□ 2.84
CREM-233	ENST00000482646	PLA2R1	Q13018	1463 aa		32.77	■■■□□ 2.84
CREM-233	ENST00000482646	PKD2	Q13563	968 aa		32.76	■■■□□ 2.83
CREM-233	ENST00000482646	NCKAP5L	Q9HCH0	1330 aa		32.76	■■■□□ 2.83
CREM-233	ENST00000482646	VWDE	Q8N2E2	1590 aa		32.75	■■■□□ 2.83
CREM-233	ENST00000482646	KANK1	Q14678	1352 aa		32.75	■■■□□ 2.83
CREM-233	ENST00000482646	CEP152	O94986	1710 aa		32.75	■■■□□ 2.83
CREM-233	ENST00000482646	TRIM52	Q96A61	297 aa		32.73	■■■□□ 2.83
CREM-233	ENST00000482646	WASHC2C	Q9Y4E1	1318 aa		32.73	■■■□□ 2.83
CREM-233	ENST00000482646	LTBP4	Q8N2S1	1624 aa		32.72	■■■□□ 2.83
CREM-233	ENST00000482646	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
CREM-233	ENST00000482646	NUP155	O75694	1391 aa		32.7	■■■□□ 2.83
CREM-233	ENST00000482646	A2ML1	A8K2U0	1454 aa		32.7	■■■□□ 2.83
CREM-233	ENST00000482646	TET3	O43151	1660 aa		32.69	■■■□□ 2.82
CREM-233	ENST00000482646	PZP	P20742	1482 aa		32.68	■■■□□ 2.82
CREM-233	ENST00000482646	IQSEC2	Q5JU85	1478 aa		32.67	■■■□□ 2.82
CREM-233	ENST00000482646	ABCC3	O15438	1527 aa		32.67	■■■□□ 2.82
CREM-233	ENST00000482646	TNR	Q92752	1358 aa		32.67	■■■□□ 2.82
CREM-233	ENST00000482646	LMTK2	Q8IWU2	1503 aa		32.66	■■■□□ 2.82
CREM-233	ENST00000482646	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.64	■■■□□ 2.82
CREM-233	ENST00000482646	EFCAB6	Q5THR3	1501 aa		32.6	■■■□□ 2.81
CREM-233	ENST00000482646	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.59	■■■□□ 2.81
CREM-233	ENST00000482646		E9PCH4	1651 aa		32.56	■■■□□ 2.8
CREM-233	ENST00000482646	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.55	■■■□□ 2.8
CREM-233	ENST00000482646	NLRP1	Q9C000	1473 aa		32.54	■■■□□ 2.8
CREM-233	ENST00000482646	MPHOSPH9	Q99550	1183 aa		32.53	■■■□□ 2.8
CREM-233	ENST00000482646	DHX57	Q6P158	1386 aa	Known RBP	32.51	■■■□□ 2.79
CREM-233	ENST00000482646	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.51	■■■□□ 2.79
CREM-233	ENST00000482646	POLR1A	O95602	1720 aa	Predicted RBP	32.49	■■■□□ 2.79
CREM-233	ENST00000482646	RPRD2	Q5VT52	1461 aa	Known RBP	32.48	■■■□□ 2.79
CREM-233	ENST00000482646	ANKLE2	Q86XL3	938 aa		32.48	■■■□□ 2.79
CREM-233	ENST00000482646	ARHGAP31	Q2M1Z3	1444 aa		32.47	■■■□□ 2.79
CREM-233	ENST00000482646	UGGT1	Q9NYU2	1555 aa		32.46	■■■□□ 2.79
CREM-233	ENST00000482646	SPHKAP	Q2M3C7	1700 aa		32.46	■■■□□ 2.79
CREM-233	ENST00000482646	CFAP65	Q6ZU64	1925 aa	Known RBP	32.45	■■■□□ 2.79
CREM-233	ENST00000482646	UBAP1L	F5GYI3	381 aa		32.43	■■■□□ 2.78
CREM-233	ENST00000482646	NEURL4	Q96JN8	1562 aa		32.41	■■■□□ 2.78
CREM-233	ENST00000482646	SPATA31D1	Q6ZQQ2	1576 aa		32.41	■■■□□ 2.78
CREM-233	ENST00000482646	ERVK-7	P63135	1459 aa		32.38	■■■□□ 2.77
CREM-233	ENST00000482646	DISP3	Q9P2K9	1392 aa		32.38	■■■□□ 2.77
CREM-233	ENST00000482646	CPS1	P31327	1500 aa		32.35	■■■□□ 2.77
CREM-233	ENST00000482646	TRPM2	O94759	1503 aa		32.34	■■■□□ 2.77
CREM-233	ENST00000482646	NPHP4	O75161	1426 aa	Predicted RBP	32.34	■■■□□ 2.77
CREM-233	ENST00000482646	MED14	O60244	1454 aa		32.33	■■■□□ 2.77
CREM-233	ENST00000482646	FOXD1	Q16676	465 aa		32.32	■■■□□ 2.76
CREM-233	ENST00000482646	NOS1	P29475	1434 aa		32.3	■■■□□ 2.76
CREM-233	ENST00000482646	CCER1	Q8TC90	406 aa	Predicted RBP	32.3	■■■□□ 2.76
CREM-233	ENST00000482646	SYNM	O15061	1565 aa		32.28	■■■□□ 2.76
CREM-233	ENST00000482646	ANKRD30B	Q9BXX2	1392 aa		32.26	■■■□□ 2.75
CREM-233	ENST00000482646	IQGAP1	P46940	1657 aa		32.26	■■■□□ 2.75
CREM-233	ENST00000482646	CLSPN	Q9HAW4	1339 aa		32.25	■■■□□ 2.75
CREM-233	ENST00000482646	PIK3C2B	O00750	1634 aa		32.23	■■■□□ 2.75
CREM-233	ENST00000482646	CLTCL1	P53675	1640 aa		32.23	■■■□□ 2.75
CREM-233	ENST00000482646	TOM1	O60784	492 aa		32.23	■■■□□ 2.75
CREM-233	ENST00000482646	UBR1	Q8IWV7	1749 aa		32.21	■■■□□ 2.75
CREM-233	ENST00000482646	CCDC144A	A2RUR9	1427 aa		32.21	■■■□□ 2.75
CREM-233	ENST00000482646	SCAF1	Q9H7N4	1312 aa	Known RBP	32.2	■■■□□ 2.74
CREM-233	ENST00000482646	KIF1B	O60333	1816 aa		32.19	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms