RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 KDM5DQ9BY66 1539 aa27.42■■□□□ 1.98
PDGFA-206ENST00000482462 MAGI2Q86UL8 1455 aa27.41■■□□□ 1.98
PDGFA-206ENST00000482462 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
PDGFA-206ENST00000482462 DIP2CQ9Y2E4 1556 aa27.4■■□□□ 1.98
PDGFA-206ENST00000482462 A2MP01023 1474 aa27.39■■□□□ 1.97
PDGFA-206ENST00000482462 COL17A1Q9UMD9 1497 aaPredicted RBP27.39■■□□□ 1.97
PDGFA-206ENST00000482462 DEPDC5O75140 1603 aa27.35■■□□□ 1.97
PDGFA-206ENST00000482462 PZPP20742 1482 aa27.35■■□□□ 1.97
PDGFA-206ENST00000482462 BCORL1Q5H9F3 1711 aa27.34■■□□□ 1.97
PDGFA-206ENST00000482462 MPHOSPH9Q99550 1183 aa27.33■■□□□ 1.97
PDGFA-206ENST00000482462 NUP155O75694 1391 aa27.33■■□□□ 1.97
PDGFA-206ENST00000482462 YTHDC1Q96MU7 727 aaKnown RBP27.32■■□□□ 1.96
PDGFA-206ENST00000482462 YEATS2Q9ULM3 1422 aa27.32■■□□□ 1.96
PDGFA-206ENST00000482462 IQGAP3Q86VI3 1631 aa27.31■■□□□ 1.96
PDGFA-206ENST00000482462 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
PDGFA-206ENST00000482462 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
PDGFA-206ENST00000482462 REREQ9P2R6 1566 aa27.28■■□□□ 1.96
PDGFA-206ENST00000482462 FAM135AQ9P2D6 1515 aa27.28■■□□□ 1.96
PDGFA-206ENST00000482462 ARHGEF40Q8TER5 1519 aa27.27■■□□□ 1.96
PDGFA-206ENST00000482462 ATP10AO60312 1499 aa27.26■■□□□ 1.95
PDGFA-206ENST00000482462 PRDM15P57071 1507 aaPredicted RBP27.25■■□□□ 1.95
PDGFA-206ENST00000482462 KIF3BO15066 747 aa27.25■■□□□ 1.95
PDGFA-206ENST00000482462 MROH1Q8NDA8 1641 aa27.24■■□□□ 1.95
PDGFA-206ENST00000482462 VWDEQ8N2E2 1590 aa27.22■■□□□ 1.95
PDGFA-206ENST00000482462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.21■■□□□ 1.95
PDGFA-206ENST00000482462 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
PDGFA-206ENST00000482462 KANK1Q14678 1352 aa27.18■■□□□ 1.94
PDGFA-206ENST00000482462 AGLP35573 1532 aa27.17■■□□□ 1.94
PDGFA-206ENST00000482462 MYT1Q01538 1121 aa27.17■■□□□ 1.94
PDGFA-206ENST00000482462 PKD2Q13563 968 aa27.16■■□□□ 1.94
PDGFA-206ENST00000482462 TET3O43151 1660 aa27.15■■□□□ 1.94
PDGFA-206ENST00000482462 ANKRD30BQ9BXX2 1392 aa27.14■■□□□ 1.93
PDGFA-206ENST00000482462 FOXD1Q16676 465 aa27.12■■□□□ 1.93
PDGFA-206ENST00000482462 CEP152O94986 1710 aa27.11■■□□□ 1.93
PDGFA-206ENST00000482462 LMTK2Q8IWU2 1503 aa27.11■■□□□ 1.93
PDGFA-206ENST00000482462 SIGLEC1Q9BZZ2 1709 aa27.1■■□□□ 1.93
PDGFA-206ENST00000482462 SIN3AQ96ST3 1273 aa27.09■■□□□ 1.93
PDGFA-206ENST00000482462 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
PDGFA-206ENST00000482462 E9PCH4 1651 aa27.09■■□□□ 1.93
PDGFA-206ENST00000482462 ZC3H13Q5T200 1668 aaKnown RBP27.09■■□□□ 1.93
PDGFA-206ENST00000482462 KDM4FA0A1W2PPD8 638 aa27.07■■□□□ 1.92
PDGFA-206ENST00000482462 GGT6Q6P531 493 aa27.07■■□□□ 1.92
PDGFA-206ENST00000482462 EFCAB6Q5THR3 1501 aa27.05■■□□□ 1.92
PDGFA-206ENST00000482462 ABCC3O15438 1527 aa27.04■■□□□ 1.92
PDGFA-206ENST00000482462 RPRD2Q5VT52 1461 aaKnown RBP27.02■■□□□ 1.92
PDGFA-206ENST00000482462 SPHKAPQ2M3C7 1700 aa27■■□□□ 1.91
PDGFA-206ENST00000482462 CAMSAP1Q5T5Y3 1602 aa27■■□□□ 1.91
PDGFA-206ENST00000482462 PPP6R1Q9UPN7 881 aa26.99■■□□□ 1.91
PDGFA-206ENST00000482462 WASHC2CQ9Y4E1 1318 aa26.98■■□□□ 1.91
PDGFA-206ENST00000482462 TONSLQ96HA7 1378 aa26.96■■□□□ 1.91
PDGFA-206ENST00000482462 PLA2R1Q13018 1463 aa26.95■■□□□ 1.91
PDGFA-206ENST00000482462 PTPRTO14522 1441 aa26.94■■□□□ 1.9
PDGFA-206ENST00000482462 TRPM2O94759 1503 aa26.93■■□□□ 1.9
PDGFA-206ENST00000482462 CCDC144AA2RUR9 1427 aa26.92■■□□□ 1.9
PDGFA-206ENST00000482462 ARHGAP31Q2M1Z3 1444 aa26.92■■□□□ 1.9
PDGFA-206ENST00000482462 NPATQ14207 1427 aa26.91■■□□□ 1.9
PDGFA-206ENST00000482462 CLTCQ00610 1675 aaKnown RBP26.9■■□□□ 1.9
PDGFA-206ENST00000482462 CFAP65Q6ZU64 1925 aaKnown RBP26.88■■□□□ 1.89
PDGFA-206ENST00000482462 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
PDGFA-206ENST00000482462 MLECQ14165 292 aa26.84■■□□□ 1.89
PDGFA-206ENST00000482462 CLTCL1P53675 1640 aa26.83■■□□□ 1.89
PDGFA-206ENST00000482462 CNTLNQ9NXG0 1405 aa26.82■■□□□ 1.88
PDGFA-206ENST00000482462 SUPT16HQ9Y5B9 1047 aaKnown RBP26.81■■□□□ 1.88
PDGFA-206ENST00000482462 PREX1Q8TCU6 1659 aa26.81■■□□□ 1.88
PDGFA-206ENST00000482462 NOS1P29475 1434 aa26.8■■□□□ 1.88
PDGFA-206ENST00000482462 MROH2AA6NES4 1674 aa26.8■■□□□ 1.88
PDGFA-206ENST00000482462 PPP1R15AO75807 674 aaPredicted RBP26.79■■□□□ 1.88
PDGFA-206ENST00000482462 L3MBTL2Q969R5 705 aa26.78■■□□□ 1.88
PDGFA-206ENST00000482462 ESF1Q9H501 851 aaKnown RBP26.78■■□□□ 1.88
PDGFA-206ENST00000482462 KIF1BO60333 1816 aa26.78■■□□□ 1.88
PDGFA-206ENST00000482462 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
PDGFA-206ENST00000482462 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.87
PDGFA-206ENST00000482462 SYNMO15061 1565 aa26.75■■□□□ 1.87
PDGFA-206ENST00000482462 PIK3C2BO00750 1634 aa26.74■■□□□ 1.87
PDGFA-206ENST00000482462 UGGT1Q9NYU2 1555 aa26.73■■□□□ 1.87
PDGFA-206ENST00000482462 ERVK-7P63135 1459 aa26.72■■□□□ 1.87
PDGFA-206ENST00000482462 SPATA31E1Q6ZUB1 1445 aa26.72■■□□□ 1.87
PDGFA-206ENST00000482462 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
PDGFA-206ENST00000482462 ZMYM3Q14202 1370 aa26.7■■□□□ 1.87
PDGFA-206ENST00000482462 CCER2I3L3R5 266 aa26.66■■□□□ 1.86
PDGFA-206ENST00000482462 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
PDGFA-206ENST00000482462 SLC52A1Q9NWF4 448 aa26.64■■□□□ 1.86
PDGFA-206ENST00000482462 C3P01024 1663 aa26.63■■□□□ 1.85
PDGFA-206ENST00000482462 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
PDGFA-206ENST00000482462 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
PDGFA-206ENST00000482462 FBXO31Q5XUX0 539 aaPredicted RBP26.63■■□□□ 1.85
PDGFA-206ENST00000482462 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
PDGFA-206ENST00000482462 MADDQ8WXG6 1647 aa26.62■■□□□ 1.85
PDGFA-206ENST00000482462 IFT172Q9UG01 1749 aa26.6■■□□□ 1.85
PDGFA-206ENST00000482462 DCAF11Q8TEB1 546 aa26.6■■□□□ 1.85
PDGFA-206ENST00000482462 RIMS1Q86UR5 1692 aaKnown RBP26.58■■□□□ 1.85
PDGFA-206ENST00000482462 STAC3Q96MF2 364 aa26.58■■□□□ 1.85
PDGFA-206ENST00000482462 IDI1Q13907 227 aa26.57■■□□□ 1.84
PDGFA-206ENST00000482462 DDX10Q13206 875 aaKnown RBP26.56■■□□□ 1.84
PDGFA-206ENST00000482462 TMEM131LA2VDJ0 1609 aa26.56■■□□□ 1.84
PDGFA-206ENST00000482462 NBPF8Q3BBV2 869 aa26.56■■□□□ 1.84
PDGFA-206ENST00000482462 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
PDGFA-206ENST00000482462 PPLO60437 1756 aa26.54■■□□□ 1.84
PDGFA-206ENST00000482462 KDM2AQ9Y2K7 1162 aa26.53■■□□□ 1.84
PDGFA-206ENST00000482462 PRAG1Q86YV5 1406 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms