RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 RNF17Q9BXT8 1623 aaKnown RBP32.26■■■□□ 2.75
TRA2A-206ENST00000482395 DUOX2Q9NRD8 1548 aa32.22■■■□□ 2.75
TRA2A-206ENST00000482395 ABCC5O15440 1437 aa32.22■■■□□ 2.75
TRA2A-206ENST00000482395 PTPRKQ15262 1439 aa32.21■■■□□ 2.75
TRA2A-206ENST00000482395 ZNF142P52746 1687 aaPredicted RBP32.21■■■□□ 2.75
TRA2A-206ENST00000482395 DAPK1P53355 1430 aa32.2■■■□□ 2.75
TRA2A-206ENST00000482395 ZC3H13Q5T200 1668 aaKnown RBP32.2■■■□□ 2.74
TRA2A-206ENST00000482395 STRCQ7RTU9 1775 aa32.19■■■□□ 2.74
TRA2A-206ENST00000482395 MYO3AQ8NEV4 1616 aa32.19■■■□□ 2.74
TRA2A-206ENST00000482395 DMRT2Q9Y5R5 561 aa32.14■■■□□ 2.74
TRA2A-206ENST00000482395 WASHC2CQ9Y4E1 1318 aa32.14■■■□□ 2.74
TRA2A-206ENST00000482395 PZPP20742 1482 aa32.14■■■□□ 2.74
TRA2A-206ENST00000482395 KIF15Q9NS87 1388 aa32.13■■■□□ 2.73
TRA2A-206ENST00000482395 ERBINQ96RT1 1412 aa32.12■■■□□ 2.73
TRA2A-206ENST00000482395 CEP170BQ9Y4F5 1589 aaPredicted RBP32.11■■■□□ 2.73
TRA2A-206ENST00000482395 MROH1Q8NDA8 1641 aa32.09■■■□□ 2.73
TRA2A-206ENST00000482395 ABCC3O15438 1527 aa32.07■■■□□ 2.72
TRA2A-206ENST00000482395 NCOA1Q15788 1441 aa32.07■■■□□ 2.72
TRA2A-206ENST00000482395 ANKRD30AQ9BXX3 1397 aa32.07■■■□□ 2.72
TRA2A-206ENST00000482395 CAMSAP1Q5T5Y3 1602 aa32.06■■■□□ 2.72
TRA2A-206ENST00000482395 PRDM15P57071 1507 aaPredicted RBP32.04■■■□□ 2.72
TRA2A-206ENST00000482395 ADGRL2O95490 1459 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 PTPRTO14522 1441 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 DEPDC5O75140 1603 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 CEP152O94986 1710 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 A2ML1A8K2U0 1454 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 PLA2R1Q13018 1463 aa32.03■■■□□ 2.72
TRA2A-206ENST00000482395 RRP7BPQ9NSQ0 103 aa32.01■■■□□ 2.71
TRA2A-206ENST00000482395 TNRQ92752 1358 aa32.01■■■□□ 2.71
TRA2A-206ENST00000482395 FAM50AQ14320 339 aaKnown RBP31.99■■■□□ 2.71
TRA2A-206ENST00000482395 NLRP1Q9C000 1473 aa31.96■■■□□ 2.71
TRA2A-206ENST00000482395 SPATA31D1Q6ZQQ2 1576 aa31.95■■■□□ 2.71
TRA2A-206ENST00000482395 CHIC2Q9UKJ5 165 aa31.95■■■□□ 2.71
TRA2A-206ENST00000482395 FBXO31Q5XUX0 539 aaPredicted RBP31.94■■■□□ 2.7
TRA2A-206ENST00000482395 PKD2Q13563 968 aa31.91■■■□□ 2.7
TRA2A-206ENST00000482395 KANK1Q14678 1352 aa31.91■■■□□ 2.7
TRA2A-206ENST00000482395 FBXO41Q8TF61 875 aa31.9■■■□□ 2.7
TRA2A-206ENST00000482395 ARHGAP31Q2M1Z3 1444 aa31.89■■■□□ 2.7
TRA2A-206ENST00000482395 ERVK-7P63135 1459 aa31.89■■■□□ 2.7
TRA2A-206ENST00000482395 POLR1AO95602 1720 aaPredicted RBP31.88■■■□□ 2.69
TRA2A-206ENST00000482395 CFAP65Q6ZU64 1925 aaKnown RBP31.87■■■□□ 2.69
TRA2A-206ENST00000482395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.69
TRA2A-206ENST00000482395 VWDEQ8N2E2 1590 aa31.85■■■□□ 2.69
TRA2A-206ENST00000482395 LMTK2Q8IWU2 1503 aa31.85■■■□□ 2.69
TRA2A-206ENST00000482395 UGGT1Q9NYU2 1555 aa31.85■■■□□ 2.69
TRA2A-206ENST00000482395 CERKQ8TCT0 537 aa31.83■■■□□ 2.69
TRA2A-206ENST00000482395 ANKRD50Q9ULJ7 1429 aa31.83■■■□□ 2.69
TRA2A-206ENST00000482395 ROCK1Q13464 1354 aa31.81■■■□□ 2.68
TRA2A-206ENST00000482395 NCKAP5LQ9HCH0 1330 aa31.8■■■□□ 2.68
TRA2A-206ENST00000482395 THEMISQ8N1K5 641 aaPredicted RBP31.79■■■□□ 2.68
TRA2A-206ENST00000482395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.79■■■□□ 2.68
TRA2A-206ENST00000482395 LTBP4Q8N2S1 1624 aa31.75■■■□□ 2.67
TRA2A-206ENST00000482395 EFCAB6Q5THR3 1501 aa31.74■■■□□ 2.67
TRA2A-206ENST00000482395 UBR1Q8IWV7 1749 aa31.73■■■□□ 2.67
TRA2A-206ENST00000482395 PPARGC1BQ86YN6 1023 aaKnown RBP31.73■■■□□ 2.67
TRA2A-206ENST00000482395 NEURL4Q96JN8 1562 aa31.73■■■□□ 2.67
TRA2A-206ENST00000482395 UNC13BO14795 1591 aa31.72■■■□□ 2.67
TRA2A-206ENST00000482395 IQSEC2Q5JU85 1478 aa31.7■■■□□ 2.66
TRA2A-206ENST00000482395 RRBP1Q9P2E9 1410 aaKnown RBP31.69■■■□□ 2.66
TRA2A-206ENST00000482395 ANKLE2Q86XL3 938 aa31.69■■■□□ 2.66
TRA2A-206ENST00000482395 TET3O43151 1660 aa31.68■■■□□ 2.66
TRA2A-206ENST00000482395 KDM5AP29375 1690 aaKnown RBP31.67■■■□□ 2.66
TRA2A-206ENST00000482395 GCC2Q8IWJ2 1684 aa31.67■■■□□ 2.66
TRA2A-206ENST00000482395 RPRD2Q5VT52 1461 aaKnown RBP31.66■■■□□ 2.66
TRA2A-206ENST00000482395 MED14O60244 1454 aa31.65■■■□□ 2.66
TRA2A-206ENST00000482395 PIK3C2BO00750 1634 aa31.63■■■□□ 2.65
TRA2A-206ENST00000482395 IQGAP1P46940 1657 aa31.61■■■□□ 2.65
TRA2A-206ENST00000482395 NOS1P29475 1434 aa31.61■■■□□ 2.65
TRA2A-206ENST00000482395 IQGAP3Q86VI3 1631 aa31.6■■■□□ 2.65
TRA2A-206ENST00000482395 SYNMO15061 1565 aa31.6■■■□□ 2.65
TRA2A-206ENST00000482395 NPHP4O75161 1426 aaPredicted RBP31.59■■■□□ 2.65
TRA2A-206ENST00000482395 ITGAEP38570 1179 aa31.59■■■□□ 2.65
TRA2A-206ENST00000482395 SLIT1O75093 1534 aa31.59■■■□□ 2.65
TRA2A-206ENST00000482395 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
TRA2A-206ENST00000482395 ARHGAP23Q9P227 1491 aa31.57■■■□□ 2.64
TRA2A-206ENST00000482395 SCAF11Q99590 1463 aaKnown RBP31.53■■■□□ 2.64
TRA2A-206ENST00000482395 CPS1P31327 1500 aa31.52■■■□□ 2.64
TRA2A-206ENST00000482395 SLC52A1Q9NWF4 448 aa31.51■■■□□ 2.63
TRA2A-206ENST00000482395 E9PCH4 1651 aa31.51■■■□□ 2.63
TRA2A-206ENST00000482395 ADGRB3O60242 1522 aa31.5■■■□□ 2.63
TRA2A-206ENST00000482395 STAG3Q9UJ98 1225 aa31.5■■■□□ 2.63
TRA2A-206ENST00000482395 IDI1Q13907 227 aa31.48■■■□□ 2.63
TRA2A-206ENST00000482395 TMEM2Q9UHN6 1383 aa31.46■■■□□ 2.63
TRA2A-206ENST00000482395 EID1Q9Y6B2 187 aa31.46■■■□□ 2.63
TRA2A-206ENST00000482395 NUP155O75694 1391 aa31.45■■■□□ 2.63
TRA2A-206ENST00000482395 TXNDC2Q86VQ3 553 aa31.42■■■□□ 2.62
TRA2A-206ENST00000482395 LTKP29376 864 aa31.4■■■□□ 2.62
TRA2A-206ENST00000482395 MYO5BQ9ULV0 1848 aa31.39■■■□□ 2.62
TRA2A-206ENST00000482395 NAIPQ13075 1403 aa31.39■■■□□ 2.62
TRA2A-206ENST00000482395 TMEM131LA2VDJ0 1609 aa31.35■■■□□ 2.61
TRA2A-206ENST00000482395 HFM1A2PYH4 1435 aa31.35■■■□□ 2.61
TRA2A-206ENST00000482395 STRCP1A6NGW2 1772 aa31.33■■■□□ 2.61
TRA2A-206ENST00000482395 SPHKAPQ2M3C7 1700 aa31.33■■■□□ 2.61
TRA2A-206ENST00000482395 ZFYVE9O95405 1425 aa31.27■■■□□ 2.6
TRA2A-206ENST00000482395 HDGFP51858 240 aaKnown RBP31.27■■■□□ 2.6
TRA2A-206ENST00000482395 UBAP1LF5GYI3 381 aa31.26■■■□□ 2.59
TRA2A-206ENST00000482395 LRRC7Q96NW7 1537 aa31.24■■■□□ 2.59
TRA2A-206ENST00000482395 RIMS2Q9UQ26 1411 aa31.23■■■□□ 2.59
TRA2A-206ENST00000482395 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.2■■■□□ 2.59
TRA2A-206ENST00000482395 PLEKHG1Q9ULL1 1385 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 545.6 ms