RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
CPSF4-212ENST00000482251 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
CPSF4-212ENST00000482251 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
CPSF4-212ENST00000482251 DNMT1P26358 1616 aaKnown RBP16.36■□□□□ 0.21
CPSF4-212ENST00000482251 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
CPSF4-212ENST00000482251 ABCC5O15440 1437 aa16.36■□□□□ 0.21
CPSF4-212ENST00000482251 SHANK2Q9UPX8 1470 aa16.35■□□□□ 0.21
CPSF4-212ENST00000482251 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
CPSF4-212ENST00000482251 DAPK1P53355 1430 aa16.35■□□□□ 0.21
CPSF4-212ENST00000482251 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
CPSF4-212ENST00000482251 FAM135AQ9P2D6 1515 aa16.35■□□□□ 0.21
CPSF4-212ENST00000482251 WASHC2CQ9Y4E1 1318 aa16.34■□□□□ 0.21
CPSF4-212ENST00000482251 PZPP20742 1482 aa16.34■□□□□ 0.21
CPSF4-212ENST00000482251 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
CPSF4-212ENST00000482251 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
CPSF4-212ENST00000482251 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
CPSF4-212ENST00000482251 ABCC3O15438 1527 aa16.33■□□□□ 0.2
CPSF4-212ENST00000482251 DUOX2Q9NRD8 1548 aa16.33■□□□□ 0.2
CPSF4-212ENST00000482251 CEP152O94986 1710 aa16.33■□□□□ 0.2
CPSF4-212ENST00000482251 ZC3H13Q5T200 1668 aaKnown RBP16.32■□□□□ 0.2
CPSF4-212ENST00000482251 TNRQ92752 1358 aa16.31■□□□□ 0.2
CPSF4-212ENST00000482251 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
CPSF4-212ENST00000482251 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
CPSF4-212ENST00000482251 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
CPSF4-212ENST00000482251 PTPRTO14522 1441 aa16.29■□□□□ 0.2
CPSF4-212ENST00000482251 NCKAP5LQ9HCH0 1330 aa16.29■□□□□ 0.2
CPSF4-212ENST00000482251 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
CPSF4-212ENST00000482251 FAM50AQ14320 339 aaKnown RBP16.28■□□□□ 0.2
CPSF4-212ENST00000482251 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
CPSF4-212ENST00000482251 PLA2R1Q13018 1463 aa16.28■□□□□ 0.2
CPSF4-212ENST00000482251 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
CPSF4-212ENST00000482251 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-212ENST00000482251 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
CPSF4-212ENST00000482251 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
CPSF4-212ENST00000482251 PPARGC1BQ86YN6 1023 aaKnown RBP16.24■□□□□ 0.19
CPSF4-212ENST00000482251 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
CPSF4-212ENST00000482251 POLR1AO95602 1720 aaPredicted RBP16.24■□□□□ 0.19
CPSF4-212ENST00000482251 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
CPSF4-212ENST00000482251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
CPSF4-212ENST00000482251 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
CPSF4-212ENST00000482251 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
CPSF4-212ENST00000482251 NLRP1Q9C000 1473 aa16.22■□□□□ 0.19
CPSF4-212ENST00000482251 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
CPSF4-212ENST00000482251 NEURL4Q96JN8 1562 aa16.21■□□□□ 0.18
CPSF4-212ENST00000482251 PKD2Q13563 968 aa16.2■□□□□ 0.18
CPSF4-212ENST00000482251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
CPSF4-212ENST00000482251 ADGRL2O95490 1459 aa16.2■□□□□ 0.18
CPSF4-212ENST00000482251 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-212ENST00000482251 KANK1Q14678 1352 aa16.16■□□□□ 0.18
CPSF4-212ENST00000482251 UBR1Q8IWV7 1749 aa16.15■□□□□ 0.18
CPSF4-212ENST00000482251 VWDEQ8N2E2 1590 aa16.15■□□□□ 0.18
CPSF4-212ENST00000482251 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
CPSF4-212ENST00000482251 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
CPSF4-212ENST00000482251 ITGAEP38570 1179 aa16.13■□□□□ 0.17
CPSF4-212ENST00000482251 EFCAB6Q5THR3 1501 aa16.13■□□□□ 0.17
CPSF4-212ENST00000482251 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
CPSF4-212ENST00000482251 LMTK2Q8IWU2 1503 aa16.12■□□□□ 0.17
CPSF4-212ENST00000482251 PIK3C2BO00750 1634 aa16.12■□□□□ 0.17
CPSF4-212ENST00000482251 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
CPSF4-212ENST00000482251 NPHP4O75161 1426 aaPredicted RBP16.11■□□□□ 0.17
CPSF4-212ENST00000482251 ANKLE2Q86XL3 938 aa16.11■□□□□ 0.17
CPSF4-212ENST00000482251 SYNMO15061 1565 aa16.1■□□□□ 0.17
CPSF4-212ENST00000482251 IQSEC2Q5JU85 1478 aa16.09■□□□□ 0.17
CPSF4-212ENST00000482251 UNC13BO14795 1591 aa16.09■□□□□ 0.17
CPSF4-212ENST00000482251 MED14O60244 1454 aa16.07■□□□□ 0.16
CPSF4-212ENST00000482251 TET3O43151 1660 aa16.06■□□□□ 0.16
CPSF4-212ENST00000482251 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
CPSF4-212ENST00000482251 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
CPSF4-212ENST00000482251 SLIT1O75093 1534 aa16.04■□□□□ 0.16
CPSF4-212ENST00000482251 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
CPSF4-212ENST00000482251 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
CPSF4-212ENST00000482251 ADGRB3O60242 1522 aa16.04■□□□□ 0.16
CPSF4-212ENST00000482251 CPS1P31327 1500 aa16.04■□□□□ 0.16
CPSF4-212ENST00000482251 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
CPSF4-212ENST00000482251 NOS1P29475 1434 aa16.03■□□□□ 0.16
CPSF4-212ENST00000482251 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CPSF4-212ENST00000482251 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.16
CPSF4-212ENST00000482251 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
CPSF4-212ENST00000482251 LTKP29376 864 aa16.01■□□□□ 0.15
CPSF4-212ENST00000482251 IDI1Q13907 227 aa16.01■□□□□ 0.15
CPSF4-212ENST00000482251 RPRD2Q5VT52 1461 aaKnown RBP16.01■□□□□ 0.15
CPSF4-212ENST00000482251 E9PCH4 1651 aa16.01■□□□□ 0.15
CPSF4-212ENST00000482251 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
CPSF4-212ENST00000482251 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
CPSF4-212ENST00000482251 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
CPSF4-212ENST00000482251 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
CPSF4-212ENST00000482251 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
CPSF4-212ENST00000482251 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-212ENST00000482251 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
CPSF4-212ENST00000482251 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
CPSF4-212ENST00000482251 NUP155O75694 1391 aa15.96■□□□□ 0.15
CPSF4-212ENST00000482251 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CPSF4-212ENST00000482251 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
CPSF4-212ENST00000482251 TMEM131LA2VDJ0 1609 aa15.94■□□□□ 0.14
CPSF4-212ENST00000482251 SLC52A1Q9NWF4 448 aa15.93■□□□□ 0.14
CPSF4-212ENST00000482251 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
CPSF4-212ENST00000482251 ALKQ9UM73 1620 aa15.91■□□□□ 0.14
CPSF4-212ENST00000482251 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
CPSF4-212ENST00000482251 ZFYVE9O95405 1425 aa15.9■□□□□ 0.14
CPSF4-212ENST00000482251 NAIPQ13075 1403 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms