RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CLSPNQ9HAW4 1339 aa18.47■□□□□ 0.55
IFT88-206ENST00000482172 A2MP01023 1474 aa18.46■□□□□ 0.55
IFT88-206ENST00000482172 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
IFT88-206ENST00000482172 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
IFT88-206ENST00000482172 UNC13BO14795 1591 aa18.44■□□□□ 0.54
IFT88-206ENST00000482172 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
IFT88-206ENST00000482172 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
IFT88-206ENST00000482172 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
IFT88-206ENST00000482172 ATP10AO60312 1499 aa18.42■□□□□ 0.54
IFT88-206ENST00000482172 BCORL1Q5H9F3 1711 aa18.42■□□□□ 0.54
IFT88-206ENST00000482172 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
IFT88-206ENST00000482172 NUP155O75694 1391 aa18.4■□□□□ 0.54
IFT88-206ENST00000482172 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.54
IFT88-206ENST00000482172 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
IFT88-206ENST00000482172 PZPP20742 1482 aa18.39■□□□□ 0.53
IFT88-206ENST00000482172 KIF3BO15066 747 aa18.37■□□□□ 0.53
IFT88-206ENST00000482172 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
IFT88-206ENST00000482172 AGLP35573 1532 aa18.36■□□□□ 0.53
IFT88-206ENST00000482172 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
IFT88-206ENST00000482172 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
IFT88-206ENST00000482172 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
IFT88-206ENST00000482172 PRDM15P57071 1507 aaPredicted RBP18.34■□□□□ 0.53
IFT88-206ENST00000482172 FAM135AQ9P2D6 1515 aa18.34■□□□□ 0.53
IFT88-206ENST00000482172 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
IFT88-206ENST00000482172 KANK1Q14678 1352 aa18.33■□□□□ 0.53
IFT88-206ENST00000482172 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
IFT88-206ENST00000482172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
IFT88-206ENST00000482172 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
IFT88-206ENST00000482172 PKD2Q13563 968 aa18.28■□□□□ 0.52
IFT88-206ENST00000482172 TET3O43151 1660 aa18.26■□□□□ 0.51
IFT88-206ENST00000482172 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
IFT88-206ENST00000482172 GGT6Q6P531 493 aa18.25■□□□□ 0.51
IFT88-206ENST00000482172 ZC3H13Q5T200 1668 aaKnown RBP18.24■□□□□ 0.51
IFT88-206ENST00000482172 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
IFT88-206ENST00000482172 ABCC3O15438 1527 aa18.22■□□□□ 0.51
IFT88-206ENST00000482172 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
IFT88-206ENST00000482172 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
IFT88-206ENST00000482172 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
IFT88-206ENST00000482172 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
IFT88-206ENST00000482172 E9PCH4 1651 aa18.19■□□□□ 0.5
IFT88-206ENST00000482172 CEP152O94986 1710 aa18.19■□□□□ 0.5
IFT88-206ENST00000482172 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
IFT88-206ENST00000482172 SIN3AQ96ST3 1273 aa18.17■□□□□ 0.5
IFT88-206ENST00000482172 PTPRTO14522 1441 aa18.16■□□□□ 0.5
IFT88-206ENST00000482172 CAMSAP1Q5T5Y3 1602 aa18.16■□□□□ 0.5
IFT88-206ENST00000482172 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
IFT88-206ENST00000482172 PLA2R1Q13018 1463 aa18.14■□□□□ 0.5
IFT88-206ENST00000482172 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
IFT88-206ENST00000482172 NPATQ14207 1427 aa18.13■□□□□ 0.49
IFT88-206ENST00000482172 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
IFT88-206ENST00000482172 TRPM2O94759 1503 aa18.12■□□□□ 0.49
IFT88-206ENST00000482172 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
IFT88-206ENST00000482172 CCDC144AA2RUR9 1427 aa18.11■□□□□ 0.49
IFT88-206ENST00000482172 MLECQ14165 292 aa18.1■□□□□ 0.49
IFT88-206ENST00000482172 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
IFT88-206ENST00000482172 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
IFT88-206ENST00000482172 CLTCQ00610 1675 aaKnown RBP18.09■□□□□ 0.49
IFT88-206ENST00000482172 NOS1P29475 1434 aa18.08■□□□□ 0.49
IFT88-206ENST00000482172 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
IFT88-206ENST00000482172 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
IFT88-206ENST00000482172 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
IFT88-206ENST00000482172 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
IFT88-206ENST00000482172 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
IFT88-206ENST00000482172 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
IFT88-206ENST00000482172 SPATA31D1Q6ZQQ2 1576 aa18.01■□□□□ 0.47
IFT88-206ENST00000482172 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
IFT88-206ENST00000482172 FER1L4A9Z1Z3 1794 aa18.01■□□□□ 0.47
IFT88-206ENST00000482172 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
IFT88-206ENST00000482172 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
IFT88-206ENST00000482172 PIK3C2BO00750 1634 aa18■□□□□ 0.47
IFT88-206ENST00000482172 SYNMO15061 1565 aa18■□□□□ 0.47
IFT88-206ENST00000482172 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
IFT88-206ENST00000482172 SPATA31E1Q6ZUB1 1445 aa17.99■□□□□ 0.47
IFT88-206ENST00000482172 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
IFT88-206ENST00000482172 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
IFT88-206ENST00000482172 KIF1BO60333 1816 aa17.96■□□□□ 0.47
IFT88-206ENST00000482172 FBXO31Q5XUX0 539 aaPredicted RBP17.96■□□□□ 0.47
IFT88-206ENST00000482172 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
IFT88-206ENST00000482172 UGGT1Q9NYU2 1555 aa17.96■□□□□ 0.46
IFT88-206ENST00000482172 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
IFT88-206ENST00000482172 C3P01024 1663 aa17.93■□□□□ 0.46
IFT88-206ENST00000482172 ADGRB3O60242 1522 aa17.93■□□□□ 0.46
IFT88-206ENST00000482172 IDI1Q13907 227 aa17.92■□□□□ 0.46
IFT88-206ENST00000482172 TNRQ92752 1358 aa17.91■□□□□ 0.46
IFT88-206ENST00000482172 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
IFT88-206ENST00000482172 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
IFT88-206ENST00000482172 RPGRIP1LQ68CZ1 1315 aa17.9■□□□□ 0.46
IFT88-206ENST00000482172 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
IFT88-206ENST00000482172 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
IFT88-206ENST00000482172 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
IFT88-206ENST00000482172 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
IFT88-206ENST00000482172 KDM5AP29375 1690 aaKnown RBP17.87■□□□□ 0.45
IFT88-206ENST00000482172 CEBPAP49715 358 aaPredicted RBP17.86■□□□□ 0.45
IFT88-206ENST00000482172 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
IFT88-206ENST00000482172 MYOM2P54296 1465 aa17.85■□□□□ 0.45
IFT88-206ENST00000482172 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
IFT88-206ENST00000482172 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
IFT88-206ENST00000482172 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
IFT88-206ENST00000482172 ZNF326Q5BKZ1 582 aaKnown RBP17.83■□□□□ 0.44
IFT88-206ENST00000482172 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms