RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 UNC13BO14795 1591 aa28.92■■■□□ 2.22
SEMA4D-218ENST00000482128 KANK1Q14678 1352 aa28.92■■■□□ 2.22
SEMA4D-218ENST00000482128 SIGLEC1Q9BZZ2 1709 aa28.91■■■□□ 2.22
SEMA4D-218ENST00000482128 DEPDC5O75140 1603 aa28.91■■■□□ 2.22
SEMA4D-218ENST00000482128 GGT6Q6P531 493 aa28.91■■■□□ 2.22
SEMA4D-218ENST00000482128 TRIM52Q96A61 297 aa28.91■■■□□ 2.22
SEMA4D-218ENST00000482128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.9■■■□□ 2.22
SEMA4D-218ENST00000482128 PRDM15P57071 1507 aaPredicted RBP28.89■■■□□ 2.22
SEMA4D-218ENST00000482128 NUP155O75694 1391 aa28.88■■■□□ 2.21
SEMA4D-218ENST00000482128 PPP6R1Q9UPN7 881 aa28.88■■■□□ 2.21
SEMA4D-218ENST00000482128 MLECQ14165 292 aa28.86■■■□□ 2.21
SEMA4D-218ENST00000482128 KDM5DQ9BY66 1539 aa28.85■■■□□ 2.21
SEMA4D-218ENST00000482128 MROH1Q8NDA8 1641 aa28.85■■■□□ 2.21
SEMA4D-218ENST00000482128 FAM135AQ9P2D6 1515 aa28.84■■■□□ 2.21
SEMA4D-218ENST00000482128 WASHC2CQ9Y4E1 1318 aa28.81■■■□□ 2.2
SEMA4D-218ENST00000482128 ESF1Q9H501 851 aaKnown RBP28.81■■■□□ 2.2
SEMA4D-218ENST00000482128 IQGAP3Q86VI3 1631 aa28.8■■■□□ 2.2
SEMA4D-218ENST00000482128 VWDEQ8N2E2 1590 aa28.8■■■□□ 2.2
SEMA4D-218ENST00000482128 ZC3H13Q5T200 1668 aaKnown RBP28.77■■■□□ 2.2
SEMA4D-218ENST00000482128 ABCC3O15438 1527 aa28.76■■■□□ 2.19
SEMA4D-218ENST00000482128 LMTK2Q8IWU2 1503 aa28.76■■■□□ 2.19
SEMA4D-218ENST00000482128 SLC4A1APQ9BWU0 796 aaKnown RBP28.76■■■□□ 2.19
SEMA4D-218ENST00000482128 PZPP20742 1482 aa28.76■■■□□ 2.19
SEMA4D-218ENST00000482128 CNTLNQ9NXG0 1405 aa28.75■■■□□ 2.19
SEMA4D-218ENST00000482128 MPHOSPH9Q99550 1183 aa28.73■■■□□ 2.19
SEMA4D-218ENST00000482128 TET3O43151 1660 aa28.7■■■□□ 2.18
SEMA4D-218ENST00000482128 CEP152O94986 1710 aa28.69■■■□□ 2.18
SEMA4D-218ENST00000482128 EFCAB6Q5THR3 1501 aa28.67■■■□□ 2.18
SEMA4D-218ENST00000482128 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
SEMA4D-218ENST00000482128 FER1L4A9Z1Z3 1794 aa28.66■■■□□ 2.18
SEMA4D-218ENST00000482128 ADAMTSL3P82987 1691 aa28.66■■■□□ 2.18
SEMA4D-218ENST00000482128 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
SEMA4D-218ENST00000482128 DHX57Q6P158 1386 aaKnown RBP28.65■■■□□ 2.18
SEMA4D-218ENST00000482128 PKD2Q13563 968 aa28.65■■■□□ 2.18
SEMA4D-218ENST00000482128 ARHGAP31Q2M1Z3 1444 aa28.64■■■□□ 2.18
SEMA4D-218ENST00000482128 MADDQ8WXG6 1647 aa28.63■■■□□ 2.17
SEMA4D-218ENST00000482128 RPRD2Q5VT52 1461 aaKnown RBP28.63■■■□□ 2.17
SEMA4D-218ENST00000482128 MROH2AA6NES4 1674 aa28.62■■■□□ 2.17
SEMA4D-218ENST00000482128 ZMYM3Q14202 1370 aa28.61■■■□□ 2.17
SEMA4D-218ENST00000482128 NPATQ14207 1427 aa28.59■■■□□ 2.17
SEMA4D-218ENST00000482128 E9PCH4 1651 aa28.57■■■□□ 2.16
SEMA4D-218ENST00000482128 RIMS1Q86UR5 1692 aaKnown RBP28.56■■■□□ 2.16
SEMA4D-218ENST00000482128 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
SEMA4D-218ENST00000482128 FOXD1Q16676 465 aa28.53■■■□□ 2.16
SEMA4D-218ENST00000482128 ERVK-7P63135 1459 aa28.49■■■□□ 2.15
SEMA4D-218ENST00000482128 PTPRTO14522 1441 aa28.49■■■□□ 2.15
SEMA4D-218ENST00000482128 CLSPNQ9HAW4 1339 aa28.48■■■□□ 2.15
SEMA4D-218ENST00000482128 C3P01024 1663 aa28.48■■■□□ 2.15
SEMA4D-218ENST00000482128 PTPRMP28827 1452 aa28.47■■■□□ 2.15
SEMA4D-218ENST00000482128 NOS1P29475 1434 aa28.47■■■□□ 2.15
SEMA4D-218ENST00000482128 ANKRD30BQ9BXX2 1392 aa28.47■■■□□ 2.15
SEMA4D-218ENST00000482128 SPATA31D1Q6ZQQ2 1576 aa28.45■■■□□ 2.15
SEMA4D-218ENST00000482128 PREX1Q8TCU6 1659 aa28.45■■■□□ 2.15
SEMA4D-218ENST00000482128 TRPM2O94759 1503 aa28.45■■■□□ 2.15
SEMA4D-218ENST00000482128 KDM4FA0A1W2PPD8 638 aa28.45■■■□□ 2.14
SEMA4D-218ENST00000482128 CEBPAP49715 358 aaPredicted RBP28.45■■■□□ 2.14
SEMA4D-218ENST00000482128 FBXO31Q5XUX0 539 aaPredicted RBP28.45■■■□□ 2.14
SEMA4D-218ENST00000482128 SPHKAPQ2M3C7 1700 aa28.45■■■□□ 2.14
SEMA4D-218ENST00000482128 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
SEMA4D-218ENST00000482128 PLA2R1Q13018 1463 aa28.42■■■□□ 2.14
SEMA4D-218ENST00000482128 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
SEMA4D-218ENST00000482128 TNRQ92752 1358 aa28.41■■■□□ 2.14
SEMA4D-218ENST00000482128 SLC52A1Q9NWF4 448 aa28.39■■■□□ 2.14
SEMA4D-218ENST00000482128 SYNMO15061 1565 aa28.37■■■□□ 2.13
SEMA4D-218ENST00000482128 CFAP65Q6ZU64 1925 aaKnown RBP28.35■■■□□ 2.13
SEMA4D-218ENST00000482128 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
SEMA4D-218ENST00000482128 PIK3C2BO00750 1634 aa28.31■■■□□ 2.12
SEMA4D-218ENST00000482128 CLTCL1P53675 1640 aa28.31■■■□□ 2.12
SEMA4D-218ENST00000482128 UGGT1Q9NYU2 1555 aa28.3■■■□□ 2.12
SEMA4D-218ENST00000482128 IDI1Q13907 227 aa28.28■■■□□ 2.12
SEMA4D-218ENST00000482128 SIN3AQ96ST3 1273 aa28.28■■■□□ 2.12
SEMA4D-218ENST00000482128 NEUROD1Q13562 356 aa28.27■■■□□ 2.12
SEMA4D-218ENST00000482128 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
SEMA4D-218ENST00000482128 MYO3AQ8NEV4 1616 aa28.25■■■□□ 2.11
SEMA4D-218ENST00000482128 CHGAP10645 457 aaKnown RBP28.23■■■□□ 2.11
SEMA4D-218ENST00000482128 UHRF1BP1Q6BDS2 1440 aa28.22■■■□□ 2.11
SEMA4D-218ENST00000482128 A2ML1A8K2U0 1454 aa28.21■■■□□ 2.11
SEMA4D-218ENST00000482128 SETD1BQ9UPS6 1966 aaKnown RBP28.21■■■□□ 2.11
SEMA4D-218ENST00000482128 ADGRB3O60242 1522 aa28.21■■■□□ 2.11
SEMA4D-218ENST00000482128 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.11
SEMA4D-218ENST00000482128 KIF1BO60333 1816 aa28.2■■■□□ 2.1
SEMA4D-218ENST00000482128 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
SEMA4D-218ENST00000482128 TONSLQ96HA7 1378 aa28.18■■■□□ 2.1
SEMA4D-218ENST00000482128 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
SEMA4D-218ENST00000482128 KDM5AP29375 1690 aaKnown RBP28.16■■■□□ 2.1
SEMA4D-218ENST00000482128 TMEM131LA2VDJ0 1609 aa28.15■■■□□ 2.1
SEMA4D-218ENST00000482128 ZNF142P52746 1687 aaPredicted RBP28.15■■■□□ 2.1
SEMA4D-218ENST00000482128 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
SEMA4D-218ENST00000482128 TIMELESSQ9UNS1 1208 aa28.14■■■□□ 2.1
SEMA4D-218ENST00000482128 RGL3Q3MIN7 710 aa28.13■■■□□ 2.09
SEMA4D-218ENST00000482128 THEMISQ8N1K5 641 aaPredicted RBP28.12■■■□□ 2.09
SEMA4D-218ENST00000482128 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
SEMA4D-218ENST00000482128 RPGRIP1LQ68CZ1 1315 aa28.11■■■□□ 2.09
SEMA4D-218ENST00000482128 HDGFP51858 240 aaKnown RBP28.05■■■□□ 2.08
SEMA4D-218ENST00000482128 L3MBTL2Q969R5 705 aa28.05■■■□□ 2.08
SEMA4D-218ENST00000482128 STAC3Q96MF2 364 aa28.05■■■□□ 2.08
SEMA4D-218ENST00000482128 TMEM2Q9UHN6 1383 aa28.05■■■□□ 2.08
SEMA4D-218ENST00000482128 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
SEMA4D-218ENST00000482128 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
SEMA4D-218ENST00000482128 DCAF11Q8TEB1 546 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms