RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 SUPT16HQ9Y5B9 1047 aaKnown RBP14.49□□□□□ -0.09
TRIM27-205ENST00000481474 PIP4K2BP78356 416 aa14.49□□□□□ -0.09
TRIM27-205ENST00000481474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIM27-205ENST00000481474 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
TRIM27-205ENST00000481474 AMPHP49418 695 aa14.48□□□□□ -0.09
TRIM27-205ENST00000481474 WWC2Q6AWC2 1192 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
TRIM27-205ENST00000481474 PLIN1O60240 522 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 CA8P35219 290 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 ITPRIPQ8IWB1 547 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 TTC16Q8NEE8 873 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
TRIM27-205ENST00000481474 AMOTL1Q8IY63 956 aa14.47□□□□□ -0.09
TRIM27-205ENST00000481474 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
TRIM27-205ENST00000481474 CHMP4CQ96CF2 233 aa14.46□□□□□ -0.09
TRIM27-205ENST00000481474 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
TRIM27-205ENST00000481474 CCDC27Q2M243 656 aa14.45□□□□□ -0.1
TRIM27-205ENST00000481474 TMEM87AQ8NBN3 555 aa14.45□□□□□ -0.1
TRIM27-205ENST00000481474 TSR1Q2NL82 804 aaKnown RBP14.44□□□□□ -0.1
TRIM27-205ENST00000481474 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
TRIM27-205ENST00000481474 ATP2B2Q01814 1243 aa14.44□□□□□ -0.1
TRIM27-205ENST00000481474 WDR78Q5VTH9 848 aa14.44□□□□□ -0.1
TRIM27-205ENST00000481474 PSMD1Q99460 953 aa14.43□□□□□ -0.1
TRIM27-205ENST00000481474 STK11IPQ8N1F8 1099 aa14.43□□□□□ -0.1
TRIM27-205ENST00000481474 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
TRIM27-205ENST00000481474 CDCA8Q53HL2 280 aa14.42□□□□□ -0.1
TRIM27-205ENST00000481474 RSPH4AQ5TD94 716 aa14.41□□□□□ -0.1
TRIM27-205ENST00000481474 H3BQV1 296 aa14.41□□□□□ -0.1
TRIM27-205ENST00000481474 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
TRIM27-205ENST00000481474 DEKP35659 375 aaKnown RBP14.41□□□□□ -0.1
TRIM27-205ENST00000481474 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
TRIM27-205ENST00000481474 EIF2S2P20042 333 aaKnown RBP14.4□□□□□ -0.1
TRIM27-205ENST00000481474 HSP90AB2PQ58FF8 381 aa14.4□□□□□ -0.1
TRIM27-205ENST00000481474 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
TRIM27-205ENST00000481474 SLKQ9H2G2 1235 aaPredicted RBP14.4□□□□□ -0.1
TRIM27-205ENST00000481474 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
TRIM27-205ENST00000481474 U2AF1L5P0DN76 240 aaPredicted RBP14.39□□□□□ -0.11
TRIM27-205ENST00000481474 U2AF1Q01081 240 aaKnown RBP eCLIP14.39□□□□□ -0.111e-10■■■■□ 24.2
TRIM27-205ENST00000481474 CCDC34Q96HJ3 373 aa14.39□□□□□ -0.11
TRIM27-205ENST00000481474 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
TRIM27-205ENST00000481474 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
TRIM27-205ENST00000481474 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
TRIM27-205ENST00000481474 TPM2P07951 284 aa14.38□□□□□ -0.11
TRIM27-205ENST00000481474 EID1Q9Y6B2 187 aa14.37□□□□□ -0.11
TRIM27-205ENST00000481474 SPAG9O60271 1321 aaKnown RBP14.37□□□□□ -0.11
TRIM27-205ENST00000481474 PLCD4Q9BRC7 762 aa14.37□□□□□ -0.11
TRIM27-205ENST00000481474 ANKRD62A6NC57 917 aa14.36□□□□□ -0.11
TRIM27-205ENST00000481474 ELL2O00472 640 aaPredicted RBP14.36□□□□□ -0.11
TRIM27-205ENST00000481474 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRIM27-205ENST00000481474 MFAP1P55081 439 aaKnown RBP14.36□□□□□ -0.11
TRIM27-205ENST00000481474 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
TRIM27-205ENST00000481474 ZNF592Q92610 1267 aa14.36□□□□□ -0.11
TRIM27-205ENST00000481474 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
TRIM27-205ENST00000481474 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
TRIM27-205ENST00000481474 FAM184AQ8NB25 1140 aa14.34□□□□□ -0.11
TRIM27-205ENST00000481474 HTATSF1O43719 755 aaKnown RBP14.34□□□□□ -0.11
TRIM27-205ENST00000481474 NFXL1Q6ZNB6 911 aa14.34□□□□□ -0.11
TRIM27-205ENST00000481474 C1orf141Q5JVX7 400 aa14.33□□□□□ -0.11
TRIM27-205ENST00000481474 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.11
TRIM27-205ENST00000481474 CLUAP1Q96AJ1 413 aa14.33□□□□□ -0.12
TRIM27-205ENST00000481474 EPS15P42566 896 aa14.32□□□□□ -0.12
TRIM27-205ENST00000481474 CBX1P83916 185 aa14.31□□□□□ -0.12
TRIM27-205ENST00000481474 SETQ01105 290 aaPredicted RBP14.31□□□□□ -0.12
TRIM27-205ENST00000481474 TTLL12Q14166 644 aaPredicted RBP14.31□□□□□ -0.12
TRIM27-205ENST00000481474 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
TRIM27-205ENST00000481474 MATR3P43243 847 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRIM27-205ENST00000481474 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
TRIM27-205ENST00000481474 CCDC146Q8IYE0 955 aa14.3□□□□□ -0.12
TRIM27-205ENST00000481474 TTC5Q8N0Z6 440 aa14.29□□□□□ -0.12
TRIM27-205ENST00000481474 NEFHP12036 1026 aa14.28□□□□□ -0.12
TRIM27-205ENST00000481474 KIF16BQ96L93 1317 aa14.28□□□□□ -0.12
TRIM27-205ENST00000481474 WWC3Q9ULE0 1092 aa14.28□□□□□ -0.12
TRIM27-205ENST00000481474 TIMELESSQ9UNS1 1208 aa14.28□□□□□ -0.12
TRIM27-205ENST00000481474 STAC3Q96MF2 364 aa14.28□□□□□ -0.12
TRIM27-205ENST00000481474 MIER1Q8N108 512 aa14.27□□□□□ -0.12
TRIM27-205ENST00000481474 NEBLO76041 1014 aa14.27□□□□□ -0.12
TRIM27-205ENST00000481474 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
TRIM27-205ENST00000481474 MS4A1P11836 297 aa14.27□□□□□ -0.13
TRIM27-205ENST00000481474 STRN4Q9NRL3 753 aa14.26□□□□□ -0.13
TRIM27-205ENST00000481474 E9PSI1 815 aa14.26□□□□□ -0.13
TRIM27-205ENST00000481474 TRIM29Q14134 588 aa14.26□□□□□ -0.13
TRIM27-205ENST00000481474 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
TRIM27-205ENST00000481474 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
TRIM27-205ENST00000481474 KANK1Q14678 1352 aa14.24□□□□□ -0.13
TRIM27-205ENST00000481474 PSME1Q06323 249 aa14.24□□□□□ -0.13
TRIM27-205ENST00000481474 TPM1P09493 284 aa14.23□□□□□ -0.13
TRIM27-205ENST00000481474 TMF1P82094 1093 aa14.23□□□□□ -0.13
TRIM27-205ENST00000481474 ZHX3Q9H4I2 956 aa14.23□□□□□ -0.13
TRIM27-205ENST00000481474 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
TRIM27-205ENST00000481474 SMC4Q9NTJ3 1288 aa14.23□□□□□ -0.13
TRIM27-205ENST00000481474 ZNF771Q7L3S4 317 aaPredicted RBP14.22□□□□□ -0.13
TRIM27-205ENST00000481474 RRP7AQ9Y3A4 280 aaKnown RBP14.22□□□□□ -0.13
TRIM27-205ENST00000481474 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
TRIM27-205ENST00000481474 ATP2B1P20020 1258 aa14.21□□□□□ -0.13
TRIM27-205ENST00000481474 ERICH2A1L162 156 aa14.21□□□□□ -0.13
TRIM27-205ENST00000481474 FOXD1Q16676 465 aa14.21□□□□□ -0.13
TRIM27-205ENST00000481474 CCDC70Q6NSX1 233 aa14.21□□□□□ -0.14
TRIM27-205ENST00000481474 OFD1O75665 1012 aa14.21□□□□□ -0.14
TRIM27-205ENST00000481474 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
TRIM27-205ENST00000481474 GOLGA6L19H0YKK7 550 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms