RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
KDM4A-204ENST00000481296 IQGAP3Q86VI3 1631 aa14.4□□□□□ -0.1
KDM4A-204ENST00000481296 FER1L4A9Z1Z3 1794 aa14.39□□□□□ -0.11
KDM4A-204ENST00000481296 DHX29Q7Z478 1369 aaKnown RBP14.38□□□□□ -0.11
KDM4A-204ENST00000481296 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
KDM4A-204ENST00000481296 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
KDM4A-204ENST00000481296 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
KDM4A-204ENST00000481296 TET3O43151 1660 aa14.36□□□□□ -0.11
KDM4A-204ENST00000481296 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
KDM4A-204ENST00000481296 FAM135AQ9P2D6 1515 aa14.35□□□□□ -0.11
KDM4A-204ENST00000481296 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
KDM4A-204ENST00000481296 MROH2AA6NES4 1674 aa14.33□□□□□ -0.11
KDM4A-204ENST00000481296 ABCC3O15438 1527 aa14.31□□□□□ -0.12
KDM4A-204ENST00000481296 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
KDM4A-204ENST00000481296 E9PCH4 1651 aa14.3□□□□□ -0.12
KDM4A-204ENST00000481296 ADAMTSL3P82987 1691 aa14.3□□□□□ -0.12
KDM4A-204ENST00000481296 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
KDM4A-204ENST00000481296 EFCAB6Q5THR3 1501 aa14.3□□□□□ -0.12
KDM4A-204ENST00000481296 KIF3BO15066 747 aa14.29□□□□□ -0.12
KDM4A-204ENST00000481296 SPHKAPQ2M3C7 1700 aa14.29□□□□□ -0.12
KDM4A-204ENST00000481296 PZPP20742 1482 aa14.28□□□□□ -0.12
KDM4A-204ENST00000481296 LMTK2Q8IWU2 1503 aa14.28□□□□□ -0.12
KDM4A-204ENST00000481296 KANK1Q14678 1352 aa14.27□□□□□ -0.12
KDM4A-204ENST00000481296 C3P01024 1663 aa14.26□□□□□ -0.13
KDM4A-204ENST00000481296 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
KDM4A-204ENST00000481296 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
KDM4A-204ENST00000481296 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
KDM4A-204ENST00000481296 CFAP65Q6ZU64 1925 aaKnown RBP14.25□□□□□ -0.13
KDM4A-204ENST00000481296 NUP155O75694 1391 aa14.24□□□□□ -0.13
KDM4A-204ENST00000481296 HRCP23327 699 aa14.24□□□□□ -0.13
KDM4A-204ENST00000481296 GGT6Q6P531 493 aa14.23□□□□□ -0.13
KDM4A-204ENST00000481296 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
KDM4A-204ENST00000481296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.23□□□□□ -0.13
KDM4A-204ENST00000481296 MLECQ14165 292 aa14.21□□□□□ -0.13
KDM4A-204ENST00000481296 CNTLNQ9NXG0 1405 aa14.21□□□□□ -0.13
KDM4A-204ENST00000481296 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
KDM4A-204ENST00000481296 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
KDM4A-204ENST00000481296 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
KDM4A-204ENST00000481296 TRPM2O94759 1503 aa14.17□□□□□ -0.14
KDM4A-204ENST00000481296 KIF1BO60333 1816 aa14.17□□□□□ -0.14
KDM4A-204ENST00000481296 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
KDM4A-204ENST00000481296 NPATQ14207 1427 aa14.16□□□□□ -0.14
KDM4A-204ENST00000481296 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
KDM4A-204ENST00000481296 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
KDM4A-204ENST00000481296 SYNMO15061 1565 aa14.16□□□□□ -0.14
KDM4A-204ENST00000481296 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
KDM4A-204ENST00000481296 PIK3C2BO00750 1634 aa14.15□□□□□ -0.14
KDM4A-204ENST00000481296 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
KDM4A-204ENST00000481296 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
KDM4A-204ENST00000481296 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
KDM4A-204ENST00000481296 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
KDM4A-204ENST00000481296 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
KDM4A-204ENST00000481296 MYO5BQ9ULV0 1848 aa14.14□□□□□ -0.15
KDM4A-204ENST00000481296 ZNF142P52746 1687 aaPredicted RBP14.12□□□□□ -0.15
KDM4A-204ENST00000481296 PKD2Q13563 968 aa14.11□□□□□ -0.15
KDM4A-204ENST00000481296 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
KDM4A-204ENST00000481296 PTPRMP28827 1452 aa14.1□□□□□ -0.15
KDM4A-204ENST00000481296 KDM5AP29375 1690 aaKnown RBP14.1□□□□□ -0.15
KDM4A-204ENST00000481296 NOS1P29475 1434 aa14.09□□□□□ -0.15
KDM4A-204ENST00000481296 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
KDM4A-204ENST00000481296 PTPRTO14522 1441 aa14.08□□□□□ -0.15
KDM4A-204ENST00000481296 FOXD1Q16676 465 aa14.08□□□□□ -0.16
KDM4A-204ENST00000481296 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
KDM4A-204ENST00000481296 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
KDM4A-204ENST00000481296 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
KDM4A-204ENST00000481296 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
KDM4A-204ENST00000481296 ADGRB3O60242 1522 aa14.06□□□□□ -0.16
KDM4A-204ENST00000481296 ANKRD30BQ9BXX2 1392 aa14.06□□□□□ -0.16
KDM4A-204ENST00000481296 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
KDM4A-204ENST00000481296 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
KDM4A-204ENST00000481296 CEP170BQ9Y4F5 1589 aaPredicted RBP14.05□□□□□ -0.16
KDM4A-204ENST00000481296 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
KDM4A-204ENST00000481296 SETD1BQ9UPS6 1966 aaKnown RBP14.04□□□□□ -0.16
KDM4A-204ENST00000481296 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
KDM4A-204ENST00000481296 PPLO60437 1756 aa14.04□□□□□ -0.16
KDM4A-204ENST00000481296 TNRQ92752 1358 aa14.03□□□□□ -0.16
KDM4A-204ENST00000481296 NLRP1Q9C000 1473 aa14.02□□□□□ -0.16
KDM4A-204ENST00000481296 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
KDM4A-204ENST00000481296 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
KDM4A-204ENST00000481296 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
KDM4A-204ENST00000481296 FBXO31Q5XUX0 539 aaPredicted RBP14□□□□□ -0.17
KDM4A-204ENST00000481296 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
KDM4A-204ENST00000481296 A2ML1A8K2U0 1454 aa13.98□□□□□ -0.17
KDM4A-204ENST00000481296 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
KDM4A-204ENST00000481296 UHRF1BP1Q6BDS2 1440 aa13.96□□□□□ -0.18
KDM4A-204ENST00000481296 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.18
KDM4A-204ENST00000481296 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
KDM4A-204ENST00000481296 SLC52A1Q9NWF4 448 aa13.94□□□□□ -0.18
KDM4A-204ENST00000481296 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
KDM4A-204ENST00000481296 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
KDM4A-204ENST00000481296 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
KDM4A-204ENST00000481296 LAMC1P11047 1609 aa13.91□□□□□ -0.18
KDM4A-204ENST00000481296 IDI1Q13907 227 aa13.91□□□□□ -0.18
KDM4A-204ENST00000481296 MYOM2P54296 1465 aa13.91□□□□□ -0.18
KDM4A-204ENST00000481296 SLIT1O75093 1534 aa13.9□□□□□ -0.18
KDM4A-204ENST00000481296 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
KDM4A-204ENST00000481296 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
KDM4A-204ENST00000481296 KIAA1210Q9ULL0 1709 aa13.89□□□□□ -0.19
KDM4A-204ENST00000481296 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
KDM4A-204ENST00000481296 ARHGAP23Q9P227 1491 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms