RNA–Protein interactions for RNA: ENST00000481233.3

RN7SL563P-201, Transcript of RNA, 7SL, cytoplasmic 563, pseudogene, humanhuman

BASIC

Gene RN7SL563P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL563P-201ENST00000481233 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
RN7SL563P-201ENST00000481233 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
RN7SL563P-201ENST00000481233 SYNMO15061 1565 aa13.03□□□□□ -0.32
RN7SL563P-201ENST00000481233 PLXNC1O60486 1568 aa13.03□□□□□ -0.32
RN7SL563P-201ENST00000481233 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
RN7SL563P-201ENST00000481233 IQGAP1P46940 1657 aa13.02□□□□□ -0.32
RN7SL563P-201ENST00000481233 UGGT1Q9NYU2 1555 aa13.02□□□□□ -0.33
RN7SL563P-201ENST00000481233 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
RN7SL563P-201ENST00000481233 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
RN7SL563P-201ENST00000481233 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
RN7SL563P-201ENST00000481233 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
RN7SL563P-201ENST00000481233 PZPP20742 1482 aa12.98□□□□□ -0.33
RN7SL563P-201ENST00000481233 NLRP1Q9C000 1473 aa12.98□□□□□ -0.33
RN7SL563P-201ENST00000481233 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
RN7SL563P-201ENST00000481233 RXRBP28702 533 aa12.97□□□□□ -0.33
RN7SL563P-201ENST00000481233 JCADQ9P266 1359 aa12.96□□□□□ -0.33
RN7SL563P-201ENST00000481233 KIF3BO15066 747 aa12.96□□□□□ -0.33
RN7SL563P-201ENST00000481233 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
RN7SL563P-201ENST00000481233 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
RN7SL563P-201ENST00000481233 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
RN7SL563P-201ENST00000481233 KIAA1107Q9UPP5 1409 aa12.95□□□□□ -0.34
RN7SL563P-201ENST00000481233 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
RN7SL563P-201ENST00000481233 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
RN7SL563P-201ENST00000481233 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
RN7SL563P-201ENST00000481233 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
RN7SL563P-201ENST00000481233 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
RN7SL563P-201ENST00000481233 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
RN7SL563P-201ENST00000481233 GPATCH8Q9UKJ3 1502 aaKnown RBP12.92□□□□□ -0.34
RN7SL563P-201ENST00000481233 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
RN7SL563P-201ENST00000481233 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 LTKP29376 864 aa12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 RBM33Q96EV2 1170 aaKnown RBP12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 ZC3H13Q5T200 1668 aaKnown RBP12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 ADGBQ8N7X0 1667 aa12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
RN7SL563P-201ENST00000481233 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
RN7SL563P-201ENST00000481233 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
RN7SL563P-201ENST00000481233 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
RN7SL563P-201ENST00000481233 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
RN7SL563P-201ENST00000481233 PLEKHH2Q8IVE3 1493 aa12.9□□□□□ -0.34
RN7SL563P-201ENST00000481233 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
RN7SL563P-201ENST00000481233 UBTFP17480 764 aaKnown RBP12.89□□□□□ -0.35
RN7SL563P-201ENST00000481233 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
RN7SL563P-201ENST00000481233 EEA1Q15075 1411 aa12.88□□□□□ -0.35
RN7SL563P-201ENST00000481233 LRP6O75581 1613 aa12.88□□□□□ -0.35
RN7SL563P-201ENST00000481233 SCAF11Q99590 1463 aaKnown RBP12.88□□□□□ -0.35
RN7SL563P-201ENST00000481233 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
RN7SL563P-201ENST00000481233 FOXD1Q16676 465 aa12.87□□□□□ -0.35
RN7SL563P-201ENST00000481233 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
RN7SL563P-201ENST00000481233 KCNA6P17658 529 aa12.86□□□□□ -0.35
RN7SL563P-201ENST00000481233 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
RN7SL563P-201ENST00000481233 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
RN7SL563P-201ENST00000481233 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 ZNF644Q9H582 1327 aaPredicted RBP12.85□□□□□ -0.35
RN7SL563P-201ENST00000481233 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
RN7SL563P-201ENST00000481233 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
RN7SL563P-201ENST00000481233 MAP3K1Q13233 1512 aa12.82□□□□□ -0.36
RN7SL563P-201ENST00000481233 MSH6P52701 1360 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 QTRT2Q9H974 415 aaKnown RBP12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 AFF2P51816 1311 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
RN7SL563P-201ENST00000481233 MBD5Q9P267 1494 aa12.8□□□□□ -0.36
RN7SL563P-201ENST00000481233 SLC26A8Q96RN1 970 aa12.8□□□□□ -0.36
RN7SL563P-201ENST00000481233 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
RN7SL563P-201ENST00000481233 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
RN7SL563P-201ENST00000481233 SLIT1O75093 1534 aa12.79□□□□□ -0.36
RN7SL563P-201ENST00000481233 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
RN7SL563P-201ENST00000481233 RGS12O14924 1447 aa12.79□□□□□ -0.36
RN7SL563P-201ENST00000481233 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
RN7SL563P-201ENST00000481233 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
RN7SL563P-201ENST00000481233 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
RN7SL563P-201ENST00000481233 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
RN7SL563P-201ENST00000481233 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
RN7SL563P-201ENST00000481233 ABCC3O15438 1527 aa12.73□□□□□ -0.37
RN7SL563P-201ENST00000481233 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
RN7SL563P-201ENST00000481233 C8orf37Q96NL8 207 aa12.73□□□□□ -0.37
RN7SL563P-201ENST00000481233 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
RN7SL563P-201ENST00000481233 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
RN7SL563P-201ENST00000481233 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
RN7SL563P-201ENST00000481233 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
RN7SL563P-201ENST00000481233 BCANQ96GW7 911 aa12.71□□□□□ -0.37
RN7SL563P-201ENST00000481233 TET3O43151 1660 aa12.7□□□□□ -0.38
RN7SL563P-201ENST00000481233 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
RN7SL563P-201ENST00000481233 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
RN7SL563P-201ENST00000481233 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
RN7SL563P-201ENST00000481233 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
RN7SL563P-201ENST00000481233 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
RN7SL563P-201ENST00000481233 AHDC1Q5TGY3 1603 aaPredicted RBP12.69□□□□□ -0.38
RN7SL563P-201ENST00000481233 CCDC141Q6ZP82 1450 aa12.68□□□□□ -0.38
RN7SL563P-201ENST00000481233 FYCO1Q9BQS8 1478 aa12.68□□□□□ -0.38
RN7SL563P-201ENST00000481233 ATF3P18847 181 aa12.68□□□□□ -0.38
RN7SL563P-201ENST00000481233 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms