RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 DISP3Q9P2K9 1392 aa28.74■■■□□ 2.19
KCNMA1-220ENST00000481070 ARID4BQ4LE39 1312 aaPredicted RBP28.73■■■□□ 2.19
KCNMA1-220ENST00000481070 ANKRD50Q9ULJ7 1429 aa28.73■■■□□ 2.19
KCNMA1-220ENST00000481070 DHX29Q7Z478 1369 aaKnown RBP28.73■■■□□ 2.19
KCNMA1-220ENST00000481070 HSPA2P54652 639 aa28.71■■■□□ 2.19
KCNMA1-220ENST00000481070 RAB3GAP2Q9H2M9 1393 aa28.71■■■□□ 2.19
KCNMA1-220ENST00000481070 KIF3BO15066 747 aa28.67■■■□□ 2.18
KCNMA1-220ENST00000481070 ERBINQ96RT1 1412 aa28.67■■■□□ 2.18
KCNMA1-220ENST00000481070 SIGLEC1Q9BZZ2 1709 aa28.66■■■□□ 2.18
KCNMA1-220ENST00000481070 SPATA31D1Q6ZQQ2 1576 aa28.63■■■□□ 2.17
KCNMA1-220ENST00000481070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.63■■■□□ 2.17
KCNMA1-220ENST00000481070 FER1L4A9Z1Z3 1794 aa28.62■■■□□ 2.17
KCNMA1-220ENST00000481070 TRIM52Q96A61 297 aa28.62■■■□□ 2.17
KCNMA1-220ENST00000481070 REREQ9P2R6 1566 aa28.6■■■□□ 2.17
KCNMA1-220ENST00000481070 MLECQ14165 292 aa28.6■■■□□ 2.17
KCNMA1-220ENST00000481070 GGT6Q6P531 493 aa28.59■■■□□ 2.17
KCNMA1-220ENST00000481070 EIF2AK4Q9P2K8 1649 aaKnown RBP28.58■■■□□ 2.17
KCNMA1-220ENST00000481070 PREX1Q8TCU6 1659 aa28.57■■■□□ 2.16
KCNMA1-220ENST00000481070 AGLP35573 1532 aa28.53■■■□□ 2.16
KCNMA1-220ENST00000481070 NUP155O75694 1391 aa28.5■■■□□ 2.15
KCNMA1-220ENST00000481070 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
KCNMA1-220ENST00000481070 UNC13BO14795 1591 aa28.5■■■□□ 2.15
KCNMA1-220ENST00000481070 HRCP23327 699 aa28.49■■■□□ 2.15
KCNMA1-220ENST00000481070 RNF17Q9BXT8 1623 aaKnown RBP28.49■■■□□ 2.15
KCNMA1-220ENST00000481070 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
KCNMA1-220ENST00000481070 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
KCNMA1-220ENST00000481070 MROH1Q8NDA8 1641 aa28.47■■■□□ 2.15
KCNMA1-220ENST00000481070 KANK1Q14678 1352 aa28.45■■■□□ 2.14
KCNMA1-220ENST00000481070 PRDM15P57071 1507 aaPredicted RBP28.43■■■□□ 2.14
KCNMA1-220ENST00000481070 WASHC2CQ9Y4E1 1318 aa28.42■■■□□ 2.14
KCNMA1-220ENST00000481070 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
KCNMA1-220ENST00000481070 CEP152O94986 1710 aa28.4■■■□□ 2.14
KCNMA1-220ENST00000481070 PZPP20742 1482 aa28.4■■■□□ 2.14
KCNMA1-220ENST00000481070 FAM135AQ9P2D6 1515 aa28.39■■■□□ 2.14
KCNMA1-220ENST00000481070 MPHOSPH9Q99550 1183 aa28.39■■■□□ 2.14
KCNMA1-220ENST00000481070 IQGAP3Q86VI3 1631 aa28.38■■■□□ 2.13
KCNMA1-220ENST00000481070 KDM5DQ9BY66 1539 aa28.38■■■□□ 2.13
KCNMA1-220ENST00000481070 ESF1Q9H501 851 aaKnown RBP28.37■■■□□ 2.13
KCNMA1-220ENST00000481070 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
KCNMA1-220ENST00000481070 SETD1BQ9UPS6 1966 aaKnown RBP28.36■■■□□ 2.13
KCNMA1-220ENST00000481070 VWDEQ8N2E2 1590 aa28.36■■■□□ 2.13
KCNMA1-220ENST00000481070 ABCC3O15438 1527 aa28.34■■■□□ 2.13
KCNMA1-220ENST00000481070 FOXD1Q16676 465 aa28.34■■■□□ 2.13
KCNMA1-220ENST00000481070 CLTCQ00610 1675 aaKnown RBP28.34■■■□□ 2.13
KCNMA1-220ENST00000481070 DMRT2Q9Y5R5 561 aa28.33■■■□□ 2.13
KCNMA1-220ENST00000481070 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
KCNMA1-220ENST00000481070 PKD2Q13563 968 aa28.32■■■□□ 2.12
KCNMA1-220ENST00000481070 PPP6R1Q9UPN7 881 aa28.31■■■□□ 2.12
KCNMA1-220ENST00000481070 TET3O43151 1660 aa28.28■■■□□ 2.12
KCNMA1-220ENST00000481070 ZC3H13Q5T200 1668 aaKnown RBP28.28■■■□□ 2.12
KCNMA1-220ENST00000481070 CAMSAP1Q5T5Y3 1602 aa28.27■■■□□ 2.12
KCNMA1-220ENST00000481070 LMTK2Q8IWU2 1503 aa28.27■■■□□ 2.12
KCNMA1-220ENST00000481070 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
KCNMA1-220ENST00000481070 IQSEC2Q5JU85 1478 aa28.26■■■□□ 2.11
KCNMA1-220ENST00000481070 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.11
KCNMA1-220ENST00000481070 PTPRTO14522 1441 aa28.24■■■□□ 2.11
KCNMA1-220ENST00000481070 EFCAB6Q5THR3 1501 aa28.23■■■□□ 2.11
KCNMA1-220ENST00000481070 E9PCH4 1651 aa28.23■■■□□ 2.11
KCNMA1-220ENST00000481070 LTBP4Q8N2S1 1624 aa28.23■■■□□ 2.11
KCNMA1-220ENST00000481070 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
KCNMA1-220ENST00000481070 ZMYM3Q14202 1370 aa28.21■■■□□ 2.11
KCNMA1-220ENST00000481070 CNTLNQ9NXG0 1405 aa28.2■■■□□ 2.11
KCNMA1-220ENST00000481070 CEBPAP49715 358 aaPredicted RBP28.2■■■□□ 2.1
KCNMA1-220ENST00000481070 NPATQ14207 1427 aa28.19■■■□□ 2.1
KCNMA1-220ENST00000481070 FBXO31Q5XUX0 539 aaPredicted RBP28.17■■■□□ 2.1
KCNMA1-220ENST00000481070 C3P01024 1663 aa28.15■■■□□ 2.1
KCNMA1-220ENST00000481070 MROH2AA6NES4 1674 aa28.14■■■□□ 2.1
KCNMA1-220ENST00000481070 ARHGAP31Q2M1Z3 1444 aa28.13■■■□□ 2.09
KCNMA1-220ENST00000481070 RPRD2Q5VT52 1461 aaKnown RBP28.1■■■□□ 2.09
KCNMA1-220ENST00000481070 ANKRD30BQ9BXX2 1392 aa28.09■■■□□ 2.09
KCNMA1-220ENST00000481070 SIN3AQ96ST3 1273 aa28.08■■■□□ 2.09
KCNMA1-220ENST00000481070 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
KCNMA1-220ENST00000481070 PLA2R1Q13018 1463 aa28.08■■■□□ 2.09
KCNMA1-220ENST00000481070 ERVK-7P63135 1459 aa28.07■■■□□ 2.08
KCNMA1-220ENST00000481070 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
KCNMA1-220ENST00000481070 UGGT1Q9NYU2 1555 aa28.03■■■□□ 2.08
KCNMA1-220ENST00000481070 NOS1P29475 1434 aa28.03■■■□□ 2.08
KCNMA1-220ENST00000481070 SYNMO15061 1565 aa28.02■■■□□ 2.08
KCNMA1-220ENST00000481070 TRPM2O94759 1503 aa28.01■■■□□ 2.07
KCNMA1-220ENST00000481070 CCDC144AA2RUR9 1427 aa27.99■■■□□ 2.07
KCNMA1-220ENST00000481070 TNRQ92752 1358 aa27.99■■■□□ 2.07
KCNMA1-220ENST00000481070 CLTCL1P53675 1640 aa27.98■■■□□ 2.07
KCNMA1-220ENST00000481070 CHGAP10645 457 aaKnown RBP27.95■■■□□ 2.06
KCNMA1-220ENST00000481070 CLSPNQ9HAW4 1339 aa27.94■■■□□ 2.06
KCNMA1-220ENST00000481070 IDI1Q13907 227 aa27.94■■■□□ 2.06
KCNMA1-220ENST00000481070 SLC52A1Q9NWF4 448 aa27.91■■■□□ 2.06
KCNMA1-220ENST00000481070 PIK3C2BO00750 1634 aa27.89■■■□□ 2.06
KCNMA1-220ENST00000481070 RGL3Q3MIN7 710 aa27.88■■■□□ 2.05
KCNMA1-220ENST00000481070 STAG3Q9UJ98 1225 aa27.87■■■□□ 2.05
KCNMA1-220ENST00000481070 MED1Q15648 1581 aaPredicted RBP27.86■■■□□ 2.05
KCNMA1-220ENST00000481070 KIF1BO60333 1816 aa27.85■■■□□ 2.05
KCNMA1-220ENST00000481070 UBAP1LF5GYI3 381 aa27.84■■■□□ 2.05
KCNMA1-220ENST00000481070 MYO3AQ8NEV4 1616 aa27.84■■■□□ 2.05
KCNMA1-220ENST00000481070 ZNF142P52746 1687 aaPredicted RBP27.82■■■□□ 2.04
KCNMA1-220ENST00000481070 ZNF326Q5BKZ1 582 aaKnown RBP27.82■■■□□ 2.04
KCNMA1-220ENST00000481070 NLRP1Q9C000 1473 aa27.81■■■□□ 2.04
KCNMA1-220ENST00000481070 TONSLQ96HA7 1378 aa27.8■■■□□ 2.04
KCNMA1-220ENST00000481070 MYO5BQ9ULV0 1848 aa27.8■■■□□ 2.04
KCNMA1-220ENST00000481070 ZNF335Q9H4Z2 1342 aaPredicted RBP27.79■■■□□ 2.04
KCNMA1-220ENST00000481070 SPATA31E1Q6ZUB1 1445 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms