RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 DAPK1P53355 1430 aa26.42■■□□□ 1.82
HSPG2-209ENST00000480900 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
HSPG2-209ENST00000480900 DUOX2Q9NRD8 1548 aa26.41■■□□□ 1.82
HSPG2-209ENST00000480900 PTPRKQ15262 1439 aa26.39■■□□□ 1.81
HSPG2-209ENST00000480900 ZNF142P52746 1687 aaPredicted RBP26.36■■□□□ 1.81
HSPG2-209ENST00000480900 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
HSPG2-209ENST00000480900 STRCQ7RTU9 1775 aa26.35■■□□□ 1.81
HSPG2-209ENST00000480900 KIF15Q9NS87 1388 aa26.35■■□□□ 1.81
HSPG2-209ENST00000480900 ZC3H13Q5T200 1668 aaKnown RBP26.35■■□□□ 1.81
HSPG2-209ENST00000480900 MROH1Q8NDA8 1641 aa26.33■■□□□ 1.81
HSPG2-209ENST00000480900 WASHC2CQ9Y4E1 1318 aa26.33■■□□□ 1.81
HSPG2-209ENST00000480900 ERBINQ96RT1 1412 aa26.32■■□□□ 1.8
HSPG2-209ENST00000480900 PZPP20742 1482 aa26.32■■□□□ 1.8
HSPG2-209ENST00000480900 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
HSPG2-209ENST00000480900 ABCC3O15438 1527 aa26.29■■□□□ 1.8
HSPG2-209ENST00000480900 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
HSPG2-209ENST00000480900 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
HSPG2-209ENST00000480900 RRP7BPQ9NSQ0 103 aa26.28■■□□□ 1.8
HSPG2-209ENST00000480900 CEP152O94986 1710 aa26.28■■□□□ 1.8
HSPG2-209ENST00000480900 ADGRL2O95490 1459 aa26.27■■□□□ 1.8
HSPG2-209ENST00000480900 DEPDC5O75140 1603 aa26.26■■□□□ 1.79
HSPG2-209ENST00000480900 PRDM15P57071 1507 aaPredicted RBP26.26■■□□□ 1.79
HSPG2-209ENST00000480900 NCOA1Q15788 1441 aa26.25■■□□□ 1.79
HSPG2-209ENST00000480900 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
HSPG2-209ENST00000480900 CAMSAP1Q5T5Y3 1602 aa26.24■■□□□ 1.79
HSPG2-209ENST00000480900 DMRT2Q9Y5R5 561 aa26.22■■□□□ 1.79
HSPG2-209ENST00000480900 A2ML1A8K2U0 1454 aa26.22■■□□□ 1.79
HSPG2-209ENST00000480900 TNRQ92752 1358 aa26.21■■□□□ 1.79
HSPG2-209ENST00000480900 CFAP65Q6ZU64 1925 aaKnown RBP26.21■■□□□ 1.79
HSPG2-209ENST00000480900 FBXO31Q5XUX0 539 aaPredicted RBP26.2■■□□□ 1.78
HSPG2-209ENST00000480900 PLA2R1Q13018 1463 aa26.18■■□□□ 1.78
HSPG2-209ENST00000480900 PTPRTO14522 1441 aa26.18■■□□□ 1.78
HSPG2-209ENST00000480900 SPATA31D1Q6ZQQ2 1576 aa26.16■■□□□ 1.78
HSPG2-209ENST00000480900 PPARGC1BQ86YN6 1023 aaKnown RBP26.15■■□□□ 1.78
HSPG2-209ENST00000480900 NLRP1Q9C000 1473 aa26.15■■□□□ 1.78
HSPG2-209ENST00000480900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.14■■□□□ 1.78
HSPG2-209ENST00000480900 VWDEQ8N2E2 1590 aa26.13■■□□□ 1.77
HSPG2-209ENST00000480900 ERVK-7P63135 1459 aa26.13■■□□□ 1.77
HSPG2-209ENST00000480900 KANK1Q14678 1352 aa26.12■■□□□ 1.77
HSPG2-209ENST00000480900 ILDR1Q86SU0 546 aaPredicted RBP26.12■■□□□ 1.77
HSPG2-209ENST00000480900 ARHGAP31Q2M1Z3 1444 aa26.12■■□□□ 1.77
HSPG2-209ENST00000480900 ANKRD50Q9ULJ7 1429 aa26.1■■□□□ 1.77
HSPG2-209ENST00000480900 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
HSPG2-209ENST00000480900 ROCK1Q13464 1354 aa26.09■■□□□ 1.77
HSPG2-209ENST00000480900 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.77
HSPG2-209ENST00000480900 PKD2Q13563 968 aa26.08■■□□□ 1.77
HSPG2-209ENST00000480900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.77
HSPG2-209ENST00000480900 UGGT1Q9NYU2 1555 aa26.06■■□□□ 1.76
HSPG2-209ENST00000480900 NCKAP5LQ9HCH0 1330 aa26.05■■□□□ 1.76
HSPG2-209ENST00000480900 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
HSPG2-209ENST00000480900 FBXO41Q8TF61 875 aa26.02■■□□□ 1.76
HSPG2-209ENST00000480900 EFCAB6Q5THR3 1501 aa26.02■■□□□ 1.76
HSPG2-209ENST00000480900 UNC13BO14795 1591 aa26.02■■□□□ 1.76
HSPG2-209ENST00000480900 THEMISQ8N1K5 641 aaPredicted RBP26■■□□□ 1.75
HSPG2-209ENST00000480900 CERKQ8TCT0 537 aa26■■□□□ 1.75
HSPG2-209ENST00000480900 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
HSPG2-209ENST00000480900 NEURL4Q96JN8 1562 aa25.99■■□□□ 1.75
HSPG2-209ENST00000480900 TET3O43151 1660 aa25.98■■□□□ 1.75
HSPG2-209ENST00000480900 GCC2Q8IWJ2 1684 aa25.96■■□□□ 1.75
HSPG2-209ENST00000480900 LTBP4Q8N2S1 1624 aa25.96■■□□□ 1.75
HSPG2-209ENST00000480900 ITGAEP38570 1179 aa25.96■■□□□ 1.75
HSPG2-209ENST00000480900 RPRD2Q5VT52 1461 aaKnown RBP25.93■■□□□ 1.74
HSPG2-209ENST00000480900 ANKLE2Q86XL3 938 aa25.93■■□□□ 1.74
HSPG2-209ENST00000480900 KDM5AP29375 1690 aaKnown RBP25.93■■□□□ 1.74
HSPG2-209ENST00000480900 PIK3C2BO00750 1634 aa25.92■■□□□ 1.74
HSPG2-209ENST00000480900 SYNMO15061 1565 aa25.92■■□□□ 1.74
HSPG2-209ENST00000480900 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
HSPG2-209ENST00000480900 NOS1P29475 1434 aa25.91■■□□□ 1.74
HSPG2-209ENST00000480900 MED14O60244 1454 aa25.9■■□□□ 1.74
HSPG2-209ENST00000480900 IQGAP1P46940 1657 aa25.88■■□□□ 1.73
HSPG2-209ENST00000480900 SLIT1O75093 1534 aa25.86■■□□□ 1.73
HSPG2-209ENST00000480900 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
HSPG2-209ENST00000480900 E9PCH4 1651 aa25.86■■□□□ 1.73
HSPG2-209ENST00000480900 ZNF335Q9H4Z2 1342 aaPredicted RBP25.86■■□□□ 1.73
HSPG2-209ENST00000480900 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
HSPG2-209ENST00000480900 ARHGAP23Q9P227 1491 aa25.85■■□□□ 1.73
HSPG2-209ENST00000480900 SCAF11Q99590 1463 aaKnown RBP25.82■■□□□ 1.72
HSPG2-209ENST00000480900 IDI1Q13907 227 aa25.81■■□□□ 1.72
HSPG2-209ENST00000480900 ADGRB3O60242 1522 aa25.81■■□□□ 1.72
HSPG2-209ENST00000480900 NUP155O75694 1391 aa25.81■■□□□ 1.72
HSPG2-209ENST00000480900 SLC52A1Q9NWF4 448 aa25.8■■□□□ 1.72
HSPG2-209ENST00000480900 NAIPQ13075 1403 aa25.79■■□□□ 1.72
HSPG2-209ENST00000480900 STAG3Q9UJ98 1225 aa25.78■■□□□ 1.72
HSPG2-209ENST00000480900 MYO5BQ9ULV0 1848 aa25.78■■□□□ 1.72
HSPG2-209ENST00000480900 TMEM2Q9UHN6 1383 aa25.77■■□□□ 1.72
HSPG2-209ENST00000480900 CPS1P31327 1500 aa25.75■■□□□ 1.71
HSPG2-209ENST00000480900 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
HSPG2-209ENST00000480900 LTKP29376 864 aa25.74■■□□□ 1.71
HSPG2-209ENST00000480900 EID1Q9Y6B2 187 aa25.74■■□□□ 1.71
HSPG2-209ENST00000480900 TXNDC2Q86VQ3 553 aa25.73■■□□□ 1.71
HSPG2-209ENST00000480900 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
HSPG2-209ENST00000480900 SPHKAPQ2M3C7 1700 aa25.71■■□□□ 1.71
HSPG2-209ENST00000480900 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
HSPG2-209ENST00000480900 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
HSPG2-209ENST00000480900 RIMS2Q9UQ26 1411 aa25.59■■□□□ 1.69
HSPG2-209ENST00000480900 UBAP1LF5GYI3 381 aa25.56■■□□□ 1.68
HSPG2-209ENST00000480900 CHGAP10645 457 aaKnown RBP25.56■■□□□ 1.68
HSPG2-209ENST00000480900 HDGFP51858 240 aaKnown RBP25.56■■□□□ 1.68
HSPG2-209ENST00000480900 TRPM2O94759 1503 aa25.56■■□□□ 1.68
HSPG2-209ENST00000480900 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms