RNA–Protein interactions for RNA: ENST00000480289.1

ATP6V1C2-203, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 2

Gene ATP6V1C2, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-203ENST00000480289 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
ATP6V1C2-203ENST00000480289 HSPA2P54652 639 aa18.03■□□□□ 0.48
ATP6V1C2-203ENST00000480289 NPATQ14207 1427 aa18.03■□□□□ 0.48
ATP6V1C2-203ENST00000480289 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
ATP6V1C2-203ENST00000480289 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
ATP6V1C2-203ENST00000480289 SETD1BQ9UPS6 1966 aaKnown RBP18.02■□□□□ 0.47
ATP6V1C2-203ENST00000480289 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
ATP6V1C2-203ENST00000480289 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
ATP6V1C2-203ENST00000480289 PTPRKQ15262 1439 aa18■□□□□ 0.47
ATP6V1C2-203ENST00000480289 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
ATP6V1C2-203ENST00000480289 ERBINQ96RT1 1412 aa18■□□□□ 0.47
ATP6V1C2-203ENST00000480289 ADGRL2O95490 1459 aa18■□□□□ 0.47
ATP6V1C2-203ENST00000480289 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
ATP6V1C2-203ENST00000480289 KDM5DQ9BY66 1539 aa17.99■□□□□ 0.47
ATP6V1C2-203ENST00000480289 RNF17Q9BXT8 1623 aaKnown RBP17.99■□□□□ 0.47
ATP6V1C2-203ENST00000480289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.99■□□□□ 0.47
ATP6V1C2-203ENST00000480289 MROH1Q8NDA8 1641 aa17.95■□□□□ 0.46
ATP6V1C2-203ENST00000480289 FBXO31Q5XUX0 539 aaPredicted RBP17.95■□□□□ 0.46
ATP6V1C2-203ENST00000480289 ABCC3O15438 1527 aa17.94■□□□□ 0.46
ATP6V1C2-203ENST00000480289 PZPP20742 1482 aa17.94■□□□□ 0.46
ATP6V1C2-203ENST00000480289 RRBP1Q9P2E9 1410 aaKnown RBP17.93■□□□□ 0.46
ATP6V1C2-203ENST00000480289 ROCK1Q13464 1354 aa17.92■□□□□ 0.46
ATP6V1C2-203ENST00000480289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATP6V1C2-203ENST00000480289 PRDM15P57071 1507 aaPredicted RBP17.91■□□□□ 0.46
ATP6V1C2-203ENST00000480289 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
ATP6V1C2-203ENST00000480289 ITGAEP38570 1179 aa17.9■□□□□ 0.46
ATP6V1C2-203ENST00000480289 ZC3H13Q5T200 1668 aaKnown RBP17.9■□□□□ 0.46
ATP6V1C2-203ENST00000480289 DEPDC5O75140 1603 aa17.89■□□□□ 0.45
ATP6V1C2-203ENST00000480289 TNRQ92752 1358 aa17.89■□□□□ 0.45
ATP6V1C2-203ENST00000480289 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
ATP6V1C2-203ENST00000480289 KANK1Q14678 1352 aa17.88■□□□□ 0.45
ATP6V1C2-203ENST00000480289 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
ATP6V1C2-203ENST00000480289 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
ATP6V1C2-203ENST00000480289 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
ATP6V1C2-203ENST00000480289 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
ATP6V1C2-203ENST00000480289 A2ML1A8K2U0 1454 aa17.84■□□□□ 0.45
ATP6V1C2-203ENST00000480289 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
ATP6V1C2-203ENST00000480289 CEP152O94986 1710 aa17.84■□□□□ 0.45
ATP6V1C2-203ENST00000480289 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.45
ATP6V1C2-203ENST00000480289 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
ATP6V1C2-203ENST00000480289 STRCQ7RTU9 1775 aa17.83■□□□□ 0.44
ATP6V1C2-203ENST00000480289 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
ATP6V1C2-203ENST00000480289 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.44
ATP6V1C2-203ENST00000480289 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
ATP6V1C2-203ENST00000480289 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
ATP6V1C2-203ENST00000480289 PLA2R1Q13018 1463 aa17.79■□□□□ 0.44
ATP6V1C2-203ENST00000480289 PTPRTO14522 1441 aa17.79■□□□□ 0.44
ATP6V1C2-203ENST00000480289 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
ATP6V1C2-203ENST00000480289 PKD2Q13563 968 aa17.78■□□□□ 0.44
ATP6V1C2-203ENST00000480289 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
ATP6V1C2-203ENST00000480289 UNC13BO14795 1591 aa17.75■□□□□ 0.43
ATP6V1C2-203ENST00000480289 EFCAB6Q5THR3 1501 aa17.75■□□□□ 0.43
ATP6V1C2-203ENST00000480289 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
ATP6V1C2-203ENST00000480289 NAIPQ13075 1403 aa17.73■□□□□ 0.43
ATP6V1C2-203ENST00000480289 NUP155O75694 1391 aa17.73■□□□□ 0.43
ATP6V1C2-203ENST00000480289 NOS1P29475 1434 aa17.72■□□□□ 0.43
ATP6V1C2-203ENST00000480289 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
ATP6V1C2-203ENST00000480289 RPRD2Q5VT52 1461 aaKnown RBP17.72■□□□□ 0.43
ATP6V1C2-203ENST00000480289 ANKLE2Q86XL3 938 aa17.71■□□□□ 0.43
ATP6V1C2-203ENST00000480289 HFM1A2PYH4 1435 aa17.71■□□□□ 0.43
ATP6V1C2-203ENST00000480289 IDI1Q13907 227 aa17.7■□□□□ 0.42
ATP6V1C2-203ENST00000480289 TET3O43151 1660 aa17.69■□□□□ 0.42
ATP6V1C2-203ENST00000480289 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
ATP6V1C2-203ENST00000480289 SLC52A1Q9NWF4 448 aa17.68■□□□□ 0.42
ATP6V1C2-203ENST00000480289 SYNMO15061 1565 aa17.67■□□□□ 0.42
ATP6V1C2-203ENST00000480289 CERKQ8TCT0 537 aa17.66■□□□□ 0.42
ATP6V1C2-203ENST00000480289 GCC2Q8IWJ2 1684 aa17.65■□□□□ 0.42
ATP6V1C2-203ENST00000480289 UBR1Q8IWV7 1749 aa17.65■□□□□ 0.42
ATP6V1C2-203ENST00000480289 MED14O60244 1454 aa17.64■□□□□ 0.41
ATP6V1C2-203ENST00000480289 ILDR1Q86SU0 546 aaPredicted RBP17.64■□□□□ 0.41
ATP6V1C2-203ENST00000480289 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
ATP6V1C2-203ENST00000480289 NEURL4Q96JN8 1562 aa17.64■□□□□ 0.41
ATP6V1C2-203ENST00000480289 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
ATP6V1C2-203ENST00000480289 PIK3C2BO00750 1634 aa17.63■□□□□ 0.41
ATP6V1C2-203ENST00000480289 SLIT1O75093 1534 aa17.62■□□□□ 0.41
ATP6V1C2-203ENST00000480289 E9PCH4 1651 aa17.62■□□□□ 0.41
ATP6V1C2-203ENST00000480289 LTKP29376 864 aa17.62■□□□□ 0.41
ATP6V1C2-203ENST00000480289 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
ATP6V1C2-203ENST00000480289 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
ATP6V1C2-203ENST00000480289 POLR1AO95602 1720 aaPredicted RBP17.61■□□□□ 0.41
ATP6V1C2-203ENST00000480289 TXNDC2Q86VQ3 553 aa17.61■□□□□ 0.41
ATP6V1C2-203ENST00000480289 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
ATP6V1C2-203ENST00000480289 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
ATP6V1C2-203ENST00000480289 LTBP4Q8N2S1 1624 aa17.61■□□□□ 0.41
ATP6V1C2-203ENST00000480289 KDM5AP29375 1690 aaKnown RBP17.6■□□□□ 0.41
ATP6V1C2-203ENST00000480289 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
ATP6V1C2-203ENST00000480289 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
ATP6V1C2-203ENST00000480289 EID1Q9Y6B2 187 aa17.59■□□□□ 0.41
ATP6V1C2-203ENST00000480289 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
ATP6V1C2-203ENST00000480289 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
ATP6V1C2-203ENST00000480289 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
ATP6V1C2-203ENST00000480289 TMEM131LA2VDJ0 1609 aa17.53■□□□□ 0.4
ATP6V1C2-203ENST00000480289 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
ATP6V1C2-203ENST00000480289 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
ATP6V1C2-203ENST00000480289 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
ATP6V1C2-203ENST00000480289 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
ATP6V1C2-203ENST00000480289 IQSEC2Q5JU85 1478 aa17.5■□□□□ 0.39
ATP6V1C2-203ENST00000480289 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
ATP6V1C2-203ENST00000480289 RIMS2Q9UQ26 1411 aa17.49■□□□□ 0.39
ATP6V1C2-203ENST00000480289 SPHKAPQ2M3C7 1700 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms