RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 RICTORQ6R327 1708 aa14.52□□□□□ -0.09
CD46-214ENST00000480003 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
CD46-214ENST00000480003 NCOA1Q15788 1441 aa14.5□□□□□ -0.09
CD46-214ENST00000480003 MYT1LQ9UL68 1186 aa14.5□□□□□ -0.09
CD46-214ENST00000480003 ZMYM4Q5VZL5 1548 aa14.5□□□□□ -0.09
CD46-214ENST00000480003 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
CD46-214ENST00000480003 ROCK1Q13464 1354 aa14.49□□□□□ -0.09
CD46-214ENST00000480003 RRP7BPQ9NSQ0 103 aa14.49□□□□□ -0.09
CD46-214ENST00000480003 SHANK2Q9UPX8 1470 aa14.49□□□□□ -0.09
CD46-214ENST00000480003 YEATS2Q9ULM3 1422 aa14.49□□□□□ -0.09
CD46-214ENST00000480003 ANKRD30AQ9BXX3 1397 aa14.47□□□□□ -0.09
CD46-214ENST00000480003 MAST1Q9Y2H9 1570 aa14.47□□□□□ -0.09
CD46-214ENST00000480003 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
CD46-214ENST00000480003 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
CD46-214ENST00000480003 CHRDL2Q6WN34 429 aa14.46□□□□□ -0.09
CD46-214ENST00000480003 KIDINS220Q9ULH0 1771 aa14.46□□□□□ -0.09
CD46-214ENST00000480003 ATP10AO60312 1499 aa14.45□□□□□ -0.1
CD46-214ENST00000480003 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
CD46-214ENST00000480003 ZFYVE16Q7Z3T8 1539 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
CD46-214ENST00000480003 KIF15Q9NS87 1388 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
CD46-214ENST00000480003 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
CD46-214ENST00000480003 NAIPQ13075 1403 aa14.41□□□□□ -0.1
CD46-214ENST00000480003 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
CD46-214ENST00000480003 A2MP01023 1474 aa14.4□□□□□ -0.1
CD46-214ENST00000480003 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
CD46-214ENST00000480003 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
CD46-214ENST00000480003 HRCP23327 699 aa14.39□□□□□ -0.11
CD46-214ENST00000480003 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
CD46-214ENST00000480003 KIF3BO15066 747 aa14.38□□□□□ -0.11
CD46-214ENST00000480003 PCGF6Q9BYE7 350 aa14.38□□□□□ -0.11
CD46-214ENST00000480003 ANKRD50Q9ULJ7 1429 aa14.38□□□□□ -0.11
CD46-214ENST00000480003 ABCA6Q8N139 1617 aa14.37□□□□□ -0.11
CD46-214ENST00000480003 ARHGEF40Q8TER5 1519 aa14.37□□□□□ -0.11
CD46-214ENST00000480003 DUOX2Q9NRD8 1548 aa14.37□□□□□ -0.11
CD46-214ENST00000480003 REREQ9P2R6 1566 aa14.37□□□□□ -0.11
CD46-214ENST00000480003 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
CD46-214ENST00000480003 AGLP35573 1532 aa14.36□□□□□ -0.11
CD46-214ENST00000480003 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
CD46-214ENST00000480003 ARID4BQ4LE39 1312 aaPredicted RBP14.34□□□□□ -0.11
CD46-214ENST00000480003 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.11
CD46-214ENST00000480003 GGT6Q6P531 493 aa14.33□□□□□ -0.12
CD46-214ENST00000480003 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.12
CD46-214ENST00000480003 ACIN1Q9UKV3 1341 aaKnown RBP14.31□□□□□ -0.12
CD46-214ENST00000480003 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
CD46-214ENST00000480003 SIGLEC1Q9BZZ2 1709 aa14.3□□□□□ -0.12
CD46-214ENST00000480003 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
CD46-214ENST00000480003 MLECQ14165 292 aa14.3□□□□□ -0.12
CD46-214ENST00000480003 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
CD46-214ENST00000480003 ZNF692Q9BU19 519 aaPredicted RBP14.28□□□□□ -0.12
CD46-214ENST00000480003 BCORL1Q5H9F3 1711 aa14.27□□□□□ -0.13
CD46-214ENST00000480003 NUP155O75694 1391 aa14.26□□□□□ -0.13
CD46-214ENST00000480003 TRIM52Q96A61 297 aa14.26□□□□□ -0.13
CD46-214ENST00000480003 EIF2AK4Q9P2K8 1649 aaKnown RBP14.26□□□□□ -0.13
CD46-214ENST00000480003 WASHC2CQ9Y4E1 1318 aa14.25□□□□□ -0.13
CD46-214ENST00000480003 GCC2Q8IWJ2 1684 aa14.25□□□□□ -0.13
CD46-214ENST00000480003 MPHOSPH9Q99550 1183 aa14.23□□□□□ -0.13
CD46-214ENST00000480003 MROH1Q8NDA8 1641 aa14.23□□□□□ -0.13
CD46-214ENST00000480003 RNF17Q9BXT8 1623 aaKnown RBP14.23□□□□□ -0.13
CD46-214ENST00000480003 KANK1Q14678 1352 aa14.22□□□□□ -0.13
CD46-214ENST00000480003 VWDEQ8N2E2 1590 aa14.22□□□□□ -0.13
CD46-214ENST00000480003 KDM5DQ9BY66 1539 aa14.22□□□□□ -0.13
CD46-214ENST00000480003 ZMYM3Q14202 1370 aa14.21□□□□□ -0.14
CD46-214ENST00000480003 DEPDC5O75140 1603 aa14.2□□□□□ -0.14
CD46-214ENST00000480003 ESF1Q9H501 851 aaKnown RBP14.2□□□□□ -0.14
CD46-214ENST00000480003 UNC13BO14795 1591 aa14.19□□□□□ -0.14
CD46-214ENST00000480003 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
CD46-214ENST00000480003 LMTK2Q8IWU2 1503 aa14.19□□□□□ -0.14
CD46-214ENST00000480003 PZPP20742 1482 aa14.18□□□□□ -0.14
CD46-214ENST00000480003 CNTLNQ9NXG0 1405 aa14.18□□□□□ -0.14
CD46-214ENST00000480003 ADAMTSL3P82987 1691 aa14.18□□□□□ -0.14
CD46-214ENST00000480003 PKD2Q13563 968 aa14.18□□□□□ -0.14
CD46-214ENST00000480003 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
CD46-214ENST00000480003 ABCC3O15438 1527 aa14.17□□□□□ -0.14
CD46-214ENST00000480003 FAM135AQ9P2D6 1515 aa14.17□□□□□ -0.14
CD46-214ENST00000480003 CEBPAP49715 358 aaPredicted RBP14.17□□□□□ -0.14
CD46-214ENST00000480003 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
CD46-214ENST00000480003 FBXO31Q5XUX0 539 aaPredicted RBP14.15□□□□□ -0.14
CD46-214ENST00000480003 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
CD46-214ENST00000480003 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
CD46-214ENST00000480003 NPATQ14207 1427 aa14.13□□□□□ -0.15
CD46-214ENST00000480003 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
CD46-214ENST00000480003 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
CD46-214ENST00000480003 MADDQ8WXG6 1647 aa14.11□□□□□ -0.15
CD46-214ENST00000480003 PTPRMP28827 1452 aa14.11□□□□□ -0.15
CD46-214ENST00000480003 PTPRTO14522 1441 aa14.1□□□□□ -0.15
CD46-214ENST00000480003 NOS1P29475 1434 aa14.1□□□□□ -0.15
CD46-214ENST00000480003 RPRD2Q5VT52 1461 aaKnown RBP14.1□□□□□ -0.15
CD46-214ENST00000480003 ANKRD30BQ9BXX2 1392 aa14.09□□□□□ -0.15
CD46-214ENST00000480003 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
CD46-214ENST00000480003 PLA2R1Q13018 1463 aa14.09□□□□□ -0.15
CD46-214ENST00000480003 TET3O43151 1660 aa14.09□□□□□ -0.15
CD46-214ENST00000480003 CLTCQ00610 1675 aaKnown RBP14.09□□□□□ -0.15
CD46-214ENST00000480003 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
CD46-214ENST00000480003 CEP152O94986 1710 aa14.08□□□□□ -0.16
CD46-214ENST00000480003 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms