RNA–Protein interactions for RNA: ENST00000480001.5

RARB-207, Transcript of retinoic acid receptor beta, humanhuman

TSL 3

Gene RARB, Length 1,191 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-207ENST00000480001 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
RARB-207ENST00000480001 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
RARB-207ENST00000480001 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
RARB-207ENST00000480001 EEA1Q15075 1411 aa12.75□□□□□ -0.37
RARB-207ENST00000480001 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
RARB-207ENST00000480001 NLRP1Q9C000 1473 aa12.73□□□□□ -0.37
RARB-207ENST00000480001 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
RARB-207ENST00000480001 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.37
RARB-207ENST00000480001 ZNF777Q9ULD5 760 aaPredicted RBP12.71□□□□□ -0.37
RARB-207ENST00000480001 PZPP20742 1482 aa12.71□□□□□ -0.38
RARB-207ENST00000480001 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.38
RARB-207ENST00000480001 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
RARB-207ENST00000480001 UGGT1Q9NYU2 1555 aa12.7□□□□□ -0.38
RARB-207ENST00000480001 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
RARB-207ENST00000480001 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
RARB-207ENST00000480001 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
RARB-207ENST00000480001 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
RARB-207ENST00000480001 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
RARB-207ENST00000480001 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
RARB-207ENST00000480001 INO80Q9ULG1 1556 aaPredicted RBP12.67□□□□□ -0.38
RARB-207ENST00000480001 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
RARB-207ENST00000480001 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
RARB-207ENST00000480001 SRCAPQ6ZRS2 3230 aa12.66□□□□□ -0.38
RARB-207ENST00000480001 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
RARB-207ENST00000480001 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
RARB-207ENST00000480001 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
RARB-207ENST00000480001 JCADQ9P266 1359 aa12.65□□□□□ -0.38
RARB-207ENST00000480001 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
RARB-207ENST00000480001 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
RARB-207ENST00000480001 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
RARB-207ENST00000480001 RTEL1-TNFRSF6BF6WH68 1400 aa12.62□□□□□ -0.39
RARB-207ENST00000480001 GPATCH8Q9UKJ3 1502 aaKnown RBP12.62□□□□□ -0.39
RARB-207ENST00000480001 ARHGAP35Q9NRY4 1499 aa12.62□□□□□ -0.39
RARB-207ENST00000480001 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
RARB-207ENST00000480001 KIF3BO15066 747 aa12.61□□□□□ -0.39
RARB-207ENST00000480001 RXRBP28702 533 aa12.61□□□□□ -0.39
RARB-207ENST00000480001 TRIM52Q96A61 297 aa12.61□□□□□ -0.39
RARB-207ENST00000480001 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
RARB-207ENST00000480001 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
RARB-207ENST00000480001 SCAF11Q99590 1463 aaKnown RBP12.59□□□□□ -0.39
RARB-207ENST00000480001 ZC3H13Q5T200 1668 aaKnown RBP12.58□□□□□ -0.4
RARB-207ENST00000480001 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
RARB-207ENST00000480001 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
RARB-207ENST00000480001 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
RARB-207ENST00000480001 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
RARB-207ENST00000480001 EID1Q9Y6B2 187 aa12.57□□□□□ -0.4
RARB-207ENST00000480001 TMEM94Q12767 1356 aa12.56□□□□□ -0.4
RARB-207ENST00000480001 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
RARB-207ENST00000480001 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
RARB-207ENST00000480001 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
RARB-207ENST00000480001 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
RARB-207ENST00000480001 FGD6Q6ZV73 1430 aa12.55□□□□□ -0.4
RARB-207ENST00000480001 KCNA6P17658 529 aa12.54□□□□□ -0.4
RARB-207ENST00000480001 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
RARB-207ENST00000480001 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
RARB-207ENST00000480001 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
RARB-207ENST00000480001 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
RARB-207ENST00000480001 LTKP29376 864 aa12.52□□□□□ -0.41
RARB-207ENST00000480001 MSH6P52701 1360 aa12.52□□□□□ -0.41
RARB-207ENST00000480001 ARHGAP23Q9P227 1491 aa12.52□□□□□ -0.41
RARB-207ENST00000480001 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
RARB-207ENST00000480001 SLIT1O75093 1534 aa12.52□□□□□ -0.41
RARB-207ENST00000480001 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
RARB-207ENST00000480001 ERVK-7P63135 1459 aa12.49□□□□□ -0.41
RARB-207ENST00000480001 LRP6O75581 1613 aa12.48□□□□□ -0.41
RARB-207ENST00000480001 ABCC3O15438 1527 aa12.48□□□□□ -0.41
RARB-207ENST00000480001 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
RARB-207ENST00000480001 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
RARB-207ENST00000480001 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
RARB-207ENST00000480001 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
RARB-207ENST00000480001 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
RARB-207ENST00000480001 NCOA2Q15596 1464 aa12.46□□□□□ -0.41
RARB-207ENST00000480001 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
RARB-207ENST00000480001 COL16A1Q07092 1604 aaPredicted RBP12.46□□□□□ -0.41
RARB-207ENST00000480001 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
RARB-207ENST00000480001 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
RARB-207ENST00000480001 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
RARB-207ENST00000480001 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
RARB-207ENST00000480001 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
RARB-207ENST00000480001 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
RARB-207ENST00000480001 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
RARB-207ENST00000480001 CCDC141Q6ZP82 1450 aa12.44□□□□□ -0.42
RARB-207ENST00000480001 TIAM1Q13009 1591 aa12.43□□□□□ -0.42
RARB-207ENST00000480001 TSPY4P0CV99 314 aa12.43□□□□□ -0.42
RARB-207ENST00000480001 TSPY10P0CW01 314 aa12.43□□□□□ -0.42
RARB-207ENST00000480001 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
RARB-207ENST00000480001 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
RARB-207ENST00000480001 AFF2P51816 1311 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 CAMSAP2Q08AD1 1489 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 NCOA3Q9Y6Q9 1424 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 SHPRHQ149N8 1683 aa12.42□□□□□ -0.42
RARB-207ENST00000480001 RGS12O14924 1447 aa12.41□□□□□ -0.42
RARB-207ENST00000480001 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
RARB-207ENST00000480001 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
RARB-207ENST00000480001 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
RARB-207ENST00000480001 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
RARB-207ENST00000480001 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
RARB-207ENST00000480001 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms