RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
CCDC58-205ENST00000479899 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
CCDC58-205ENST00000479899 MYO3AQ8NEV4 1616 aa17.52■□□□□ 0.4
CCDC58-205ENST00000479899 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
CCDC58-205ENST00000479899 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
CCDC58-205ENST00000479899 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
CCDC58-205ENST00000479899 INO80Q9ULG1 1556 aaPredicted RBP17.52■□□□□ 0.39
CCDC58-205ENST00000479899 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.39
CCDC58-205ENST00000479899 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
CCDC58-205ENST00000479899 HNRNPMP52272 730 aaKnown RBP eCLIP17.51■□□□□ 0.393e-7■■■■■ 27.8
CCDC58-205ENST00000479899 ILDR2Q71H61 639 aa17.51■□□□□ 0.39
CCDC58-205ENST00000479899 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
CCDC58-205ENST00000479899 NPATQ14207 1427 aa17.48■□□□□ 0.39
CCDC58-205ENST00000479899 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
CCDC58-205ENST00000479899 ZNF142P52746 1687 aaPredicted RBP17.48■□□□□ 0.39
CCDC58-205ENST00000479899 A2MP01023 1474 aa17.47■□□□□ 0.39
CCDC58-205ENST00000479899 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
CCDC58-205ENST00000479899 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.38
CCDC58-205ENST00000479899 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
CCDC58-205ENST00000479899 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
CCDC58-205ENST00000479899 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
CCDC58-205ENST00000479899 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
CCDC58-205ENST00000479899 GGT6Q6P531 493 aa17.44■□□□□ 0.38
CCDC58-205ENST00000479899 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
CCDC58-205ENST00000479899 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
CCDC58-205ENST00000479899 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
CCDC58-205ENST00000479899 ZNF692Q9BU19 519 aaPredicted RBP17.43■□□□□ 0.38
CCDC58-205ENST00000479899 ZNF335Q9H4Z2 1342 aaPredicted RBP17.43■□□□□ 0.38
CCDC58-205ENST00000479899 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
CCDC58-205ENST00000479899 KIAA1107Q9UPP5 1409 aa17.42■□□□□ 0.38
CCDC58-205ENST00000479899 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
CCDC58-205ENST00000479899 EHBP1L1Q8N3D4 1523 aa17.39■□□□□ 0.37
CCDC58-205ENST00000479899 SOCS7O14512 581 aa17.39■□□□□ 0.37
CCDC58-205ENST00000479899 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
CCDC58-205ENST00000479899 FKBP8Q14318 412 aa17.38■□□□□ 0.37
CCDC58-205ENST00000479899 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
CCDC58-205ENST00000479899 UBAP1LF5GYI3 381 aa17.37■□□□□ 0.37
CCDC58-205ENST00000479899 SSUH2Q9Y2M2 353 aa17.36■□□□□ 0.37
CCDC58-205ENST00000479899 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
CCDC58-205ENST00000479899 POLR1AO95602 1720 aaPredicted RBP17.34■□□□□ 0.37
CCDC58-205ENST00000479899 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
CCDC58-205ENST00000479899 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
CCDC58-205ENST00000479899 PKD2Q13563 968 aa17.33■□□□□ 0.36
CCDC58-205ENST00000479899 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
CCDC58-205ENST00000479899 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
CCDC58-205ENST00000479899 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
CCDC58-205ENST00000479899 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
CCDC58-205ENST00000479899 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
CCDC58-205ENST00000479899 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
CCDC58-205ENST00000479899 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
CCDC58-205ENST00000479899 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
CCDC58-205ENST00000479899 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
CCDC58-205ENST00000479899 TNRQ92752 1358 aa17.28■□□□□ 0.36
CCDC58-205ENST00000479899 KIF3BO15066 747 aa17.27■□□□□ 0.36
CCDC58-205ENST00000479899 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
CCDC58-205ENST00000479899 PZPP20742 1482 aa17.25■□□□□ 0.35
CCDC58-205ENST00000479899 NCOA2Q15596 1464 aa17.25■□□□□ 0.35
CCDC58-205ENST00000479899 PIP4K2BP78356 416 aa17.25■□□□□ 0.35
CCDC58-205ENST00000479899 CPS1P31327 1500 aa17.22■□□□□ 0.35
CCDC58-205ENST00000479899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC58-205ENST00000479899 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
CCDC58-205ENST00000479899 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
CCDC58-205ENST00000479899 MED1Q15648 1581 aaPredicted RBP17.2■□□□□ 0.34
CCDC58-205ENST00000479899 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
CCDC58-205ENST00000479899 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
CCDC58-205ENST00000479899 HSPA1LP34931 641 aa17.19■□□□□ 0.34
CCDC58-205ENST00000479899 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
CCDC58-205ENST00000479899 VWDEQ8N2E2 1590 aa17.19■□□□□ 0.34
CCDC58-205ENST00000479899 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
CCDC58-205ENST00000479899 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
CCDC58-205ENST00000479899 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
CCDC58-205ENST00000479899 TOM1O60784 492 aa17.16■□□□□ 0.34
CCDC58-205ENST00000479899 ANKLE2Q86XL3 938 aa17.16■□□□□ 0.34
CCDC58-205ENST00000479899 PROM2Q8N271 834 aa17.16■□□□□ 0.34
CCDC58-205ENST00000479899 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
CCDC58-205ENST00000479899 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
CCDC58-205ENST00000479899 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
CCDC58-205ENST00000479899 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
CCDC58-205ENST00000479899 CEP152O94986 1710 aa17.15■□□□□ 0.34
CCDC58-205ENST00000479899 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
CCDC58-205ENST00000479899 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
CCDC58-205ENST00000479899 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
CCDC58-205ENST00000479899 ABCC3O15438 1527 aa17.13■□□□□ 0.33
CCDC58-205ENST00000479899 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
CCDC58-205ENST00000479899 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
CCDC58-205ENST00000479899 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
CCDC58-205ENST00000479899 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
CCDC58-205ENST00000479899 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
CCDC58-205ENST00000479899 MED14O60244 1454 aa17.11■□□□□ 0.33
CCDC58-205ENST00000479899 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
CCDC58-205ENST00000479899 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
CCDC58-205ENST00000479899 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
CCDC58-205ENST00000479899 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
CCDC58-205ENST00000479899 SYNMO15061 1565 aa17.09■□□□□ 0.33
CCDC58-205ENST00000479899 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
CCDC58-205ENST00000479899 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
CCDC58-205ENST00000479899 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
CCDC58-205ENST00000479899 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
CCDC58-205ENST00000479899 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
CCDC58-205ENST00000479899 DUOX2Q9NRD8 1548 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms