RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
LYSMD4-206ENST00000479791 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
LYSMD4-206ENST00000479791 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
LYSMD4-206ENST00000479791 PLIN1O60240 522 aa17.06■□□□□ 0.32
LYSMD4-206ENST00000479791 ANKRD30AQ9BXX3 1397 aa17.06■□□□□ 0.32
LYSMD4-206ENST00000479791 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
LYSMD4-206ENST00000479791 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
LYSMD4-206ENST00000479791 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
LYSMD4-206ENST00000479791 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
LYSMD4-206ENST00000479791 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
LYSMD4-206ENST00000479791 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
LYSMD4-206ENST00000479791 CFDP1Q9UEE9 299 aaPredicted RBP17.03■□□□□ 0.32
LYSMD4-206ENST00000479791 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
LYSMD4-206ENST00000479791 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
LYSMD4-206ENST00000479791 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
LYSMD4-206ENST00000479791 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
LYSMD4-206ENST00000479791 TROQ12816 1431 aaPredicted RBP17.01■□□□□ 0.31
LYSMD4-206ENST00000479791 SKAP1Q86WV1 359 aa17.01■□□□□ 0.31
LYSMD4-206ENST00000479791 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
LYSMD4-206ENST00000479791 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
LYSMD4-206ENST00000479791 GPATCH8Q9UKJ3 1502 aaKnown RBP17■□□□□ 0.31
LYSMD4-206ENST00000479791 CEP170Q5SW79 1584 aa17■□□□□ 0.31
LYSMD4-206ENST00000479791 SLC4A3P48751 1232 aa17■□□□□ 0.31
LYSMD4-206ENST00000479791 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
LYSMD4-206ENST00000479791 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
LYSMD4-206ENST00000479791 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
LYSMD4-206ENST00000479791 NUP155O75694 1391 aa16.99■□□□□ 0.31
LYSMD4-206ENST00000479791 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
LYSMD4-206ENST00000479791 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
LYSMD4-206ENST00000479791 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
LYSMD4-206ENST00000479791 DISP1Q96F81 1524 aa16.97■□□□□ 0.31
LYSMD4-206ENST00000479791 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
LYSMD4-206ENST00000479791 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
LYSMD4-206ENST00000479791 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
LYSMD4-206ENST00000479791 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
LYSMD4-206ENST00000479791 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
LYSMD4-206ENST00000479791 SHANK2Q9UPX8 1470 aa16.95■□□□□ 0.3
LYSMD4-206ENST00000479791 PTPRGP23470 1445 aa16.94■□□□□ 0.3
LYSMD4-206ENST00000479791 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
LYSMD4-206ENST00000479791 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
LYSMD4-206ENST00000479791 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
LYSMD4-206ENST00000479791 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
LYSMD4-206ENST00000479791 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
LYSMD4-206ENST00000479791 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
LYSMD4-206ENST00000479791 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-206ENST00000479791 ZNF777Q9ULD5 760 aaPredicted RBP16.91■□□□□ 0.3
LYSMD4-206ENST00000479791 LAMC1P11047 1609 aa16.9■□□□□ 0.3
LYSMD4-206ENST00000479791 CC2D1BQ5T0F9 858 aaKnown RBP16.9■□□□□ 0.3
LYSMD4-206ENST00000479791 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
LYSMD4-206ENST00000479791 C9orf84Q5VXU9 1444 aa16.89■□□□□ 0.29
LYSMD4-206ENST00000479791 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
LYSMD4-206ENST00000479791 PANK3Q9H999 370 aa16.87■□□□□ 0.29
LYSMD4-206ENST00000479791 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
LYSMD4-206ENST00000479791 TESK2Q96S53 571 aa16.86■□□□□ 0.29
LYSMD4-206ENST00000479791 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
LYSMD4-206ENST00000479791 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
LYSMD4-206ENST00000479791 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
LYSMD4-206ENST00000479791 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
LYSMD4-206ENST00000479791 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
LYSMD4-206ENST00000479791 PLEKHH1Q9ULM0 1364 aa16.84■□□□□ 0.29
LYSMD4-206ENST00000479791 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
LYSMD4-206ENST00000479791 ERBINQ96RT1 1412 aa16.83■□□□□ 0.29
LYSMD4-206ENST00000479791 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.29
LYSMD4-206ENST00000479791 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
LYSMD4-206ENST00000479791 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
LYSMD4-206ENST00000479791 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
LYSMD4-206ENST00000479791 RGS3P49796 1198 aa16.83■□□□□ 0.28
LYSMD4-206ENST00000479791 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
LYSMD4-206ENST00000479791 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
LYSMD4-206ENST00000479791 TMF1P82094 1093 aa16.82■□□□□ 0.28
LYSMD4-206ENST00000479791 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
LYSMD4-206ENST00000479791 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
LYSMD4-206ENST00000479791 USP19O94966 1318 aa16.8■□□□□ 0.28
LYSMD4-206ENST00000479791 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
LYSMD4-206ENST00000479791 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
LYSMD4-206ENST00000479791 TRMT2AQ8IZ69 625 aaKnown RBP16.8■□□□□ 0.28
LYSMD4-206ENST00000479791 PLB1Q6P1J6 1458 aa16.79■□□□□ 0.28
LYSMD4-206ENST00000479791 BECN1Q14457 450 aa16.79■□□□□ 0.28
LYSMD4-206ENST00000479791 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
LYSMD4-206ENST00000479791 ABCC10Q5T3U5 1492 aa16.79■□□□□ 0.28
LYSMD4-206ENST00000479791 A2MP01023 1474 aa16.78■□□□□ 0.28
LYSMD4-206ENST00000479791 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
LYSMD4-206ENST00000479791 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
LYSMD4-206ENST00000479791 POGKQ9P215 609 aa16.77■□□□□ 0.28
LYSMD4-206ENST00000479791 NUP160Q12769 1436 aa16.77■□□□□ 0.28
LYSMD4-206ENST00000479791 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
LYSMD4-206ENST00000479791 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
LYSMD4-206ENST00000479791 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
LYSMD4-206ENST00000479791 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
LYSMD4-206ENST00000479791 CCDC141Q6ZP82 1450 aa16.74■□□□□ 0.27
LYSMD4-206ENST00000479791 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 PIK3C2GO75747 1445 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
LYSMD4-206ENST00000479791 RRAGDQ9NQL2 400 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-206ENST00000479791 CGNL1Q0VF96 1302 aa16.72■□□□□ 0.27
LYSMD4-206ENST00000479791 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms