RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 DEPDC5O75140 1603 aa20.96■□□□□ 0.95
RPP40-205ENST00000479782 ATP10AO60312 1499 aa20.95■□□□□ 0.94
RPP40-205ENST00000479782 CCER1Q8TC90 406 aaPredicted RBP20.94■□□□□ 0.94
RPP40-205ENST00000479782 TRIM52Q96A61 297 aa20.94■□□□□ 0.94
RPP40-205ENST00000479782 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
RPP40-205ENST00000479782 IQGAP3Q86VI3 1631 aa20.91■□□□□ 0.94
RPP40-205ENST00000479782 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
RPP40-205ENST00000479782 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
RPP40-205ENST00000479782 PZPP20742 1482 aa20.89■□□□□ 0.94
RPP40-205ENST00000479782 NUP155O75694 1391 aa20.89■□□□□ 0.93
RPP40-205ENST00000479782 AGLP35573 1532 aa20.88■□□□□ 0.93
RPP40-205ENST00000479782 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
RPP40-205ENST00000479782 MROH1Q8NDA8 1641 aa20.87■□□□□ 0.93
RPP40-205ENST00000479782 KIF3BO15066 747 aa20.87■□□□□ 0.93
RPP40-205ENST00000479782 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
RPP40-205ENST00000479782 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
RPP40-205ENST00000479782 KANK1Q14678 1352 aa20.85■□□□□ 0.93
RPP40-205ENST00000479782 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
RPP40-205ENST00000479782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
RPP40-205ENST00000479782 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
RPP40-205ENST00000479782 TET3O43151 1660 aa20.8■□□□□ 0.92
RPP40-205ENST00000479782 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
RPP40-205ENST00000479782 LMTK2Q8IWU2 1503 aa20.79■□□□□ 0.92
RPP40-205ENST00000479782 CEP152O94986 1710 aa20.75■□□□□ 0.91
RPP40-205ENST00000479782 PKD2Q13563 968 aa20.75■□□□□ 0.91
RPP40-205ENST00000479782 GGT6Q6P531 493 aa20.75■□□□□ 0.91
RPP40-205ENST00000479782 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
RPP40-205ENST00000479782 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
RPP40-205ENST00000479782 ABCC3O15438 1527 aa20.73■□□□□ 0.91
RPP40-205ENST00000479782 E9PCH4 1651 aa20.73■□□□□ 0.91
RPP40-205ENST00000479782 EFCAB6Q5THR3 1501 aa20.73■□□□□ 0.91
RPP40-205ENST00000479782 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
RPP40-205ENST00000479782 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
RPP40-205ENST00000479782 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
RPP40-205ENST00000479782 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
RPP40-205ENST00000479782 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
RPP40-205ENST00000479782 FOXD1Q16676 465 aa20.68■□□□□ 0.9
RPP40-205ENST00000479782 ARID4BQ4LE39 1312 aaPredicted RBP20.67■□□□□ 0.9
RPP40-205ENST00000479782 SPHKAPQ2M3C7 1700 aa20.65■□□□□ 0.9
RPP40-205ENST00000479782 ARHGAP31Q2M1Z3 1444 aa20.65■□□□□ 0.9
RPP40-205ENST00000479782 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.9
RPP40-205ENST00000479782 PTPRTO14522 1441 aa20.62■□□□□ 0.89
RPP40-205ENST00000479782 TRPM2O94759 1503 aa20.62■□□□□ 0.89
RPP40-205ENST00000479782 NPATQ14207 1427 aa20.61■□□□□ 0.89
RPP40-205ENST00000479782 MLECQ14165 292 aa20.61■□□□□ 0.89
RPP40-205ENST00000479782 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
RPP40-205ENST00000479782 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
RPP40-205ENST00000479782 MROH2AA6NES4 1674 aa20.61■□□□□ 0.89
RPP40-205ENST00000479782 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
RPP40-205ENST00000479782 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
RPP40-205ENST00000479782 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
RPP40-205ENST00000479782 CCDC144AA2RUR9 1427 aa20.58■□□□□ 0.88
RPP40-205ENST00000479782 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
RPP40-205ENST00000479782 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
RPP40-205ENST00000479782 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
RPP40-205ENST00000479782 TONSLQ96HA7 1378 aa20.54■□□□□ 0.88
RPP40-205ENST00000479782 NOS1P29475 1434 aa20.53■□□□□ 0.88
RPP40-205ENST00000479782 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
RPP40-205ENST00000479782 ADAMTSL3P82987 1691 aa20.51■□□□□ 0.87
RPP40-205ENST00000479782 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
RPP40-205ENST00000479782 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
RPP40-205ENST00000479782 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
RPP40-205ENST00000479782 SYNMO15061 1565 aa20.5■□□□□ 0.87
RPP40-205ENST00000479782 NEURL4Q96JN8 1562 aa20.5■□□□□ 0.87
RPP40-205ENST00000479782 PIK3C2BO00750 1634 aa20.49■□□□□ 0.87
RPP40-205ENST00000479782 MADDQ8WXG6 1647 aa20.49■□□□□ 0.87
RPP40-205ENST00000479782 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
RPP40-205ENST00000479782 KIF1BO60333 1816 aa20.47■□□□□ 0.87
RPP40-205ENST00000479782 C3P01024 1663 aa20.46■□□□□ 0.87
RPP40-205ENST00000479782 UGGT1Q9NYU2 1555 aa20.46■□□□□ 0.87
RPP40-205ENST00000479782 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
RPP40-205ENST00000479782 SLC52A1Q9NWF4 448 aa20.43■□□□□ 0.86
RPP40-205ENST00000479782 SPATA31E1Q6ZUB1 1445 aa20.43■□□□□ 0.86
RPP40-205ENST00000479782 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
RPP40-205ENST00000479782 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
RPP40-205ENST00000479782 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
RPP40-205ENST00000479782 PPP1R15AO75807 674 aaPredicted RBP20.39■□□□□ 0.85
RPP40-205ENST00000479782 TNRQ92752 1358 aa20.37■□□□□ 0.85
RPP40-205ENST00000479782 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
RPP40-205ENST00000479782 TMEM131LA2VDJ0 1609 aa20.35■□□□□ 0.85
RPP40-205ENST00000479782 IDI1Q13907 227 aa20.35■□□□□ 0.85
RPP40-205ENST00000479782 STAC3Q96MF2 364 aa20.34■□□□□ 0.85
RPP40-205ENST00000479782 NLRP1Q9C000 1473 aa20.34■□□□□ 0.85
RPP40-205ENST00000479782 IFT172Q9UG01 1749 aa20.33■□□□□ 0.85
RPP40-205ENST00000479782 RGL3Q3MIN7 710 aa20.33■□□□□ 0.85
RPP40-205ENST00000479782 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
RPP40-205ENST00000479782 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
RPP40-205ENST00000479782 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
RPP40-205ENST00000479782 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
RPP40-205ENST00000479782 PPLO60437 1756 aa20.3■□□□□ 0.84
RPP40-205ENST00000479782 PTPRMP28827 1452 aa20.3■□□□□ 0.84
RPP40-205ENST00000479782 MYO5BQ9ULV0 1848 aa20.3■□□□□ 0.84
RPP40-205ENST00000479782 MYO3AQ8NEV4 1616 aa20.29■□□□□ 0.84
RPP40-205ENST00000479782 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
RPP40-205ENST00000479782 MYOM2P54296 1465 aa20.29■□□□□ 0.84
RPP40-205ENST00000479782 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.84
RPP40-205ENST00000479782 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
RPP40-205ENST00000479782 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
RPP40-205ENST00000479782 A2ML1A8K2U0 1454 aa20.26■□□□□ 0.83
RPP40-205ENST00000479782 STAG3Q9UJ98 1225 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms