RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 DDRGK1Q96HY6 314 aa27.3■■□□□ 1.96
COL13A1-208ENST00000479733 DAXXQ9UER7 740 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-208ENST00000479733 NUP153P49790 1475 aaKnown RBP27.29■■□□□ 1.96
COL13A1-208ENST00000479733 NFKBIBQ15653 356 aa27.28■■□□□ 1.96
COL13A1-208ENST00000479733 ANKRD30AQ9BXX3 1397 aa27.28■■□□□ 1.96
COL13A1-208ENST00000479733 ANKRD50Q9ULJ7 1429 aa27.28■■□□□ 1.96
COL13A1-208ENST00000479733 GSE1Q14687 1217 aa27.27■■□□□ 1.96
COL13A1-208ENST00000479733 RGL3Q3MIN7 710 aa27.27■■□□□ 1.96
COL13A1-208ENST00000479733 UHRF1BP1Q6BDS2 1440 aa27.26■■□□□ 1.95
COL13A1-208ENST00000479733 NBPF1Q3BBV0 1214 aa27.22■■□□□ 1.95
COL13A1-208ENST00000479733 PARD3Q8TEW0 1356 aa27.21■■□□□ 1.95
COL13A1-208ENST00000479733 FRAT1Q92837 279 aaPredicted RBP27.21■■□□□ 1.95
COL13A1-208ENST00000479733 PER1O15534 1290 aaPredicted RBP27.2■■□□□ 1.94
COL13A1-208ENST00000479733 KIAA0586Q9BVV6 1533 aa27.19■■□□□ 1.94
COL13A1-208ENST00000479733 GPATCH8Q9UKJ3 1502 aaKnown RBP27.18■■□□□ 1.94
COL13A1-208ENST00000479733 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
COL13A1-208ENST00000479733 TROQ12816 1431 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-208ENST00000479733 PANK3Q9H999 370 aa27.16■■□□□ 1.94
COL13A1-208ENST00000479733 RGS3P49796 1198 aa27.15■■□□□ 1.94
COL13A1-208ENST00000479733 DISP1Q96F81 1524 aa27.14■■□□□ 1.94
COL13A1-208ENST00000479733 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-208ENST00000479733 TSPY4P0CV99 314 aa27.13■■□□□ 1.93
COL13A1-208ENST00000479733 TSPY10P0CW01 314 aa27.13■■□□□ 1.93
COL13A1-208ENST00000479733 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
COL13A1-208ENST00000479733 ADAMTS12P58397 1594 aa27.12■■□□□ 1.93
COL13A1-208ENST00000479733 ADAMTS8Q9UP79 889 aa27.12■■□□□ 1.93
COL13A1-208ENST00000479733 ADGRL2O95490 1459 aa27.1■■□□□ 1.93
COL13A1-208ENST00000479733 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
COL13A1-208ENST00000479733 EIF5BO60841 1220 aaKnown RBP27.1■■□□□ 1.93
COL13A1-208ENST00000479733 FRAT2O75474 233 aaPredicted RBP27.09■■□□□ 1.93
COL13A1-208ENST00000479733 HNRNPMP52272 730 aaKnown RBP eCLIP27.09■■□□□ 1.93
COL13A1-208ENST00000479733 PLB1Q6P1J6 1458 aa27.08■■□□□ 1.93
COL13A1-208ENST00000479733 KDM2BQ8NHM5 1336 aa27.08■■□□□ 1.93
COL13A1-208ENST00000479733 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
COL13A1-208ENST00000479733 FAM161AQ3B820 660 aa27.07■■□□□ 1.92
COL13A1-208ENST00000479733 ADGBQ8N7X0 1667 aa27.07■■□□□ 1.92
COL13A1-208ENST00000479733 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
COL13A1-208ENST00000479733 CENPQQ7L2Z9 268 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-208ENST00000479733 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
COL13A1-208ENST00000479733 C8orf34Q49A92 452 aa27.06■■□□□ 1.92
COL13A1-208ENST00000479733 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
COL13A1-208ENST00000479733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.92
COL13A1-208ENST00000479733 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
COL13A1-208ENST00000479733 E9PCH4 1651 aa27.03■■□□□ 1.92
COL13A1-208ENST00000479733 BLMP54132 1417 aaPredicted RBP27.01■■□□□ 1.91
COL13A1-208ENST00000479733 PLEKHD1A6NEE1 506 aa27■■□□□ 1.91
COL13A1-208ENST00000479733 FBLN2P98095 1184 aa27■■□□□ 1.91
COL13A1-208ENST00000479733 TESK2Q96S53 571 aa27■■□□□ 1.91
COL13A1-208ENST00000479733 WDR43Q15061 677 aaKnown RBP eCLIP26.99■■□□□ 1.91
COL13A1-208ENST00000479733 DUSP27Q5VZP5 1158 aa26.99■■□□□ 1.91
COL13A1-208ENST00000479733 PRAG1Q86YV5 1406 aa26.97■■□□□ 1.91
COL13A1-208ENST00000479733 PLEKHH1Q9ULM0 1364 aa26.97■■□□□ 1.91
COL13A1-208ENST00000479733 ITSN2Q9NZM3 1697 aa26.97■■□□□ 1.91
COL13A1-208ENST00000479733 CCDC144AA2RUR9 1427 aa26.95■■□□□ 1.9
COL13A1-208ENST00000479733 TMF1P82094 1093 aa26.95■■□□□ 1.9
COL13A1-208ENST00000479733 CROCC2H7BZ55 1655 aa26.94■■□□□ 1.9
COL13A1-208ENST00000479733 GOLGA2Q08379 1002 aa26.93■■□□□ 1.9
COL13A1-208ENST00000479733 CCDC146Q8IYE0 955 aa26.93■■□□□ 1.9
COL13A1-208ENST00000479733 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
COL13A1-208ENST00000479733 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.92■■□□□ 1.9
COL13A1-208ENST00000479733 ZMYM4Q5VZL5 1548 aa26.91■■□□□ 1.9
COL13A1-208ENST00000479733 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
COL13A1-208ENST00000479733 KNSTRNQ9Y448 316 aa26.89■■□□□ 1.9
COL13A1-208ENST00000479733 ERBINQ96RT1 1412 aa26.89■■□□□ 1.9
COL13A1-208ENST00000479733 PPP2R1AP30153 589 aa26.89■■□□□ 1.9
COL13A1-208ENST00000479733 KDM5DQ9BY66 1539 aa26.89■■□□□ 1.89
COL13A1-208ENST00000479733 COL17A1Q9UMD9 1497 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-208ENST00000479733 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-208ENST00000479733 BCAR3O75815 825 aa26.87■■□□□ 1.89
COL13A1-208ENST00000479733 SPINK5Q9NQ38 1064 aaPredicted RBP26.85■■□□□ 1.89
COL13A1-208ENST00000479733 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
COL13A1-208ENST00000479733 TRPM1Q7Z4N2 1603 aa26.83■■□□□ 1.89
COL13A1-208ENST00000479733 PTPRGP23470 1445 aa26.83■■□□□ 1.89
COL13A1-208ENST00000479733 SLKQ9H2G2 1235 aaPredicted RBP26.83■■□□□ 1.88
COL13A1-208ENST00000479733 GRIN2AQ12879 1464 aa26.82■■□□□ 1.88
COL13A1-208ENST00000479733 IGHDP01880 384 aa26.82■■□□□ 1.88
COL13A1-208ENST00000479733 SLFN5Q08AF3 891 aa26.82■■□□□ 1.88
COL13A1-208ENST00000479733 POGKQ9P215 609 aa26.82■■□□□ 1.88
COL13A1-208ENST00000479733 FAM135AQ9P2D6 1515 aa26.82■■□□□ 1.88
COL13A1-208ENST00000479733 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
COL13A1-208ENST00000479733 INSRP06213 1382 aa26.81■■□□□ 1.88
COL13A1-208ENST00000479733 A2MP01023 1474 aa26.81■■□□□ 1.88
COL13A1-208ENST00000479733 SEC24BO95487 1268 aa26.8■■□□□ 1.88
COL13A1-208ENST00000479733 ARXQ96QS3 562 aa26.8■■□□□ 1.88
COL13A1-208ENST00000479733 CDC42BPAQ5VT25 1732 aa26.8■■□□□ 1.88
COL13A1-208ENST00000479733 APAF1O14727 1248 aa26.79■■□□□ 1.88
COL13A1-208ENST00000479733 GPRASP1Q5JY77 1395 aa26.79■■□□□ 1.88
COL13A1-208ENST00000479733 ZNF521Q96K83 1311 aa26.79■■□□□ 1.88
COL13A1-208ENST00000479733 SHANK2Q9UPX8 1470 aa26.79■■□□□ 1.88
COL13A1-208ENST00000479733 PLA2R1Q13018 1463 aa26.76■■□□□ 1.87
COL13A1-208ENST00000479733 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
COL13A1-208ENST00000479733 ADCY10Q96PN6 1610 aa26.75■■□□□ 1.87
COL13A1-208ENST00000479733 AMER1Q5JTC6 1135 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-208ENST00000479733 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
COL13A1-208ENST00000479733 USP19O94966 1318 aa26.73■■□□□ 1.87
COL13A1-208ENST00000479733 ABCC10Q5T3U5 1492 aa26.73■■□□□ 1.87
COL13A1-208ENST00000479733 CANXP27824 592 aaKnown RBP26.72■■□□□ 1.87
COL13A1-208ENST00000479733 DMRT2Q9Y5R5 561 aa26.72■■□□□ 1.87
COL13A1-208ENST00000479733 FAM43AQ8N2R8 423 aa26.71■■□□□ 1.87
COL13A1-208ENST00000479733 COG6Q9Y2V7 657 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms