RNA–Protein interactions for RNA: ENST00000479687.6

VAMP7-205, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-205ENST00000479687 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
VAMP7-205ENST00000479687 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
VAMP7-205ENST00000479687 POLA2Q14181 598 aa11.51□□□□□ -0.57
VAMP7-205ENST00000479687 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
VAMP7-205ENST00000479687 CEP170BQ9Y4F5 1589 aaPredicted RBP11.5□□□□□ -0.57
VAMP7-205ENST00000479687 MROH2AA6NES4 1674 aa11.5□□□□□ -0.57
VAMP7-205ENST00000479687 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
VAMP7-205ENST00000479687 TROQ12816 1431 aaPredicted RBP11.5□□□□□ -0.57
VAMP7-205ENST00000479687 PLA2R1Q13018 1463 aa11.5□□□□□ -0.57
VAMP7-205ENST00000479687 ZNF142P52746 1687 aaPredicted RBP11.49□□□□□ -0.57
VAMP7-205ENST00000479687 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
VAMP7-205ENST00000479687 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
VAMP7-205ENST00000479687 CLIP1P30622 1438 aa11.48□□□□□ -0.57
VAMP7-205ENST00000479687 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
VAMP7-205ENST00000479687 CDC42BPBQ9Y5S2 1711 aa11.48□□□□□ -0.57
VAMP7-205ENST00000479687 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
VAMP7-205ENST00000479687 CCDC18Q5T9S5 1454 aa11.47□□□□□ -0.57
VAMP7-205ENST00000479687 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
VAMP7-205ENST00000479687 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
VAMP7-205ENST00000479687 ABCC1P33527 1531 aa11.46□□□□□ -0.57
VAMP7-205ENST00000479687 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
VAMP7-205ENST00000479687 CPS1P31327 1500 aa11.45□□□□□ -0.58
VAMP7-205ENST00000479687 CASKIN1Q8WXD9 1431 aa11.44□□□□□ -0.58
VAMP7-205ENST00000479687 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
VAMP7-205ENST00000479687 SHANK2Q9UPX8 1470 aa11.44□□□□□ -0.58
VAMP7-205ENST00000479687 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
VAMP7-205ENST00000479687 GGT6Q6P531 493 aa11.43□□□□□ -0.58
VAMP7-205ENST00000479687 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
VAMP7-205ENST00000479687 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
VAMP7-205ENST00000479687 CDC42BPAQ5VT25 1732 aa11.43□□□□□ -0.58
VAMP7-205ENST00000479687 FYCO1Q9BQS8 1478 aa11.42□□□□□ -0.58
VAMP7-205ENST00000479687 EVX2Q03828 476 aa11.41□□□□□ -0.58
VAMP7-205ENST00000479687 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
VAMP7-205ENST00000479687 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
VAMP7-205ENST00000479687 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
VAMP7-205ENST00000479687 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
VAMP7-205ENST00000479687 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.58
VAMP7-205ENST00000479687 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
VAMP7-205ENST00000479687 ALKQ9UM73 1620 aa11.39□□□□□ -0.59
VAMP7-205ENST00000479687 LHX8Q68G74 356 aa11.38□□□□□ -0.59
VAMP7-205ENST00000479687 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
VAMP7-205ENST00000479687 HNRNPMP52272 730 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■□□□ 12.5
VAMP7-205ENST00000479687 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
VAMP7-205ENST00000479687 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
VAMP7-205ENST00000479687 A2MP01023 1474 aa11.36□□□□□ -0.59
VAMP7-205ENST00000479687 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
VAMP7-205ENST00000479687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.35□□□□□ -0.59
VAMP7-205ENST00000479687 PLXNC1O60486 1568 aa11.35□□□□□ -0.59
VAMP7-205ENST00000479687 FBXO31Q5XUX0 539 aaPredicted RBP11.34□□□□□ -0.59
VAMP7-205ENST00000479687 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
VAMP7-205ENST00000479687 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
VAMP7-205ENST00000479687 TNRQ92752 1358 aa11.33□□□□□ -0.6
VAMP7-205ENST00000479687 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
VAMP7-205ENST00000479687 RNF17Q9BXT8 1623 aaKnown RBP11.33□□□□□ -0.6
VAMP7-205ENST00000479687 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
VAMP7-205ENST00000479687 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
VAMP7-205ENST00000479687 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
VAMP7-205ENST00000479687 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
VAMP7-205ENST00000479687 KIAA1107Q9UPP5 1409 aa11.32□□□□□ -0.6
VAMP7-205ENST00000479687 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
VAMP7-205ENST00000479687 LRRC7Q96NW7 1537 aa11.31□□□□□ -0.6
VAMP7-205ENST00000479687 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
VAMP7-205ENST00000479687 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
VAMP7-205ENST00000479687 THEMISQ8N1K5 641 aaPredicted RBP11.3□□□□□ -0.6
VAMP7-205ENST00000479687 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
VAMP7-205ENST00000479687 SYNMO15061 1565 aa11.28□□□□□ -0.6
VAMP7-205ENST00000479687 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
VAMP7-205ENST00000479687 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
VAMP7-205ENST00000479687 DEPDC5O75140 1603 aa11.27□□□□□ -0.6
VAMP7-205ENST00000479687 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
VAMP7-205ENST00000479687 CFDP1Q9UEE9 299 aaPredicted RBP11.27□□□□□ -0.61
VAMP7-205ENST00000479687 MED14O60244 1454 aa11.26□□□□□ -0.61
VAMP7-205ENST00000479687 PZPP20742 1482 aa11.26□□□□□ -0.61
VAMP7-205ENST00000479687 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
VAMP7-205ENST00000479687 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
VAMP7-205ENST00000479687 KIF3BO15066 747 aa11.25□□□□□ -0.61
VAMP7-205ENST00000479687 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
VAMP7-205ENST00000479687 KDM5DQ9BY66 1539 aa11.25□□□□□ -0.61
VAMP7-205ENST00000479687 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
VAMP7-205ENST00000479687 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
VAMP7-205ENST00000479687 CEP162Q5TB80 1403 aa11.24□□□□□ -0.61
VAMP7-205ENST00000479687 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
VAMP7-205ENST00000479687 NLRP1Q9C000 1473 aa11.24□□□□□ -0.61
VAMP7-205ENST00000479687 RTEL1-TNFRSF6BF6WH68 1400 aa11.22□□□□□ -0.61
VAMP7-205ENST00000479687 ZNF644Q9H582 1327 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-205ENST00000479687 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-205ENST00000479687 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
VAMP7-205ENST00000479687 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
VAMP7-205ENST00000479687 MBD5Q9P267 1494 aa11.2□□□□□ -0.62
VAMP7-205ENST00000479687 DHX29Q7Z478 1369 aaKnown RBP11.2□□□□□ -0.62
VAMP7-205ENST00000479687 TRIM52Q96A61 297 aa11.2□□□□□ -0.62
VAMP7-205ENST00000479687 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
VAMP7-205ENST00000479687 ROBO1Q9Y6N7 1651 aa11.19□□□□□ -0.62
VAMP7-205ENST00000479687 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
VAMP7-205ENST00000479687 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
VAMP7-205ENST00000479687 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
VAMP7-205ENST00000479687 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
VAMP7-205ENST00000479687 SCAF11Q99590 1463 aaKnown RBP11.17□□□□□ -0.62
VAMP7-205ENST00000479687 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
VAMP7-205ENST00000479687 GABBR2O75899 941 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms