RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 ATP10AO60312 1499 aa13.99□□□□□ -0.17
RAD51B-208ENST00000479335 EIF2AK4Q9P2K8 1649 aaKnown RBP13.97□□□□□ -0.17
RAD51B-208ENST00000479335 MLH3Q9UHC1 1453 aa13.97□□□□□ -0.17
RAD51B-208ENST00000479335 KDM5CP41229 1560 aa13.97□□□□□ -0.17
RAD51B-208ENST00000479335 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
RAD51B-208ENST00000479335 MAP3K4Q9Y6R4 1608 aa13.96□□□□□ -0.17
RAD51B-208ENST00000479335 POGZQ7Z3K3 1410 aa13.96□□□□□ -0.18
RAD51B-208ENST00000479335 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
RAD51B-208ENST00000479335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■□□□□ 10.2
RAD51B-208ENST00000479335 KANK1Q14678 1352 aa13.94□□□□□ -0.18
RAD51B-208ENST00000479335 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
RAD51B-208ENST00000479335 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAD51B-208ENST00000479335 MIER1Q8N108 512 aa13.93□□□□□ -0.18
RAD51B-208ENST00000479335 CCDC144AA2RUR9 1427 aa13.93□□□□□ -0.18
RAD51B-208ENST00000479335 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
RAD51B-208ENST00000479335 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
RAD51B-208ENST00000479335 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
RAD51B-208ENST00000479335 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
RAD51B-208ENST00000479335 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
RAD51B-208ENST00000479335 HECW2Q9P2P5 1572 aa13.9□□□□□ -0.18
RAD51B-208ENST00000479335 A2MP01023 1474 aa13.9□□□□□ -0.18
RAD51B-208ENST00000479335 KIF3BO15066 747 aa13.9□□□□□ -0.19
RAD51B-208ENST00000479335 PRDM15P57071 1507 aaPredicted RBP13.89□□□□□ -0.19
RAD51B-208ENST00000479335 TET3O43151 1660 aa13.89□□□□□ -0.19
RAD51B-208ENST00000479335 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
RAD51B-208ENST00000479335 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
RAD51B-208ENST00000479335 BCORL1Q5H9F3 1711 aa13.88□□□□□ -0.19
RAD51B-208ENST00000479335 PTPRTO14522 1441 aa13.88□□□□□ -0.19
RAD51B-208ENST00000479335 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
RAD51B-208ENST00000479335 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
RAD51B-208ENST00000479335 KCNA4P22459 653 aa13.86□□□□□ -0.19
RAD51B-208ENST00000479335 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
RAD51B-208ENST00000479335 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
RAD51B-208ENST00000479335 E9PCH4 1651 aa13.86□□□□□ -0.19
RAD51B-208ENST00000479335 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
RAD51B-208ENST00000479335 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
RAD51B-208ENST00000479335 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
RAD51B-208ENST00000479335 RICTORQ6R327 1708 aa13.85□□□□□ -0.19
RAD51B-208ENST00000479335 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
RAD51B-208ENST00000479335 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
RAD51B-208ENST00000479335 TRPM2O94759 1503 aa13.84□□□□□ -0.19
RAD51B-208ENST00000479335 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
RAD51B-208ENST00000479335 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
RAD51B-208ENST00000479335 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.2
RAD51B-208ENST00000479335 RAPGEF3O95398 923 aa13.82□□□□□ -0.2
RAD51B-208ENST00000479335 FRMPD1Q5SYB0 1578 aa13.82□□□□□ -0.2
RAD51B-208ENST00000479335 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
RAD51B-208ENST00000479335 ZMYM4Q5VZL5 1548 aa13.82□□□□□ -0.2
RAD51B-208ENST00000479335 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
RAD51B-208ENST00000479335 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
RAD51B-208ENST00000479335 PRAG1Q86YV5 1406 aa13.79□□□□□ -0.2
RAD51B-208ENST00000479335 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
RAD51B-208ENST00000479335 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
RAD51B-208ENST00000479335 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
RAD51B-208ENST00000479335 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
RAD51B-208ENST00000479335 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
RAD51B-208ENST00000479335 CEP152O94986 1710 aa13.79□□□□□ -0.2
RAD51B-208ENST00000479335 POLR1AO95602 1720 aaPredicted RBP13.79□□□□□ -0.2
RAD51B-208ENST00000479335 USP47Q96K76 1375 aa13.78□□□□□ -0.2
RAD51B-208ENST00000479335 RGL3Q3MIN7 710 aa13.78□□□□□ -0.2
RAD51B-208ENST00000479335 ZNF326Q5BKZ1 582 aaKnown RBP13.78□□□□□ -0.2
RAD51B-208ENST00000479335 MSH5O43196 834 aa13.77□□□□□ -0.21
RAD51B-208ENST00000479335 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
RAD51B-208ENST00000479335 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.21
RAD51B-208ENST00000479335 TRPM1Q7Z4N2 1603 aa13.77□□□□□ -0.21
RAD51B-208ENST00000479335 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
RAD51B-208ENST00000479335 LAMC1P11047 1609 aa13.76□□□□□ -0.21
RAD51B-208ENST00000479335 CLTCL1P53675 1640 aa13.76□□□□□ -0.21
RAD51B-208ENST00000479335 ANP32CO43423 234 aa13.75□□□□□ -0.21
RAD51B-208ENST00000479335 GGT6Q6P531 493 aa13.75□□□□□ -0.21
RAD51B-208ENST00000479335 REREQ9P2R6 1566 aa13.75□□□□□ -0.21
RAD51B-208ENST00000479335 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
RAD51B-208ENST00000479335 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
RAD51B-208ENST00000479335 ABCC3O15438 1527 aa13.74□□□□□ -0.21
RAD51B-208ENST00000479335 ROCK2O75116 1388 aaKnown RBP13.74□□□□□ -0.21
RAD51B-208ENST00000479335 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
RAD51B-208ENST00000479335 TSPOAP1O95153 1857 aa13.73□□□□□ -0.21
RAD51B-208ENST00000479335 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
RAD51B-208ENST00000479335 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
RAD51B-208ENST00000479335 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
RAD51B-208ENST00000479335 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
RAD51B-208ENST00000479335 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
RAD51B-208ENST00000479335 KIF1BO60333 1816 aa13.71□□□□□ -0.21
RAD51B-208ENST00000479335 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
RAD51B-208ENST00000479335 NPATQ14207 1427 aa13.71□□□□□ -0.21
RAD51B-208ENST00000479335 AGLP35573 1532 aa13.71□□□□□ -0.21
RAD51B-208ENST00000479335 CAMSAP1Q5T5Y3 1602 aa13.7□□□□□ -0.22
RAD51B-208ENST00000479335 NOS1P29475 1434 aa13.69□□□□□ -0.22
RAD51B-208ENST00000479335 MYOM2P54296 1465 aa13.68□□□□□ -0.22
RAD51B-208ENST00000479335 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
RAD51B-208ENST00000479335 KIAA1210Q9ULL0 1709 aa13.67□□□□□ -0.22
RAD51B-208ENST00000479335 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
RAD51B-208ENST00000479335 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
RAD51B-208ENST00000479335 RPGRIP1LQ68CZ1 1315 aa13.67□□□□□ -0.22
RAD51B-208ENST00000479335 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
RAD51B-208ENST00000479335 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
RAD51B-208ENST00000479335 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
RAD51B-208ENST00000479335 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
RAD51B-208ENST00000479335 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
RAD51B-208ENST00000479335 PIK3C2BO00750 1634 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms