RNA–Protein interactions for RNA: ENST00000479207.1

NELFCD-207, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 3

Gene NELFCD, Length 1,112 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-207ENST00000479207 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
NELFCD-207ENST00000479207 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
NELFCD-207ENST00000479207 MED14O60244 1454 aa18.41■□□□□ 0.54
NELFCD-207ENST00000479207 SRCAPQ6ZRS2 3230 aa18.41■□□□□ 0.54
NELFCD-207ENST00000479207 NPHP4O75161 1426 aaPredicted RBP18.39■□□□□ 0.53
NELFCD-207ENST00000479207 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
NELFCD-207ENST00000479207 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
NELFCD-207ENST00000479207 TNRQ92752 1358 aa18.38■□□□□ 0.53
NELFCD-207ENST00000479207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.53
NELFCD-207ENST00000479207 PZPP20742 1482 aa18.38■□□□□ 0.53
NELFCD-207ENST00000479207 GGT6Q6P531 493 aa18.37■□□□□ 0.53
NELFCD-207ENST00000479207 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
NELFCD-207ENST00000479207 ZC3H13Q5T200 1668 aaKnown RBP18.37■□□□□ 0.53
NELFCD-207ENST00000479207 POTEAQ6S8J7 498 aa18.35■□□□□ 0.53
NELFCD-207ENST00000479207 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
NELFCD-207ENST00000479207 KDM5DQ9BY66 1539 aa18.34■□□□□ 0.53
NELFCD-207ENST00000479207 HNRNPMP52272 730 aaKnown RBP eCLIP18.34■□□□□ 0.53
NELFCD-207ENST00000479207 KIAA1107Q9UPP5 1409 aa18.33■□□□□ 0.53
NELFCD-207ENST00000479207 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
NELFCD-207ENST00000479207 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
NELFCD-207ENST00000479207 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
NELFCD-207ENST00000479207 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
NELFCD-207ENST00000479207 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
NELFCD-207ENST00000479207 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
NELFCD-207ENST00000479207 NLRP1Q9C000 1473 aa18.3■□□□□ 0.52
NELFCD-207ENST00000479207 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
NELFCD-207ENST00000479207 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
NELFCD-207ENST00000479207 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
NELFCD-207ENST00000479207 ROBO1Q9Y6N7 1651 aa18.23■□□□□ 0.51
NELFCD-207ENST00000479207 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
NELFCD-207ENST00000479207 UBR1Q8IWV7 1749 aa18.22■□□□□ 0.51
NELFCD-207ENST00000479207 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
NELFCD-207ENST00000479207 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
NELFCD-207ENST00000479207 DHX29Q7Z478 1369 aaKnown RBP18.2■□□□□ 0.5
NELFCD-207ENST00000479207 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
NELFCD-207ENST00000479207 RTEL1-TNFRSF6BF6WH68 1400 aa18.17■□□□□ 0.5
NELFCD-207ENST00000479207 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
NELFCD-207ENST00000479207 MAP3K1Q13233 1512 aa18.17■□□□□ 0.5
NELFCD-207ENST00000479207 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
NELFCD-207ENST00000479207 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-207ENST00000479207 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
NELFCD-207ENST00000479207 ERVK-7P63135 1459 aa18.14■□□□□ 0.5
NELFCD-207ENST00000479207 ABCC3O15438 1527 aa18.14■□□□□ 0.49
NELFCD-207ENST00000479207 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
NELFCD-207ENST00000479207 KIF3BO15066 747 aa18.13■□□□□ 0.49
NELFCD-207ENST00000479207 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
NELFCD-207ENST00000479207 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
NELFCD-207ENST00000479207 WASHC2CQ9Y4E1 1318 aa18.11■□□□□ 0.49
NELFCD-207ENST00000479207 SLIT1O75093 1534 aa18.11■□□□□ 0.49
NELFCD-207ENST00000479207 MROH1Q8NDA8 1641 aa18.1■□□□□ 0.49
NELFCD-207ENST00000479207 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■□□□□ 9.8
NELFCD-207ENST00000479207 CEP152O94986 1710 aa18.09■□□□□ 0.49
NELFCD-207ENST00000479207 LRP6O75581 1613 aa18.09■□□□□ 0.49
NELFCD-207ENST00000479207 CCDC141Q6ZP82 1450 aa18.09■□□□□ 0.49
NELFCD-207ENST00000479207 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
NELFCD-207ENST00000479207 COL16A1Q07092 1604 aaPredicted RBP18.08■□□□□ 0.48
NELFCD-207ENST00000479207 TMEM94Q12767 1356 aa18.06■□□□□ 0.48
NELFCD-207ENST00000479207 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
NELFCD-207ENST00000479207 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
NELFCD-207ENST00000479207 LTKP29376 864 aa18.05■□□□□ 0.48
NELFCD-207ENST00000479207 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
NELFCD-207ENST00000479207 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
NELFCD-207ENST00000479207 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
NELFCD-207ENST00000479207 PIK3C2BO00750 1634 aa18.01■□□□□ 0.47
NELFCD-207ENST00000479207 EIF2AK4Q9P2K8 1649 aaKnown RBP18.01■□□□□ 0.47
NELFCD-207ENST00000479207 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
NELFCD-207ENST00000479207 JCADQ9P266 1359 aa18■□□□□ 0.47
NELFCD-207ENST00000479207 PRDM15P57071 1507 aaPredicted RBP17.99■□□□□ 0.47
NELFCD-207ENST00000479207 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
NELFCD-207ENST00000479207 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
NELFCD-207ENST00000479207 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
NELFCD-207ENST00000479207 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
NELFCD-207ENST00000479207 RBM33Q96EV2 1170 aaKnown RBP17.97■□□□□ 0.47
NELFCD-207ENST00000479207 TET3O43151 1660 aa17.96■□□□□ 0.47
NELFCD-207ENST00000479207 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
NELFCD-207ENST00000479207 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
NELFCD-207ENST00000479207 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
NELFCD-207ENST00000479207 CDK12Q9NYV4 1490 aaPredicted RBP17.93■□□□□ 0.46
NELFCD-207ENST00000479207 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
NELFCD-207ENST00000479207 APLP2Q06481 763 aa17.91■□□□□ 0.46
NELFCD-207ENST00000479207 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
NELFCD-207ENST00000479207 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
NELFCD-207ENST00000479207 EP400Q96L91 3159 aa17.9■□□□□ 0.46
NELFCD-207ENST00000479207 EFCAB6Q5THR3 1501 aa17.89■□□□□ 0.45
NELFCD-207ENST00000479207 DIP2AQ14689 1571 aa17.89■□□□□ 0.45
NELFCD-207ENST00000479207 KCNA6P17658 529 aa17.88■□□□□ 0.45
NELFCD-207ENST00000479207 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
NELFCD-207ENST00000479207 MSH6P52701 1360 aa17.88■□□□□ 0.45
NELFCD-207ENST00000479207 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
NELFCD-207ENST00000479207 RGS12O14924 1447 aa17.87■□□□□ 0.45
NELFCD-207ENST00000479207 ARHGAP31Q2M1Z3 1444 aa17.87■□□□□ 0.45
NELFCD-207ENST00000479207 PROSER2Q86WR7 435 aaPredicted RBP17.86■□□□□ 0.45
NELFCD-207ENST00000479207 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
NELFCD-207ENST00000479207 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
NELFCD-207ENST00000479207 SLAIN2Q9P270 581 aa17.85■□□□□ 0.45
NELFCD-207ENST00000479207 MEX3CQ5U5Q3 659 aaKnown RBP17.84■□□□□ 0.45
NELFCD-207ENST00000479207 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
NELFCD-207ENST00000479207 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
NELFCD-207ENST00000479207 RXRBP28702 533 aa17.82■□□□□ 0.44
NELFCD-207ENST00000479207 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms