RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
FXR1-213ENST00000479176 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
FXR1-213ENST00000479176 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
FXR1-213ENST00000479176 FER1L4A9Z1Z3 1794 aa16.58■□□□□ 0.24
FXR1-213ENST00000479176 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
FXR1-213ENST00000479176 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
FXR1-213ENST00000479176 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
FXR1-213ENST00000479176 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
FXR1-213ENST00000479176 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
FXR1-213ENST00000479176 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
FXR1-213ENST00000479176 MLECQ14165 292 aa16.52■□□□□ 0.24
FXR1-213ENST00000479176 A2MP01023 1474 aa16.52■□□□□ 0.23
FXR1-213ENST00000479176 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
FXR1-213ENST00000479176 PTPN23Q9H3S7 1636 aa16.51■□□□□ 0.23
FXR1-213ENST00000479176 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
FXR1-213ENST00000479176 TCOF1Q13428 1488 aaKnown RBP16.49■□□□□ 0.23
FXR1-213ENST00000479176 CROCC2H7BZ55 1655 aa16.47■□□□□ 0.23
FXR1-213ENST00000479176 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
FXR1-213ENST00000479176 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
FXR1-213ENST00000479176 SHANK2Q9UPX8 1470 aa16.44■□□□□ 0.22
FXR1-213ENST00000479176 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
FXR1-213ENST00000479176 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
FXR1-213ENST00000479176 MROH2AA6NES4 1674 aa16.43■□□□□ 0.22
FXR1-213ENST00000479176 ABCC5O15440 1437 aa16.43■□□□□ 0.22
FXR1-213ENST00000479176 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
FXR1-213ENST00000479176 C3P01024 1663 aa16.43■□□□□ 0.22
FXR1-213ENST00000479176 DAPK1P53355 1430 aa16.4■□□□□ 0.22
FXR1-213ENST00000479176 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FXR1-213ENST00000479176 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FXR1-213ENST00000479176 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FXR1-213ENST00000479176 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
FXR1-213ENST00000479176 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
FXR1-213ENST00000479176 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
FXR1-213ENST00000479176 EIF2AK4Q9P2K8 1649 aaKnown RBP16.38■□□□□ 0.21
FXR1-213ENST00000479176 PREX1Q8TCU6 1659 aa16.37■□□□□ 0.21
FXR1-213ENST00000479176 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
FXR1-213ENST00000479176 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
FXR1-213ENST00000479176 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
FXR1-213ENST00000479176 DUOX2Q9NRD8 1548 aa16.36■□□□□ 0.21
FXR1-213ENST00000479176 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
FXR1-213ENST00000479176 ESF1Q9H501 851 aaKnown RBP16.36■□□□□ 0.21
FXR1-213ENST00000479176 GGT6Q6P531 493 aa16.35■□□□□ 0.21
FXR1-213ENST00000479176 KIF3BO15066 747 aa16.34■□□□□ 0.21
FXR1-213ENST00000479176 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
FXR1-213ENST00000479176 KIF15Q9NS87 1388 aa16.33■□□□□ 0.2
FXR1-213ENST00000479176 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
FXR1-213ENST00000479176 KDM5DQ9BY66 1539 aa16.33■□□□□ 0.2
FXR1-213ENST00000479176 MROH1Q8NDA8 1641 aa16.32■□□□□ 0.2
FXR1-213ENST00000479176 NPATQ14207 1427 aa16.31■□□□□ 0.2
FXR1-213ENST00000479176 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
FXR1-213ENST00000479176 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
FXR1-213ENST00000479176 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
FXR1-213ENST00000479176 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
FXR1-213ENST00000479176 NCOA1Q15788 1441 aa16.29■□□□□ 0.2
FXR1-213ENST00000479176 ANKRD30AQ9BXX3 1397 aa16.29■□□□□ 0.2
FXR1-213ENST00000479176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■□□□□ 8.8
FXR1-213ENST00000479176 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
FXR1-213ENST00000479176 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
FXR1-213ENST00000479176 RBM42Q9BTD8 480 aaKnown RBP16.28■□□□□ 0.2
FXR1-213ENST00000479176 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
FXR1-213ENST00000479176 RRP7BPQ9NSQ0 103 aa16.27■□□□□ 0.2
FXR1-213ENST00000479176 ABCC3O15438 1527 aa16.27■□□□□ 0.2
FXR1-213ENST00000479176 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
FXR1-213ENST00000479176 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
FXR1-213ENST00000479176 SSUH2Q9Y2M2 353 aa16.26■□□□□ 0.19
FXR1-213ENST00000479176 PZPP20742 1482 aa16.25■□□□□ 0.19
FXR1-213ENST00000479176 MYO3AQ8NEV4 1616 aa16.25■□□□□ 0.19
FXR1-213ENST00000479176 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
FXR1-213ENST00000479176 CEP152O94986 1710 aa16.25■□□□□ 0.19
FXR1-213ENST00000479176 ZNF142P52746 1687 aaPredicted RBP16.24■□□□□ 0.19
FXR1-213ENST00000479176 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
FXR1-213ENST00000479176 HSPA2P54652 639 aa16.24■□□□□ 0.19
FXR1-213ENST00000479176 PROM2Q8N271 834 aa16.24■□□□□ 0.19
FXR1-213ENST00000479176 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
FXR1-213ENST00000479176 CAMSAP1Q5T5Y3 1602 aa16.22■□□□□ 0.19
FXR1-213ENST00000479176 VWDEQ8N2E2 1590 aa16.21■□□□□ 0.18
FXR1-213ENST00000479176 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
FXR1-213ENST00000479176 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
FXR1-213ENST00000479176 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
FXR1-213ENST00000479176 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
FXR1-213ENST00000479176 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
FXR1-213ENST00000479176 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
FXR1-213ENST00000479176 TNRQ92752 1358 aa16.17■□□□□ 0.18
FXR1-213ENST00000479176 ARHGAP31Q2M1Z3 1444 aa16.17■□□□□ 0.18
FXR1-213ENST00000479176 CFAP65Q6ZU64 1925 aaKnown RBP16.16■□□□□ 0.18
FXR1-213ENST00000479176 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
FXR1-213ENST00000479176 UNC13BO14795 1591 aa16.15■□□□□ 0.18
FXR1-213ENST00000479176 ERVK-7P63135 1459 aa16.15■□□□□ 0.18
FXR1-213ENST00000479176 KANK1Q14678 1352 aa16.14■□□□□ 0.17
FXR1-213ENST00000479176 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
FXR1-213ENST00000479176 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
FXR1-213ENST00000479176 ITGAEP38570 1179 aa16.12■□□□□ 0.17
FXR1-213ENST00000479176 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
FXR1-213ENST00000479176 FBXO3Q9UK99 471 aa16.1■□□□□ 0.17
FXR1-213ENST00000479176 TET3O43151 1660 aa16.1■□□□□ 0.17
FXR1-213ENST00000479176 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
FXR1-213ENST00000479176 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
FXR1-213ENST00000479176 PTPRTO14522 1441 aa16.09■□□□□ 0.17
FXR1-213ENST00000479176 IQGAP3Q86VI3 1631 aa16.08■□□□□ 0.17
FXR1-213ENST00000479176 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms