RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 CAMSAP2Q08AD1 1489 aa17.75■□□□□ 0.43
HDLBP-237ENST00000479169 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
HDLBP-237ENST00000479169 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
HDLBP-237ENST00000479169 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
HDLBP-237ENST00000479169 KDM5DQ9BY66 1539 aa17.73■□□□□ 0.43
HDLBP-237ENST00000479169 KIF3BO15066 747 aa17.73■□□□□ 0.43
HDLBP-237ENST00000479169 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
HDLBP-237ENST00000479169 PZPP20742 1482 aa17.72■□□□□ 0.43
HDLBP-237ENST00000479169 TNRQ92752 1358 aa17.72■□□□□ 0.43
HDLBP-237ENST00000479169 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
HDLBP-237ENST00000479169 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
HDLBP-237ENST00000479169 WASHC2CQ9Y4E1 1318 aa17.67■□□□□ 0.42
HDLBP-237ENST00000479169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDLBP-237ENST00000479169 SHANK2Q9UPX8 1470 aa17.65■□□□□ 0.42
HDLBP-237ENST00000479169 CPS1P31327 1500 aa17.65■□□□□ 0.42
HDLBP-237ENST00000479169 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
HDLBP-237ENST00000479169 PIP4K2BP78356 416 aa17.64■□□□□ 0.41
HDLBP-237ENST00000479169 VWDEQ8N2E2 1590 aa17.64■□□□□ 0.41
HDLBP-237ENST00000479169 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
HDLBP-237ENST00000479169 MIA2Q96PC5 1412 aa17.64■□□□□ 0.41
HDLBP-237ENST00000479169 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
HDLBP-237ENST00000479169 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
HDLBP-237ENST00000479169 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
HDLBP-237ENST00000479169 HSPA1LP34931 641 aa17.62■□□□□ 0.41
HDLBP-237ENST00000479169 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
HDLBP-237ENST00000479169 DEPDC5O75140 1603 aa17.61■□□□□ 0.41
HDLBP-237ENST00000479169 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
HDLBP-237ENST00000479169 NPHP4O75161 1426 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-237ENST00000479169 ABCC3O15438 1527 aa17.6■□□□□ 0.41
HDLBP-237ENST00000479169 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-237ENST00000479169 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
HDLBP-237ENST00000479169 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
HDLBP-237ENST00000479169 CEP152O94986 1710 aa17.59■□□□□ 0.41
HDLBP-237ENST00000479169 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
HDLBP-237ENST00000479169 MAST1Q9Y2H9 1570 aa17.59■□□□□ 0.41
HDLBP-237ENST00000479169 TSPY4P0CV99 314 aa17.59■□□□□ 0.41
HDLBP-237ENST00000479169 TSPY10P0CW01 314 aa17.59■□□□□ 0.41
HDLBP-237ENST00000479169 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-237ENST00000479169 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
HDLBP-237ENST00000479169 MED14O60244 1454 aa17.58■□□□□ 0.41
HDLBP-237ENST00000479169 LRRC9Q6ZRR7 1453 aa17.58■□□□□ 0.41
HDLBP-237ENST00000479169 TOM1O60784 492 aa17.58■□□□□ 0.4
HDLBP-237ENST00000479169 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.4
HDLBP-237ENST00000479169 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
HDLBP-237ENST00000479169 ERVK-7P63135 1459 aa17.56■□□□□ 0.4
HDLBP-237ENST00000479169 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
HDLBP-237ENST00000479169 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
HDLBP-237ENST00000479169 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-237ENST00000479169 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
HDLBP-237ENST00000479169 SYNMO15061 1565 aa17.49■□□□□ 0.39
HDLBP-237ENST00000479169 MYOM3Q5VTT5 1437 aa17.49■□□□□ 0.39
HDLBP-237ENST00000479169 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
HDLBP-237ENST00000479169 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-237ENST00000479169 DUOX2Q9NRD8 1548 aa17.48■□□□□ 0.39
HDLBP-237ENST00000479169 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
HDLBP-237ENST00000479169 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
HDLBP-237ENST00000479169 XIRP1Q702N8 1843 aaKnown RBP17.46■□□□□ 0.39
HDLBP-237ENST00000479169 MAP3K1Q13233 1512 aa17.46■□□□□ 0.39
HDLBP-237ENST00000479169 PRDM15P57071 1507 aaPredicted RBP17.45■□□□□ 0.38
HDLBP-237ENST00000479169 KIF15Q9NS87 1388 aa17.43■□□□□ 0.38
HDLBP-237ENST00000479169 LTKP29376 864 aa17.43■□□□□ 0.38
HDLBP-237ENST00000479169 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
HDLBP-237ENST00000479169 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
HDLBP-237ENST00000479169 SLIT1O75093 1534 aa17.42■□□□□ 0.38
HDLBP-237ENST00000479169 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
HDLBP-237ENST00000479169 PTPN23Q9H3S7 1636 aa17.42■□□□□ 0.38
HDLBP-237ENST00000479169 ABCC5O15440 1437 aa17.41■□□□□ 0.38
HDLBP-237ENST00000479169 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
HDLBP-237ENST00000479169 TXNDC2Q86VQ3 553 aa17.4■□□□□ 0.38
HDLBP-237ENST00000479169 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
HDLBP-237ENST00000479169 ERBINQ96RT1 1412 aa17.39■□□□□ 0.38
HDLBP-237ENST00000479169 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.374e-11■■□□□ 13.4
HDLBP-237ENST00000479169 DAPK1P53355 1430 aa17.36■□□□□ 0.37
HDLBP-237ENST00000479169 TMEM2Q9UHN6 1383 aa17.34■□□□□ 0.37
HDLBP-237ENST00000479169 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
HDLBP-237ENST00000479169 KDM5AP29375 1690 aaKnown RBP17.33■□□□□ 0.37
HDLBP-237ENST00000479169 EFCAB6Q5THR3 1501 aa17.32■□□□□ 0.36
HDLBP-237ENST00000479169 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
HDLBP-237ENST00000479169 KANK1Q14678 1352 aa17.32■□□□□ 0.36
HDLBP-237ENST00000479169 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
HDLBP-237ENST00000479169 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
HDLBP-237ENST00000479169 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
HDLBP-237ENST00000479169 IDI1Q13907 227 aa17.3■□□□□ 0.36
HDLBP-237ENST00000479169 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
HDLBP-237ENST00000479169 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
HDLBP-237ENST00000479169 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
HDLBP-237ENST00000479169 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
HDLBP-237ENST00000479169 TET3O43151 1660 aa17.28■□□□□ 0.36
HDLBP-237ENST00000479169 ADGRB3O60242 1522 aa17.27■□□□□ 0.36
HDLBP-237ENST00000479169 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.36
HDLBP-237ENST00000479169 APLP2Q06481 763 aa17.27■□□□□ 0.36
HDLBP-237ENST00000479169 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
HDLBP-237ENST00000479169 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.36
HDLBP-237ENST00000479169 NOS1P29475 1434 aa17.27■□□□□ 0.35
HDLBP-237ENST00000479169 FAM135BQ49AJ0 1406 aa17.26■□□□□ 0.35
HDLBP-237ENST00000479169 NWD1Q149M9 1564 aa17.24■□□□□ 0.35
HDLBP-237ENST00000479169 KCNA6P17658 529 aa17.24■□□□□ 0.35
HDLBP-237ENST00000479169 PROSER2Q86WR7 435 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-237ENST00000479169 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
HDLBP-237ENST00000479169 GCC2Q8IWJ2 1684 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms