RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 PKD2Q13563 968 aa26.05■■□□□ 1.76
PHF1-207ENST00000479029 FBXO31Q5XUX0 539 aaPredicted RBP26.05■■□□□ 1.76
PHF1-207ENST00000479029 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
PHF1-207ENST00000479029 KDM5DQ9BY66 1539 aa26.04■■□□□ 1.76
PHF1-207ENST00000479029 MYO3AQ8NEV4 1616 aa26.03■■□□□ 1.76
PHF1-207ENST00000479029 CEP170BQ9Y4F5 1589 aaPredicted RBP26.03■■□□□ 1.76
PHF1-207ENST00000479029 PLA2R1Q13018 1463 aa26.01■■□□□ 1.75
PHF1-207ENST00000479029 TNRQ92752 1358 aa26.01■■□□□ 1.75
PHF1-207ENST00000479029 MAST1Q9Y2H9 1570 aa26.01■■□□□ 1.75
PHF1-207ENST00000479029 PZPP20742 1482 aa26■■□□□ 1.75
PHF1-207ENST00000479029 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
PHF1-207ENST00000479029 A2ML1A8K2U0 1454 aa25.99■■□□□ 1.75
PHF1-207ENST00000479029 TCOF1Q13428 1488 aaKnown RBP25.95■■□□□ 1.74
PHF1-207ENST00000479029 LTBP4Q8N2S1 1624 aa25.93■■□□□ 1.74
PHF1-207ENST00000479029 ABCC5O15440 1437 aa25.92■■□□□ 1.74
PHF1-207ENST00000479029 RRP7BPQ9NSQ0 103 aa25.91■■□□□ 1.74
PHF1-207ENST00000479029 DNMT1P26358 1616 aaKnown RBP25.91■■□□□ 1.74
PHF1-207ENST00000479029 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
PHF1-207ENST00000479029 DUOX2Q9NRD8 1548 aa25.9■■□□□ 1.74
PHF1-207ENST00000479029 RNF17Q9BXT8 1623 aaKnown RBP25.9■■□□□ 1.74
PHF1-207ENST00000479029 THEMISQ8N1K5 641 aaPredicted RBP25.9■■□□□ 1.74
PHF1-207ENST00000479029 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
PHF1-207ENST00000479029 ZNF335Q9H4Z2 1342 aaPredicted RBP25.89■■□□□ 1.74
PHF1-207ENST00000479029 PTPN23Q9H3S7 1636 aa25.89■■□□□ 1.74
PHF1-207ENST00000479029 SHANK2Q9UPX8 1470 aa25.89■■□□□ 1.73
PHF1-207ENST00000479029 ABCC3O15438 1527 aa25.88■■□□□ 1.73
PHF1-207ENST00000479029 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
PHF1-207ENST00000479029 NLRP1Q9C000 1473 aa25.88■■□□□ 1.73
PHF1-207ENST00000479029 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
PHF1-207ENST00000479029 DAPK1P53355 1430 aa25.86■■□□□ 1.73
PHF1-207ENST00000479029 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
PHF1-207ENST00000479029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.83■■□□□ 1.73
PHF1-207ENST00000479029 ERBINQ96RT1 1412 aa25.83■■□□□ 1.73
PHF1-207ENST00000479029 CHIC2Q9UKJ5 165 aa25.83■■□□□ 1.73
PHF1-207ENST00000479029 ZC3H13Q5T200 1668 aaKnown RBP25.82■■□□□ 1.72
PHF1-207ENST00000479029 UGGT1Q9NYU2 1555 aa25.81■■□□□ 1.72
PHF1-207ENST00000479029 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
PHF1-207ENST00000479029 ANKRD30AQ9BXX3 1397 aa25.81■■□□□ 1.72
PHF1-207ENST00000479029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.8■■□□□ 1.72
PHF1-207ENST00000479029 CROCC2H7BZ55 1655 aa25.78■■□□□ 1.72
PHF1-207ENST00000479029 ERVK-7P63135 1459 aa25.78■■□□□ 1.72
PHF1-207ENST00000479029 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
PHF1-207ENST00000479029 FAM50AQ14320 339 aaKnown RBP25.77■■□□□ 1.72
PHF1-207ENST00000479029 KANK1Q14678 1352 aa25.76■■□□□ 1.71
PHF1-207ENST00000479029 PRDM15P57071 1507 aaPredicted RBP25.73■■□□□ 1.71
PHF1-207ENST00000479029 ARHGAP31Q2M1Z3 1444 aa25.73■■□□□ 1.71
PHF1-207ENST00000479029 UBAP1LF5GYI3 381 aa25.73■■□□□ 1.71
PHF1-207ENST00000479029 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
PHF1-207ENST00000479029 CEP152O94986 1710 aa25.71■■□□□ 1.71
PHF1-207ENST00000479029 POLR1AO95602 1720 aaPredicted RBP25.71■■□□□ 1.71
PHF1-207ENST00000479029 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
PHF1-207ENST00000479029 MED14O60244 1454 aa25.7■■□□□ 1.7
PHF1-207ENST00000479029 CFAP65Q6ZU64 1925 aaKnown RBP25.67■■□□□ 1.7
PHF1-207ENST00000479029 DEPDC5O75140 1603 aa25.66■■□□□ 1.7
PHF1-207ENST00000479029 ADGRL2O95490 1459 aa25.65■■□□□ 1.7
PHF1-207ENST00000479029 CPS1P31327 1500 aa25.64■■□□□ 1.7
PHF1-207ENST00000479029 STAG3Q9UJ98 1225 aa25.62■■□□□ 1.69
PHF1-207ENST00000479029 TXNDC2Q86VQ3 553 aa25.61■■□□□ 1.69
PHF1-207ENST00000479029 LMTK2Q8IWU2 1503 aa25.6■■□□□ 1.69
PHF1-207ENST00000479029 EID1Q9Y6B2 187 aa25.6■■□□□ 1.69
PHF1-207ENST00000479029 ANKRD50Q9ULJ7 1429 aa25.6■■□□□ 1.69
PHF1-207ENST00000479029 TOM1O60784 492 aa25.59■■□□□ 1.69
PHF1-207ENST00000479029 LTKP29376 864 aa25.59■■□□□ 1.69
PHF1-207ENST00000479029 VWDEQ8N2E2 1590 aa25.59■■□□□ 1.69
PHF1-207ENST00000479029 UBR1Q8IWV7 1749 aa25.58■■□□□ 1.69
PHF1-207ENST00000479029 SCAF11Q99590 1463 aaKnown RBP25.58■■□□□ 1.69
PHF1-207ENST00000479029 IQGAP1P46940 1657 aa25.58■■□□□ 1.68
PHF1-207ENST00000479029 DISP3Q9P2K9 1392 aa25.57■■□□□ 1.68
PHF1-207ENST00000479029 IDI1Q13907 227 aa25.57■■□□□ 1.68
PHF1-207ENST00000479029 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
PHF1-207ENST00000479029 SLIT1O75093 1534 aa25.54■■□□□ 1.68
PHF1-207ENST00000479029 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
PHF1-207ENST00000479029 PIP4K2BP78356 416 aa25.53■■□□□ 1.68
PHF1-207ENST00000479029 TMEM2Q9UHN6 1383 aa25.53■■□□□ 1.68
PHF1-207ENST00000479029 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PHF1-207ENST00000479029 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
PHF1-207ENST00000479029 NOS1P29475 1434 aa25.51■■□□□ 1.67
PHF1-207ENST00000479029 PIK3C2BO00750 1634 aa25.5■■□□□ 1.67
PHF1-207ENST00000479029 EFCAB6Q5THR3 1501 aa25.5■■□□□ 1.67
PHF1-207ENST00000479029 ROCK1Q13464 1354 aa25.49■■□□□ 1.67
PHF1-207ENST00000479029 RPRD2Q5VT52 1461 aaKnown RBP25.47■■□□□ 1.67
PHF1-207ENST00000479029 ITGAEP38570 1179 aa25.46■■□□□ 1.67
PHF1-207ENST00000479029 SYNMO15061 1565 aa25.45■■□□□ 1.66
PHF1-207ENST00000479029 LRRC7Q96NW7 1537 aa25.44■■□□□ 1.66
PHF1-207ENST00000479029 HSPA1LP34931 641 aa25.44■■□□□ 1.66
PHF1-207ENST00000479029 KDM5AP29375 1690 aaKnown RBP25.42■■□□□ 1.66
PHF1-207ENST00000479029 STRCP1A6NGW2 1772 aa25.39■■□□□ 1.66
PHF1-207ENST00000479029 ILDR2Q71H61 639 aa25.38■■□□□ 1.65
PHF1-207ENST00000479029 TET3O43151 1660 aa25.38■■□□□ 1.65
PHF1-207ENST00000479029 ADGRB3O60242 1522 aa25.37■■□□□ 1.65
PHF1-207ENST00000479029 HDGFP51858 240 aaKnown RBP25.37■■□□□ 1.65
PHF1-207ENST00000479029 BCANQ96GW7 911 aa25.37■■□□□ 1.65
PHF1-207ENST00000479029 SLC26A8Q96RN1 970 aa25.37■■□□□ 1.65
PHF1-207ENST00000479029 UNC13BO14795 1591 aa25.36■■□□□ 1.65
PHF1-207ENST00000479029 NUP155O75694 1391 aa25.36■■□□□ 1.65
PHF1-207ENST00000479029 KCNA6P17658 529 aa25.35■■□□□ 1.65
PHF1-207ENST00000479029 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
PHF1-207ENST00000479029 CHGAP10645 457 aaKnown RBP25.32■■□□□ 1.64
PHF1-207ENST00000479029 ALKQ9UM73 1620 aa25.32■■□□□ 1.64
PHF1-207ENST00000479029 GCC2Q8IWJ2 1684 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms