RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 FGD6Q6ZV73 1430 aa31.84■■■□□ 2.69
TRIM8-203ENST00000479004 WASHC2CQ9Y4E1 1318 aa31.84■■■□□ 2.69
TRIM8-203ENST00000479004 ZNF142P52746 1687 aaPredicted RBP31.84■■■□□ 2.69
TRIM8-203ENST00000479004 ABCC5O15440 1437 aa31.83■■■□□ 2.69
TRIM8-203ENST00000479004 TCOF1Q13428 1488 aaKnown RBP31.83■■■□□ 2.69
TRIM8-203ENST00000479004 PTPRTO14522 1441 aa31.83■■■□□ 2.69
TRIM8-203ENST00000479004 CAMSAP1Q5T5Y3 1602 aa31.82■■■□□ 2.69
TRIM8-203ENST00000479004 CROCC2H7BZ55 1655 aa31.82■■■□□ 2.68
TRIM8-203ENST00000479004 RNF17Q9BXT8 1623 aaKnown RBP31.82■■■□□ 2.68
TRIM8-203ENST00000479004 EIF2AK4Q9P2K8 1649 aaKnown RBP31.82■■■□□ 2.68
TRIM8-203ENST00000479004 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
TRIM8-203ENST00000479004 SHANK2Q9UPX8 1470 aa31.8■■■□□ 2.68
TRIM8-203ENST00000479004 PZPP20742 1482 aa31.79■■■□□ 2.68
TRIM8-203ENST00000479004 CERKQ8TCT0 537 aa31.78■■■□□ 2.68
TRIM8-203ENST00000479004 DUOX2Q9NRD8 1548 aa31.78■■■□□ 2.68
TRIM8-203ENST00000479004 FBXO31Q5XUX0 539 aaPredicted RBP31.77■■■□□ 2.68
TRIM8-203ENST00000479004 DNMT1P26358 1616 aaKnown RBP31.77■■■□□ 2.68
TRIM8-203ENST00000479004 DAPK1P53355 1430 aa31.76■■■□□ 2.68
TRIM8-203ENST00000479004 KIF15Q9NS87 1388 aa31.73■■■□□ 2.67
TRIM8-203ENST00000479004 A2ML1A8K2U0 1454 aa31.72■■■□□ 2.67
TRIM8-203ENST00000479004 PLA2R1Q13018 1463 aa31.72■■■□□ 2.67
TRIM8-203ENST00000479004 MROH1Q8NDA8 1641 aa31.72■■■□□ 2.67
TRIM8-203ENST00000479004 TNRQ92752 1358 aa31.72■■■□□ 2.67
TRIM8-203ENST00000479004 ZC3H13Q5T200 1668 aaKnown RBP31.72■■■□□ 2.67
TRIM8-203ENST00000479004 ABCC3O15438 1527 aa31.71■■■□□ 2.67
TRIM8-203ENST00000479004 RRP7BPQ9NSQ0 103 aa31.7■■■□□ 2.67
TRIM8-203ENST00000479004 NCKAP5LQ9HCH0 1330 aa31.7■■■□□ 2.66
TRIM8-203ENST00000479004 ERBINQ96RT1 1412 aa31.67■■■□□ 2.66
TRIM8-203ENST00000479004 PKD2Q13563 968 aa31.66■■■□□ 2.66
TRIM8-203ENST00000479004 CEP152O94986 1710 aa31.63■■■□□ 2.65
TRIM8-203ENST00000479004 ANKRD30AQ9BXX3 1397 aa31.62■■■□□ 2.65
TRIM8-203ENST00000479004 CHIC2Q9UKJ5 165 aa31.62■■■□□ 2.65
TRIM8-203ENST00000479004 PRDM15P57071 1507 aaPredicted RBP31.59■■■□□ 2.65
TRIM8-203ENST00000479004 NLRP1Q9C000 1473 aa31.59■■■□□ 2.65
TRIM8-203ENST00000479004 LTBP4Q8N2S1 1624 aa31.59■■■□□ 2.65
TRIM8-203ENST00000479004 SPATA31D1Q6ZQQ2 1576 aa31.59■■■□□ 2.65
TRIM8-203ENST00000479004 FAM50AQ14320 339 aaKnown RBP31.58■■■□□ 2.65
TRIM8-203ENST00000479004 DEPDC5O75140 1603 aa31.57■■■□□ 2.64
TRIM8-203ENST00000479004 ADGRL2O95490 1459 aa31.55■■■□□ 2.64
TRIM8-203ENST00000479004 ERVK-7P63135 1459 aa31.55■■■□□ 2.64
TRIM8-203ENST00000479004 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
TRIM8-203ENST00000479004 UGGT1Q9NYU2 1555 aa31.52■■■□□ 2.64
TRIM8-203ENST00000479004 THEMISQ8N1K5 641 aaPredicted RBP31.52■■■□□ 2.64
TRIM8-203ENST00000479004 POLR1AO95602 1720 aaPredicted RBP31.52■■■□□ 2.64
TRIM8-203ENST00000479004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.51■■■□□ 2.63
TRIM8-203ENST00000479004 ARHGAP31Q2M1Z3 1444 aa31.5■■■□□ 2.63
TRIM8-203ENST00000479004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.49■■■□□ 2.63
TRIM8-203ENST00000479004 NEURL4Q96JN8 1562 aa31.47■■■□□ 2.63
TRIM8-203ENST00000479004 KANK1Q14678 1352 aa31.47■■■□□ 2.63
TRIM8-203ENST00000479004 ZNF335Q9H4Z2 1342 aaPredicted RBP31.47■■■□□ 2.63
TRIM8-203ENST00000479004 ANKLE2Q86XL3 938 aa31.45■■■□□ 2.63
TRIM8-203ENST00000479004 IQSEC2Q5JU85 1478 aa31.45■■■□□ 2.62
TRIM8-203ENST00000479004 VWDEQ8N2E2 1590 aa31.44■■■□□ 2.62
TRIM8-203ENST00000479004 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
TRIM8-203ENST00000479004 ANKRD50Q9ULJ7 1429 aa31.4■■■□□ 2.62
TRIM8-203ENST00000479004 UBR1Q8IWV7 1749 aa31.38■■■□□ 2.61
TRIM8-203ENST00000479004 PPARGC1BQ86YN6 1023 aaKnown RBP31.38■■■□□ 2.61
TRIM8-203ENST00000479004 MED14O60244 1454 aa31.38■■■□□ 2.61
TRIM8-203ENST00000479004 NPHP4O75161 1426 aaPredicted RBP31.34■■■□□ 2.61
TRIM8-203ENST00000479004 ROCK1Q13464 1354 aa31.31■■■□□ 2.6
TRIM8-203ENST00000479004 EFCAB6Q5THR3 1501 aa31.31■■■□□ 2.6
TRIM8-203ENST00000479004 IQGAP1P46940 1657 aa31.29■■■□□ 2.6
TRIM8-203ENST00000479004 PIK3C2BO00750 1634 aa31.28■■■□□ 2.6
TRIM8-203ENST00000479004 SLIT1O75093 1534 aa31.26■■■□□ 2.59
TRIM8-203ENST00000479004 ARHGAP23Q9P227 1491 aa31.26■■■□□ 2.59
TRIM8-203ENST00000479004 NOS1P29475 1434 aa31.25■■■□□ 2.59
TRIM8-203ENST00000479004 SYNMO15061 1565 aa31.25■■■□□ 2.59
TRIM8-203ENST00000479004 CPS1P31327 1500 aa31.24■■■□□ 2.59
TRIM8-203ENST00000479004 UNC13BO14795 1591 aa31.24■■■□□ 2.59
TRIM8-203ENST00000479004 IDI1Q13907 227 aa31.23■■■□□ 2.59
TRIM8-203ENST00000479004 KDM5AP29375 1690 aaKnown RBP31.22■■■□□ 2.59
TRIM8-203ENST00000479004 SCAF11Q99590 1463 aaKnown RBP31.22■■■□□ 2.59
TRIM8-203ENST00000479004 ITGAEP38570 1179 aa31.22■■■□□ 2.59
TRIM8-203ENST00000479004 LTKP29376 864 aa31.21■■■□□ 2.59
TRIM8-203ENST00000479004 TET3O43151 1660 aa31.21■■■□□ 2.59
TRIM8-203ENST00000479004 RPRD2Q5VT52 1461 aaKnown RBP31.21■■■□□ 2.59
TRIM8-203ENST00000479004 TXNDC2Q86VQ3 553 aa31.2■■■□□ 2.59
TRIM8-203ENST00000479004 STAG3Q9UJ98 1225 aa31.19■■■□□ 2.58
TRIM8-203ENST00000479004 UBAP1LF5GYI3 381 aa31.17■■■□□ 2.58
TRIM8-203ENST00000479004 TMEM2Q9UHN6 1383 aa31.17■■■□□ 2.58
TRIM8-203ENST00000479004 GCC2Q8IWJ2 1684 aa31.16■■■□□ 2.58
TRIM8-203ENST00000479004 SLC52A1Q9NWF4 448 aa31.16■■■□□ 2.58
TRIM8-203ENST00000479004 EID1Q9Y6B2 187 aa31.15■■■□□ 2.58
TRIM8-203ENST00000479004 RRBP1Q9P2E9 1410 aaKnown RBP31.15■■■□□ 2.58
TRIM8-203ENST00000479004 STRCP1A6NGW2 1772 aa31.12■■■□□ 2.57
TRIM8-203ENST00000479004 IQGAP3Q86VI3 1631 aa31.12■■■□□ 2.57
TRIM8-203ENST00000479004 ADGRB3O60242 1522 aa31.11■■■□□ 2.57
TRIM8-203ENST00000479004 E9PCH4 1651 aa31.08■■■□□ 2.57
TRIM8-203ENST00000479004 NUP155O75694 1391 aa31.05■■■□□ 2.56
TRIM8-203ENST00000479004 LRRC7Q96NW7 1537 aa31.03■■■□□ 2.56
TRIM8-203ENST00000479004 TOM1O60784 492 aa31.02■■■□□ 2.56
TRIM8-203ENST00000479004 MYO5BQ9ULV0 1848 aa31.02■■■□□ 2.56
TRIM8-203ENST00000479004 TMEM131LA2VDJ0 1609 aa30.99■■■□□ 2.55
TRIM8-203ENST00000479004 ZFYVE9O95405 1425 aa30.95■■■□□ 2.54
TRIM8-203ENST00000479004 NAIPQ13075 1403 aa30.93■■■□□ 2.54
TRIM8-203ENST00000479004 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
TRIM8-203ENST00000479004 ALKQ9UM73 1620 aa30.93■■■□□ 2.54
TRIM8-203ENST00000479004 RIMS2Q9UQ26 1411 aa30.91■■■□□ 2.54
TRIM8-203ENST00000479004 SLC26A8Q96RN1 970 aa30.91■■■□□ 2.54
TRIM8-203ENST00000479004 SCAF1Q9H7N4 1312 aaKnown RBP30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms