RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MED14O60244 1454 aa20.79■□□□□ 0.92
HDAC8-217ENST00000478743 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
HDAC8-217ENST00000478743 TNRQ92752 1358 aa20.77■□□□□ 0.92
HDAC8-217ENST00000478743 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
HDAC8-217ENST00000478743 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
HDAC8-217ENST00000478743 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
HDAC8-217ENST00000478743 HNRNPMP52272 730 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC8-217ENST00000478743 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
HDAC8-217ENST00000478743 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
HDAC8-217ENST00000478743 PZPP20742 1482 aa20.7■□□□□ 0.9
HDAC8-217ENST00000478743 ANKLE2Q86XL3 938 aa20.7■□□□□ 0.9
HDAC8-217ENST00000478743 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
HDAC8-217ENST00000478743 EEA1Q15075 1411 aa20.67■□□□□ 0.9
HDAC8-217ENST00000478743 GPATCH8Q9UKJ3 1502 aaKnown RBP20.67■□□□□ 0.9
HDAC8-217ENST00000478743 KDM5DQ9BY66 1539 aa20.65■□□□□ 0.9
HDAC8-217ENST00000478743 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
HDAC8-217ENST00000478743 FAM135AQ9P2D6 1515 aa20.63■□□□□ 0.89
HDAC8-217ENST00000478743 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
HDAC8-217ENST00000478743 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
HDAC8-217ENST00000478743 CCDC18Q5T9S5 1454 aa20.61■□□□□ 0.89
HDAC8-217ENST00000478743 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
HDAC8-217ENST00000478743 KIAA1107Q9UPP5 1409 aa20.6■□□□□ 0.89
HDAC8-217ENST00000478743 THEMISQ8N1K5 641 aaPredicted RBP20.58■□□□□ 0.89
HDAC8-217ENST00000478743 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
HDAC8-217ENST00000478743 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
HDAC8-217ENST00000478743 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
HDAC8-217ENST00000478743 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
HDAC8-217ENST00000478743 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
HDAC8-217ENST00000478743 LRP6O75581 1613 aa20.53■□□□□ 0.88
HDAC8-217ENST00000478743 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
HDAC8-217ENST00000478743 PHLPP1O60346 1717 aa20.52■□□□□ 0.88
HDAC8-217ENST00000478743 MBD5Q9P267 1494 aa20.51■□□□□ 0.87
HDAC8-217ENST00000478743 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
HDAC8-217ENST00000478743 ZNF644Q9H582 1327 aaPredicted RBP20.51■□□□□ 0.87
HDAC8-217ENST00000478743 KIF3BO15066 747 aa20.49■□□□□ 0.87
HDAC8-217ENST00000478743 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
HDAC8-217ENST00000478743 UBTFP17480 764 aaKnown RBP20.48■□□□□ 0.87
HDAC8-217ENST00000478743 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
HDAC8-217ENST00000478743 NCOA2Q15596 1464 aa20.48■□□□□ 0.87
HDAC8-217ENST00000478743 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
HDAC8-217ENST00000478743 TIAM1Q13009 1591 aa20.46■□□□□ 0.87
HDAC8-217ENST00000478743 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
HDAC8-217ENST00000478743 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
HDAC8-217ENST00000478743 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.86
HDAC8-217ENST00000478743 LTKP29376 864 aa20.44■□□□□ 0.86
HDAC8-217ENST00000478743 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
HDAC8-217ENST00000478743 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
HDAC8-217ENST00000478743 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
HDAC8-217ENST00000478743 ABCC3O15438 1527 aa20.43■□□□□ 0.86
HDAC8-217ENST00000478743 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
HDAC8-217ENST00000478743 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
HDAC8-217ENST00000478743 CFAP65Q6ZU64 1925 aaKnown RBP20.42■□□□□ 0.86
HDAC8-217ENST00000478743 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
HDAC8-217ENST00000478743 SLIT1O75093 1534 aa20.41■□□□□ 0.86
HDAC8-217ENST00000478743 CEP152O94986 1710 aa20.4■□□□□ 0.86
HDAC8-217ENST00000478743 JCADQ9P266 1359 aa20.39■□□□□ 0.85
HDAC8-217ENST00000478743 MROH1Q8NDA8 1641 aa20.38■□□□□ 0.85
HDAC8-217ENST00000478743 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
HDAC8-217ENST00000478743 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
HDAC8-217ENST00000478743 CCDC141Q6ZP82 1450 aa20.33■□□□□ 0.85
HDAC8-217ENST00000478743 PIK3C2BO00750 1634 aa20.32■□□□□ 0.84
HDAC8-217ENST00000478743 TXNDC2Q86VQ3 553 aa20.32■□□□□ 0.84
HDAC8-217ENST00000478743 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
HDAC8-217ENST00000478743 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-217ENST00000478743 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
HDAC8-217ENST00000478743 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
HDAC8-217ENST00000478743 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
HDAC8-217ENST00000478743 ZNF772Q68DY9 489 aaPredicted RBP20.28■□□□□ 0.84
HDAC8-217ENST00000478743 CAMSAP2Q08AD1 1489 aa20.28■□□□□ 0.84
HDAC8-217ENST00000478743 TET3O43151 1660 aa20.28■□□□□ 0.84
HDAC8-217ENST00000478743 RGS12O14924 1447 aa20.27■□□□□ 0.84
HDAC8-217ENST00000478743 KDM5AP29375 1690 aaKnown RBP20.27■□□□□ 0.84
HDAC8-217ENST00000478743 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
HDAC8-217ENST00000478743 RXRBP28702 533 aa20.25■□□□□ 0.83
HDAC8-217ENST00000478743 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-217ENST00000478743 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
HDAC8-217ENST00000478743 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
HDAC8-217ENST00000478743 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
HDAC8-217ENST00000478743 KCNA6P17658 529 aa20.23■□□□□ 0.83
HDAC8-217ENST00000478743 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
HDAC8-217ENST00000478743 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
HDAC8-217ENST00000478743 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
HDAC8-217ENST00000478743 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
HDAC8-217ENST00000478743 SLC26A8Q96RN1 970 aa20.22■□□□□ 0.83
HDAC8-217ENST00000478743 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
HDAC8-217ENST00000478743 MSH6P52701 1360 aa20.21■□□□□ 0.83
HDAC8-217ENST00000478743 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
HDAC8-217ENST00000478743 EHBP1L1Q8N3D4 1523 aa20.21■□□□□ 0.83
HDAC8-217ENST00000478743 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
HDAC8-217ENST00000478743 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
HDAC8-217ENST00000478743 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
HDAC8-217ENST00000478743 AFF2P51816 1311 aa20.16■□□□□ 0.82
HDAC8-217ENST00000478743 EFCAB6Q5THR3 1501 aa20.16■□□□□ 0.82
HDAC8-217ENST00000478743 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
HDAC8-217ENST00000478743 CHD2O14647 1828 aaKnown RBP20.15■□□□□ 0.82
HDAC8-217ENST00000478743 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-217ENST00000478743 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-217ENST00000478743 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-217ENST00000478743 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
HDAC8-217ENST00000478743 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms