RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.62■■□□□ 1.37
USP11-207ENST00000478596 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
USP11-207ENST00000478596 THEMISQ8N1K5 641 aaPredicted RBP23.61■■□□□ 1.37
USP11-207ENST00000478596 RNF17Q9BXT8 1623 aaKnown RBP23.61■■□□□ 1.37
USP11-207ENST00000478596 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
USP11-207ENST00000478596 PLEKHH2Q8IVE3 1493 aa23.59■■□□□ 1.37
USP11-207ENST00000478596 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
USP11-207ENST00000478596 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
USP11-207ENST00000478596 POTEAQ6S8J7 498 aa23.58■■□□□ 1.37
USP11-207ENST00000478596 PZPP20742 1482 aa23.56■■□□□ 1.36
USP11-207ENST00000478596 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
USP11-207ENST00000478596 SYNMO15061 1565 aa23.56■■□□□ 1.36
USP11-207ENST00000478596 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
USP11-207ENST00000478596 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
USP11-207ENST00000478596 ADGBQ8N7X0 1667 aa23.54■■□□□ 1.36
USP11-207ENST00000478596 FAM135AQ9P2D6 1515 aa23.53■■□□□ 1.36
USP11-207ENST00000478596 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
USP11-207ENST00000478596 MIA2Q96PC5 1412 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 IQGAP1P46940 1657 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 STRCP1A6NGW2 1772 aa23.51■■□□□ 1.35
USP11-207ENST00000478596 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
USP11-207ENST00000478596 DHX29Q7Z478 1369 aaKnown RBP23.49■■□□□ 1.35
USP11-207ENST00000478596 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
USP11-207ENST00000478596 RTEL1-TNFRSF6BF6WH68 1400 aa23.45■■□□□ 1.34
USP11-207ENST00000478596 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
USP11-207ENST00000478596 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
USP11-207ENST00000478596 KIF3BO15066 747 aa23.41■■□□□ 1.34
USP11-207ENST00000478596 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
USP11-207ENST00000478596 MBD5Q9P267 1494 aa23.4■■□□□ 1.34
USP11-207ENST00000478596 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
USP11-207ENST00000478596 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
USP11-207ENST00000478596 ZC3H13Q5T200 1668 aaKnown RBP23.36■■□□□ 1.33
USP11-207ENST00000478596 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
USP11-207ENST00000478596 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.33
USP11-207ENST00000478596 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
USP11-207ENST00000478596 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
USP11-207ENST00000478596 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
USP11-207ENST00000478596 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 LTKP29376 864 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
USP11-207ENST00000478596 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
USP11-207ENST00000478596 TMEM94Q12767 1356 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 SLIT1O75093 1534 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 TIAM1Q13009 1591 aa23.22■■□□□ 1.31
USP11-207ENST00000478596 TXNDC2Q86VQ3 553 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 JCADQ9P266 1359 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 NCOA2Q15596 1464 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
USP11-207ENST00000478596 UBR1Q8IWV7 1749 aa23.2■■□□□ 1.3
USP11-207ENST00000478596 ABCC3O15438 1527 aa23.2■■□□□ 1.3
USP11-207ENST00000478596 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
USP11-207ENST00000478596 MAP3K1Q13233 1512 aa23.16■■□□□ 1.3
USP11-207ENST00000478596 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
USP11-207ENST00000478596 EID1Q9Y6B2 187 aa23.15■■□□□ 1.3
USP11-207ENST00000478596 KCNA6P17658 529 aa23.13■■□□□ 1.29
USP11-207ENST00000478596 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
USP11-207ENST00000478596 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
USP11-207ENST00000478596 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
USP11-207ENST00000478596 PROSER2Q86WR7 435 aaPredicted RBP23.09■■□□□ 1.29
USP11-207ENST00000478596 PRDM15P57071 1507 aaPredicted RBP23.08■■□□□ 1.29
USP11-207ENST00000478596 LRP6O75581 1613 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 PHLPP1O60346 1717 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 SLAIN2Q9P270 581 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 CAMSAP2Q08AD1 1489 aa23.08■■□□□ 1.29
USP11-207ENST00000478596 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
USP11-207ENST00000478596 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
USP11-207ENST00000478596 FGD6Q6ZV73 1430 aa23.06■■□□□ 1.28
USP11-207ENST00000478596 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
USP11-207ENST00000478596 MSH6P52701 1360 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
USP11-207ENST00000478596 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
USP11-207ENST00000478596 RXRBP28702 533 aa23.04■■□□□ 1.28
USP11-207ENST00000478596 ARHGEF5Q12774 1597 aa23.04■■□□□ 1.28
USP11-207ENST00000478596 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
USP11-207ENST00000478596 MEX3CQ5U5Q3 659 aaKnown RBP23.03■■□□□ 1.28
USP11-207ENST00000478596 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
USP11-207ENST00000478596 ARHGAP31Q2M1Z3 1444 aa23.02■■□□□ 1.28
USP11-207ENST00000478596 EIF2AK4Q9P2K8 1649 aaKnown RBP23.02■■□□□ 1.28
USP11-207ENST00000478596 TET3O43151 1660 aa23.01■■□□□ 1.27
USP11-207ENST00000478596 NWD1Q149M9 1564 aa23■■□□□ 1.27
USP11-207ENST00000478596 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
USP11-207ENST00000478596 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
USP11-207ENST00000478596 PIK3C2BO00750 1634 aa22.95■■□□□ 1.26
USP11-207ENST00000478596 CEP152O94986 1710 aa22.95■■□□□ 1.26
USP11-207ENST00000478596 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
USP11-207ENST00000478596 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
USP11-207ENST00000478596 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
USP11-207ENST00000478596 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
USP11-207ENST00000478596 SHPRHQ149N8 1683 aa22.91■■□□□ 1.26
USP11-207ENST00000478596 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
USP11-207ENST00000478596 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
USP11-207ENST00000478596 NCOA3Q9Y6Q9 1424 aa22.89■■□□□ 1.25
USP11-207ENST00000478596 IDI1Q13907 227 aa22.87■■□□□ 1.25
USP11-207ENST00000478596 RGS12O14924 1447 aa22.85■■□□□ 1.25
USP11-207ENST00000478596 DUOX2Q9NRD8 1548 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms