RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 WASHC2CQ9Y4E1 1318 aa29.66■■■□□ 2.34
EPHB4-205ENST00000478459 RRP7BPQ9NSQ0 103 aa29.65■■■□□ 2.34
EPHB4-205ENST00000478459 KDM5DQ9BY66 1539 aa29.64■■■□□ 2.34
EPHB4-205ENST00000478459 DNMT1P26358 1616 aaKnown RBP29.63■■■□□ 2.33
EPHB4-205ENST00000478459 FAM50AQ14320 339 aaKnown RBP29.62■■■□□ 2.33
EPHB4-205ENST00000478459 PPP6R1Q9UPN7 881 aa29.62■■■□□ 2.33
EPHB4-205ENST00000478459 DAPK1P53355 1430 aa29.62■■■□□ 2.33
EPHB4-205ENST00000478459 CAMSAP1Q5T5Y3 1602 aa29.61■■■□□ 2.33
EPHB4-205ENST00000478459 TCOF1Q13428 1488 aaKnown RBP29.6■■■□□ 2.33
EPHB4-205ENST00000478459 CEP152O94986 1710 aa29.58■■■□□ 2.33
EPHB4-205ENST00000478459 RNF17Q9BXT8 1623 aaKnown RBP29.58■■■□□ 2.33
EPHB4-205ENST00000478459 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
EPHB4-205ENST00000478459 CEP170BQ9Y4F5 1589 aaPredicted RBP29.58■■■□□ 2.33
EPHB4-205ENST00000478459 CFAP65Q6ZU64 1925 aaKnown RBP29.57■■■□□ 2.32
EPHB4-205ENST00000478459 DUOX2Q9NRD8 1548 aa29.56■■■□□ 2.32
EPHB4-205ENST00000478459 NCKAP5LQ9HCH0 1330 aa29.56■■■□□ 2.32
EPHB4-205ENST00000478459 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
EPHB4-205ENST00000478459 EIF2AK4Q9P2K8 1649 aaKnown RBP29.56■■■□□ 2.32
EPHB4-205ENST00000478459 SHANK2Q9UPX8 1470 aa29.55■■■□□ 2.32
EPHB4-205ENST00000478459 MROH1Q8NDA8 1641 aa29.54■■■□□ 2.32
EPHB4-205ENST00000478459 NCOA1Q15788 1441 aa29.54■■■□□ 2.32
EPHB4-205ENST00000478459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.53■■■□□ 2.32
EPHB4-205ENST00000478459 ABCC3O15438 1527 aa29.52■■■□□ 2.32
EPHB4-205ENST00000478459 PZPP20742 1482 aa29.52■■■□□ 2.32
EPHB4-205ENST00000478459 TNRQ92752 1358 aa29.52■■■□□ 2.32
EPHB4-205ENST00000478459 DMRT2Q9Y5R5 561 aa29.51■■■□□ 2.31
EPHB4-205ENST00000478459 FBXO41Q8TF61 875 aa29.49■■■□□ 2.31
EPHB4-205ENST00000478459 CERKQ8TCT0 537 aa29.48■■■□□ 2.31
EPHB4-205ENST00000478459 ZC3H13Q5T200 1668 aaKnown RBP29.47■■■□□ 2.31
EPHB4-205ENST00000478459 FAM135AQ9P2D6 1515 aa29.46■■■□□ 2.31
EPHB4-205ENST00000478459 A2ML1A8K2U0 1454 aa29.46■■■□□ 2.31
EPHB4-205ENST00000478459 ANKRD30AQ9BXX3 1397 aa29.44■■■□□ 2.3
EPHB4-205ENST00000478459 PTPRTO14522 1441 aa29.43■■■□□ 2.3
EPHB4-205ENST00000478459 ERBINQ96RT1 1412 aa29.42■■■□□ 2.3
EPHB4-205ENST00000478459 ITGAEP38570 1179 aa29.4■■■□□ 2.3
EPHB4-205ENST00000478459 PRDM15P57071 1507 aaPredicted RBP29.38■■■□□ 2.29
EPHB4-205ENST00000478459 ERVK-7P63135 1459 aa29.36■■■□□ 2.29
EPHB4-205ENST00000478459 PLA2R1Q13018 1463 aa29.36■■■□□ 2.29
EPHB4-205ENST00000478459 DEPDC5O75140 1603 aa29.35■■■□□ 2.29
EPHB4-205ENST00000478459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.35■■■□□ 2.29
EPHB4-205ENST00000478459 POLR1AO95602 1720 aaPredicted RBP29.34■■■□□ 2.29
EPHB4-205ENST00000478459 SPATA31D1Q6ZQQ2 1576 aa29.33■■■□□ 2.29
EPHB4-205ENST00000478459 UGGT1Q9NYU2 1555 aa29.32■■■□□ 2.28
EPHB4-205ENST00000478459 ADGRL2O95490 1459 aa29.32■■■□□ 2.28
EPHB4-205ENST00000478459 KANK1Q14678 1352 aa29.31■■■□□ 2.28
EPHB4-205ENST00000478459 ZNF335Q9H4Z2 1342 aaPredicted RBP29.31■■■□□ 2.28
EPHB4-205ENST00000478459 PKD2Q13563 968 aa29.31■■■□□ 2.28
EPHB4-205ENST00000478459 NLRP1Q9C000 1473 aa29.3■■■□□ 2.28
EPHB4-205ENST00000478459 LTBP4Q8N2S1 1624 aa29.29■■■□□ 2.28
EPHB4-205ENST00000478459 NEURL4Q96JN8 1562 aa29.26■■■□□ 2.28
EPHB4-205ENST00000478459 THEMISQ8N1K5 641 aaPredicted RBP29.26■■■□□ 2.27
EPHB4-205ENST00000478459 ANKRD50Q9ULJ7 1429 aa29.25■■■□□ 2.27
EPHB4-205ENST00000478459 ANKLE2Q86XL3 938 aa29.22■■■□□ 2.27
EPHB4-205ENST00000478459 UBR1Q8IWV7 1749 aa29.22■■■□□ 2.27
EPHB4-205ENST00000478459 VWDEQ8N2E2 1590 aa29.21■■■□□ 2.27
EPHB4-205ENST00000478459 ARHGAP31Q2M1Z3 1444 aa29.19■■■□□ 2.26
EPHB4-205ENST00000478459 PIK3C2BO00750 1634 aa29.18■■■□□ 2.26
EPHB4-205ENST00000478459 EFCAB6Q5THR3 1501 aa29.15■■■□□ 2.26
EPHB4-205ENST00000478459 LMTK2Q8IWU2 1503 aa29.15■■■□□ 2.26
EPHB4-205ENST00000478459 NPHP4O75161 1426 aaPredicted RBP29.13■■■□□ 2.25
EPHB4-205ENST00000478459 SYNMO15061 1565 aa29.13■■■□□ 2.25
EPHB4-205ENST00000478459 STAG3Q9UJ98 1225 aa29.12■■■□□ 2.25
EPHB4-205ENST00000478459 IQGAP1P46940 1657 aa29.12■■■□□ 2.25
EPHB4-205ENST00000478459 UNC13BO14795 1591 aa29.09■■■□□ 2.25
EPHB4-205ENST00000478459 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
EPHB4-205ENST00000478459 IDI1Q13907 227 aa29.08■■■□□ 2.25
EPHB4-205ENST00000478459 ROCK1Q13464 1354 aa29.08■■■□□ 2.25
EPHB4-205ENST00000478459 TET3O43151 1660 aa29.07■■■□□ 2.24
EPHB4-205ENST00000478459 LTKP29376 864 aa29.07■■■□□ 2.24
EPHB4-205ENST00000478459 TXNDC2Q86VQ3 553 aa29.05■■■□□ 2.24
EPHB4-205ENST00000478459 GCC2Q8IWJ2 1684 aa29.05■■■□□ 2.24
EPHB4-205ENST00000478459 MED14O60244 1454 aa29.04■■■□□ 2.24
EPHB4-205ENST00000478459 NOS1P29475 1434 aa29.03■■■□□ 2.24
EPHB4-205ENST00000478459 MYO5BQ9ULV0 1848 aa29.02■■■□□ 2.24
EPHB4-205ENST00000478459 UBAP1LF5GYI3 381 aa29.02■■■□□ 2.24
EPHB4-205ENST00000478459 SCAF11Q99590 1463 aaKnown RBP29.02■■■□□ 2.24
EPHB4-205ENST00000478459 E9PCH4 1651 aa29.02■■■□□ 2.24
EPHB4-205ENST00000478459 RRBP1Q9P2E9 1410 aaKnown RBP29.01■■■□□ 2.23
EPHB4-205ENST00000478459 STRCP1A6NGW2 1772 aa29.01■■■□□ 2.23
EPHB4-205ENST00000478459 NUP155O75694 1391 aa29■■■□□ 2.23
EPHB4-205ENST00000478459 ARHGAP23Q9P227 1491 aa28.99■■■□□ 2.23
EPHB4-205ENST00000478459 SLIT1O75093 1534 aa28.99■■■□□ 2.23
EPHB4-205ENST00000478459 IQGAP3Q86VI3 1631 aa28.98■■■□□ 2.23
EPHB4-205ENST00000478459 EID1Q9Y6B2 187 aa28.98■■■□□ 2.23
EPHB4-205ENST00000478459 IQSEC2Q5JU85 1478 aa28.97■■■□□ 2.23
EPHB4-205ENST00000478459 ADGRB3O60242 1522 aa28.96■■■□□ 2.23
EPHB4-205ENST00000478459 CHGAP10645 457 aaKnown RBP28.96■■■□□ 2.23
EPHB4-205ENST00000478459 TMEM2Q9UHN6 1383 aa28.96■■■□□ 2.23
EPHB4-205ENST00000478459 CPS1P31327 1500 aa28.94■■■□□ 2.22
EPHB4-205ENST00000478459 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
EPHB4-205ENST00000478459 RPRD2Q5VT52 1461 aaKnown RBP28.93■■■□□ 2.22
EPHB4-205ENST00000478459 KDM5AP29375 1690 aaKnown RBP28.91■■■□□ 2.22
EPHB4-205ENST00000478459 SLC52A1Q9NWF4 448 aa28.91■■■□□ 2.22
EPHB4-205ENST00000478459 PIP4K2BP78356 416 aa28.9■■■□□ 2.22
EPHB4-205ENST00000478459 BCANQ96GW7 911 aa28.9■■■□□ 2.22
EPHB4-205ENST00000478459 SLC26A8Q96RN1 970 aa28.88■■■□□ 2.21
EPHB4-205ENST00000478459 NUTM2DQ5VT03 806 aaPredicted RBP28.87■■■□□ 2.21
EPHB4-205ENST00000478459 NAIPQ13075 1403 aa28.86■■■□□ 2.21
EPHB4-205ENST00000478459 TMEM131LA2VDJ0 1609 aa28.85■■■□□ 2.21
EPHB4-205ENST00000478459 LRRC7Q96NW7 1537 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms