RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	KANK4	Q5T7N3	995 aa	Predicted RBP	13.86	□□□□□ -0.19
MMS19-215	ENST00000478452	CCDC141	Q6ZP82	1450 aa		13.86	□□□□□ -0.19
MMS19-215	ENST00000478452	SOCS7	O14512	581 aa		13.85	□□□□□ -0.19
MMS19-215	ENST00000478452	A2ML1	A8K2U0	1454 aa		13.85	□□□□□ -0.19
MMS19-215	ENST00000478452	TCOF1	Q13428	1488 aa	Known RBP	13.85	□□□□□ -0.19
MMS19-215	ENST00000478452	CLTC	Q00610	1675 aa	Known RBP	13.85	□□□□□ -0.19
MMS19-215	ENST00000478452	MIA2	Q96PC5	1412 aa		13.84	□□□□□ -0.19
MMS19-215	ENST00000478452	TOM1	O60784	492 aa		13.84	□□□□□ -0.19
MMS19-215	ENST00000478452	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
MMS19-215	ENST00000478452	CAMSAP2	Q08AD1	1489 aa		13.82	□□□□□ -0.2
MMS19-215	ENST00000478452	PIP4K2B	P78356	416 aa		13.82	□□□□□ -0.2
MMS19-215	ENST00000478452	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.82	□□□□□ -0.2
MMS19-215	ENST00000478452	SCAF1	Q9H7N4	1312 aa	Known RBP	13.82	□□□□□ -0.2
MMS19-215	ENST00000478452	APLP2	Q06481	763 aa		13.81	□□□□□ -0.2
MMS19-215	ENST00000478452	PZP	P20742	1482 aa		13.8	□□□□□ -0.2
MMS19-215	ENST00000478452	ADGB	Q8N7X0	1667 aa		13.8	□□□□□ -0.2
MMS19-215	ENST00000478452	VPS8	Q8N3P4	1428 aa		13.8	□□□□□ -0.2
MMS19-215	ENST00000478452	LRRC9	Q6ZRR7	1453 aa		13.8	□□□□□ -0.2
MMS19-215	ENST00000478452	MYO3A	Q8NEV4	1616 aa		13.78	□□□□□ -0.2
MMS19-215	ENST00000478452	KDM5D	Q9BY66	1539 aa		13.77	□□□□□ -0.21
MMS19-215	ENST00000478452	RRP7BP	Q9NSQ0	103 aa		13.77	□□□□□ -0.21
MMS19-215	ENST00000478452	DNMT1	P26358	1616 aa	Known RBP	13.76	□□□□□ -0.21
MMS19-215	ENST00000478452	NLRP1	Q9C000	1473 aa		13.76	□□□□□ -0.21
MMS19-215	ENST00000478452	HSPA1L	P34931	641 aa		13.76	□□□□□ -0.21
MMS19-215	ENST00000478452	FAM135A	Q9P2D6	1515 aa		13.75	□□□□□ -0.21
MMS19-215	ENST00000478452	SHANK2	Q9UPX8	1470 aa		13.75	□□□□□ -0.21
MMS19-215	ENST00000478452	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
MMS19-215	ENST00000478452	NPHP4	O75161	1426 aa	Predicted RBP	13.74	□□□□□ -0.21
MMS19-215	ENST00000478452	MYOM3	Q5VTT5	1437 aa		13.74	□□□□□ -0.21
MMS19-215	ENST00000478452	ARHGEF5	Q12774	1597 aa		13.74	□□□□□ -0.21
MMS19-215	ENST00000478452	ZNF142	P52746	1687 aa	Predicted RBP	13.73	□□□□□ -0.21
MMS19-215	ENST00000478452	TXNDC2	Q86VQ3	553 aa		13.73	□□□□□ -0.21
MMS19-215	ENST00000478452	UGGT1	Q9NYU2	1555 aa		13.72	□□□□□ -0.21
MMS19-215	ENST00000478452	CPS1	P31327	1500 aa		13.71	□□□□□ -0.21
MMS19-215	ENST00000478452	MAP3K1	Q13233	1512 aa		13.71	□□□□□ -0.21
MMS19-215	ENST00000478452	STAG3	Q9UJ98	1225 aa		13.71	□□□□□ -0.21
MMS19-215	ENST00000478452	EID1	Q9Y6B2	187 aa		13.71	□□□□□ -0.21
MMS19-215	ENST00000478452	MED14	O60244	1454 aa		13.7	□□□□□ -0.22
MMS19-215	ENST00000478452	CHIC2	Q9UKJ5	165 aa		13.7	□□□□□ -0.22
MMS19-215	ENST00000478452	LTK	P29376	864 aa		13.69	□□□□□ -0.22
MMS19-215	ENST00000478452	KIF15	Q9NS87	1388 aa		13.69	□□□□□ -0.22
MMS19-215	ENST00000478452	SPATA31D1	Q6ZQQ2	1576 aa		13.68	□□□□□ -0.22
MMS19-215	ENST00000478452	ABCC3	O15438	1527 aa		13.68	□□□□□ -0.22
MMS19-215	ENST00000478452	ABCC5	O15440	1437 aa		13.67	□□□□□ -0.22
MMS19-215	ENST00000478452	SENP3	Q9H4L4	574 aa	Predicted RBP	13.67	□□□□□ -0.22
MMS19-215	ENST00000478452	KANK1	Q14678	1352 aa		13.67	□□□□□ -0.22
MMS19-215	ENST00000478452	ERVK-7	P63135	1459 aa		13.66	□□□□□ -0.22
MMS19-215	ENST00000478452	NEURL4	Q96JN8	1562 aa		13.66	□□□□□ -0.22
MMS19-215	ENST00000478452	MAST1	Q9Y2H9	1570 aa		13.66	□□□□□ -0.22
MMS19-215	ENST00000478452	DUOX2	Q9NRD8	1548 aa		13.65	□□□□□ -0.22
MMS19-215	ENST00000478452	IDI1	Q13907	227 aa		13.65	□□□□□ -0.22
MMS19-215	ENST00000478452	ARHGAP31	Q2M1Z3	1444 aa		13.64	□□□□□ -0.23
MMS19-215	ENST00000478452	ANKRD30A	Q9BXX3	1397 aa		13.63	□□□□□ -0.23
MMS19-215	ENST00000478452	PHF23	Q9BUL5	403 aa	Predicted RBP	13.63	□□□□□ -0.23
MMS19-215	ENST00000478452	VWDE	Q8N2E2	1590 aa		13.62	□□□□□ -0.23
MMS19-215	ENST00000478452	DEPDC5	O75140	1603 aa		13.62	□□□□□ -0.23
MMS19-215	ENST00000478452	ERBIN	Q96RT1	1412 aa		13.62	□□□□□ -0.23
MMS19-215	ENST00000478452	RNF17	Q9BXT8	1623 aa	Known RBP	13.61	□□□□□ -0.23
MMS19-215	ENST00000478452	FAM50A	Q14320	339 aa	Known RBP	13.61	□□□□□ -0.23
MMS19-215	ENST00000478452	DAPK1	P53355	1430 aa		13.61	□□□□□ -0.23
MMS19-215	ENST00000478452	SCAF11	Q99590	1463 aa	Known RBP	13.61	□□□□□ -0.23
MMS19-215	ENST00000478452	TMEM2	Q9UHN6	1383 aa		13.6	□□□□□ -0.23
MMS19-215	ENST00000478452	LRRC7	Q96NW7	1537 aa		13.6	□□□□□ -0.23
MMS19-215	ENST00000478452	BCAN	Q96GW7	911 aa		13.6	□□□□□ -0.23
MMS19-215	ENST00000478452	SLC26A8	Q96RN1	970 aa		13.6	□□□□□ -0.23
MMS19-215	ENST00000478452	SLC52A1	Q9NWF4	448 aa		13.6	□□□□□ -0.23
MMS19-215	ENST00000478452	FGD6	Q6ZV73	1430 aa		13.59	□□□□□ -0.23
MMS19-215	ENST00000478452	KCNA6	P17658	529 aa		13.59	□□□□□ -0.23
MMS19-215	ENST00000478452	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.59	□□□□□ -0.23
MMS19-215	ENST00000478452	HDGF	P51858	240 aa	Known RBP	13.58	□□□□□ -0.24
MMS19-215	ENST00000478452	PROSER2	Q86WR7	435 aa	Predicted RBP	13.58	□□□□□ -0.24
MMS19-215	ENST00000478452	POLR1A	O95602	1720 aa	Predicted RBP	13.58	□□□□□ -0.24
MMS19-215	ENST00000478452	MROH1	Q8NDA8	1641 aa		13.57	□□□□□ -0.24
MMS19-215	ENST00000478452	ARHGAP23	Q9P227	1491 aa		13.57	□□□□□ -0.24
MMS19-215	ENST00000478452	ZC3H13	Q5T200	1668 aa	Known RBP	13.56	□□□□□ -0.24
MMS19-215	ENST00000478452	SLIT1	O75093	1534 aa		13.56	□□□□□ -0.24
MMS19-215	ENST00000478452	PTPN23	Q9H3S7	1636 aa		13.55	□□□□□ -0.24
MMS19-215	ENST00000478452	RBM33	Q96EV2	1170 aa	Known RBP	13.55	□□□□□ -0.24
MMS19-215	ENST00000478452	IQGAP1	P46940	1657 aa		13.55	□□□□□ -0.24
MMS19-215	ENST00000478452	TMEM94	Q12767	1356 aa		13.53	□□□□□ -0.24
MMS19-215	ENST00000478452	PRDM15	P57071	1507 aa	Predicted RBP	13.53	□□□□□ -0.24
MMS19-215	ENST00000478452	ALK	Q9UM73	1620 aa		13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	MED1	Q15648	1581 aa	Predicted RBP	13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	LMTK2	Q8IWU2	1503 aa		13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	NOS1	P29475	1434 aa		13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	FAM135B	Q49AJ0	1406 aa		13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	ANKRD50	Q9ULJ7	1429 aa		13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	PPP1R15A	O75807	674 aa	Predicted RBP	13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	CHGA	P10645	457 aa	Known RBP	13.51	□□□□□ -0.25
MMS19-215	ENST00000478452	UBR1	Q8IWV7	1749 aa		13.5	□□□□□ -0.25
MMS19-215	ENST00000478452	SLAIN2	Q9P270	581 aa		13.5	□□□□□ -0.25
MMS19-215	ENST00000478452	CEP152	O94986	1710 aa		13.5	□□□□□ -0.25
MMS19-215	ENST00000478452	EFCAB6	Q5THR3	1501 aa		13.49	□□□□□ -0.25
MMS19-215	ENST00000478452	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
MMS19-215	ENST00000478452	RGS17	Q9UGC6	210 aa	Predicted RBP	13.49	□□□□□ -0.25
MMS19-215	ENST00000478452	TBX22	Q9Y458	520 aa		13.49	□□□□□ -0.25
MMS19-215	ENST00000478452	CFAP65	Q6ZU64	1925 aa	Known RBP	13.49	□□□□□ -0.25
MMS19-215	ENST00000478452	STRCP1	A6NGW2	1772 aa		13.47	□□□□□ -0.25
MMS19-215	ENST00000478452	ADGRL2	O95490	1459 aa		13.47	□□□□□ -0.25
MMS19-215	ENST00000478452	ITGAE	P38570	1179 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms