RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 ZNF142P52746 1687 aaPredicted RBP17.02■□□□□ 0.32
VANGL1-206ENST00000478369 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
VANGL1-206ENST00000478369 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
VANGL1-206ENST00000478369 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
VANGL1-206ENST00000478369 PLA2R1Q13018 1463 aa17■□□□□ 0.31
VANGL1-206ENST00000478369 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
VANGL1-206ENST00000478369 PZPP20742 1482 aa16.99■□□□□ 0.31
VANGL1-206ENST00000478369 PKD2Q13563 968 aa16.98■□□□□ 0.31
VANGL1-206ENST00000478369 EIF2AK4Q9P2K8 1649 aaKnown RBP16.97■□□□□ 0.31
VANGL1-206ENST00000478369 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
VANGL1-206ENST00000478369 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.31
VANGL1-206ENST00000478369 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.31
VANGL1-206ENST00000478369 TNRQ92752 1358 aa16.95■□□□□ 0.3
VANGL1-206ENST00000478369 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
VANGL1-206ENST00000478369 DUOX2Q9NRD8 1548 aa16.95■□□□□ 0.3
VANGL1-206ENST00000478369 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
VANGL1-206ENST00000478369 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
VANGL1-206ENST00000478369 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
VANGL1-206ENST00000478369 FBXO31Q5XUX0 539 aaPredicted RBP16.92■□□□□ 0.3
VANGL1-206ENST00000478369 ABCC5O15440 1437 aa16.92■□□□□ 0.3
VANGL1-206ENST00000478369 NCKAP5LQ9HCH0 1330 aa16.92■□□□□ 0.3
VANGL1-206ENST00000478369 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
VANGL1-206ENST00000478369 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 LTBP4Q8N2S1 1624 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 IQSEC2Q5JU85 1478 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 ABCC3O15438 1527 aa16.91■□□□□ 0.3
VANGL1-206ENST00000478369 DAPK1P53355 1430 aa16.9■□□□□ 0.3
VANGL1-206ENST00000478369 KIF15Q9NS87 1388 aa16.89■□□□□ 0.3
VANGL1-206ENST00000478369 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
VANGL1-206ENST00000478369 THEMISQ8N1K5 641 aaPredicted RBP16.87■□□□□ 0.29
VANGL1-206ENST00000478369 SPATA31D1Q6ZQQ2 1576 aa16.86■□□□□ 0.29
VANGL1-206ENST00000478369 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
VANGL1-206ENST00000478369 ANKRD30AQ9BXX3 1397 aa16.86■□□□□ 0.29
VANGL1-206ENST00000478369 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
VANGL1-206ENST00000478369 UGGT1Q9NYU2 1555 aa16.85■□□□□ 0.29
VANGL1-206ENST00000478369 ANKLE2Q86XL3 938 aa16.84■□□□□ 0.29
VANGL1-206ENST00000478369 ARHGAP31Q2M1Z3 1444 aa16.84■□□□□ 0.29
VANGL1-206ENST00000478369 ERVK-7P63135 1459 aa16.83■□□□□ 0.28
VANGL1-206ENST00000478369 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
VANGL1-206ENST00000478369 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
VANGL1-206ENST00000478369 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
VANGL1-206ENST00000478369 KANK1Q14678 1352 aa16.81■□□□□ 0.28
VANGL1-206ENST00000478369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
VANGL1-206ENST00000478369 CEP152O94986 1710 aa16.81■□□□□ 0.28
VANGL1-206ENST00000478369 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
VANGL1-206ENST00000478369 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
VANGL1-206ENST00000478369 MED14O60244 1454 aa16.8■□□□□ 0.28
VANGL1-206ENST00000478369 CHIC2Q9UKJ5 165 aa16.79■□□□□ 0.28
VANGL1-206ENST00000478369 LMTK2Q8IWU2 1503 aa16.77■□□□□ 0.28
VANGL1-206ENST00000478369 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
VANGL1-206ENST00000478369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
VANGL1-206ENST00000478369 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
VANGL1-206ENST00000478369 CPS1P31327 1500 aa16.75■□□□□ 0.27
VANGL1-206ENST00000478369 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
VANGL1-206ENST00000478369 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
VANGL1-206ENST00000478369 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
VANGL1-206ENST00000478369 ANKRD50Q9ULJ7 1429 aa16.71■□□□□ 0.27
VANGL1-206ENST00000478369 CFAP65Q6ZU64 1925 aaKnown RBP16.71■□□□□ 0.27
VANGL1-206ENST00000478369 SLIT1O75093 1534 aa16.7■□□□□ 0.26
VANGL1-206ENST00000478369 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
VANGL1-206ENST00000478369 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
VANGL1-206ENST00000478369 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
VANGL1-206ENST00000478369 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
VANGL1-206ENST00000478369 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
VANGL1-206ENST00000478369 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
VANGL1-206ENST00000478369 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
VANGL1-206ENST00000478369 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
VANGL1-206ENST00000478369 NOS1P29475 1434 aa16.67■□□□□ 0.26
VANGL1-206ENST00000478369 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
VANGL1-206ENST00000478369 PIK3C2BO00750 1634 aa16.66■□□□□ 0.26
VANGL1-206ENST00000478369 TOM1O60784 492 aa16.65■□□□□ 0.26
VANGL1-206ENST00000478369 IDI1Q13907 227 aa16.65■□□□□ 0.26
VANGL1-206ENST00000478369 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
VANGL1-206ENST00000478369 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
VANGL1-206ENST00000478369 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.26
VANGL1-206ENST00000478369 LTKP29376 864 aa16.64■□□□□ 0.25
VANGL1-206ENST00000478369 SYNMO15061 1565 aa16.63■□□□□ 0.25
VANGL1-206ENST00000478369 UNC13BO14795 1591 aa16.62■□□□□ 0.25
VANGL1-206ENST00000478369 TET3O43151 1660 aa16.62■□□□□ 0.25
VANGL1-206ENST00000478369 ADGRB3O60242 1522 aa16.6■□□□□ 0.25
VANGL1-206ENST00000478369 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
VANGL1-206ENST00000478369 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
VANGL1-206ENST00000478369 STRCP1A6NGW2 1772 aa16.57■□□□□ 0.24
VANGL1-206ENST00000478369 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
VANGL1-206ENST00000478369 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
VANGL1-206ENST00000478369 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
VANGL1-206ENST00000478369 ITGAEP38570 1179 aa16.54■□□□□ 0.24
VANGL1-206ENST00000478369 PIP4K2BP78356 416 aa16.54■□□□□ 0.24
VANGL1-206ENST00000478369 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
VANGL1-206ENST00000478369 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
VANGL1-206ENST00000478369 NUP155O75694 1391 aa16.53■□□□□ 0.24
VANGL1-206ENST00000478369 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
VANGL1-206ENST00000478369 E9PCH4 1651 aa16.52■□□□□ 0.23
VANGL1-206ENST00000478369 KCNA6P17658 529 aa16.51■□□□□ 0.23
VANGL1-206ENST00000478369 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
VANGL1-206ENST00000478369 ZFYVE9O95405 1425 aa16.51■□□□□ 0.23
VANGL1-206ENST00000478369 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
VANGL1-206ENST00000478369 HSPA1LP34931 641 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms