RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 NCLP19338 710 aaKnown RBP14.59□□□□□ -0.07
GFM1-207ENST00000478254 NUP155O75694 1391 aa14.58□□□□□ -0.08
GFM1-207ENST00000478254 FBLN2P98095 1184 aa14.57□□□□□ -0.08
GFM1-207ENST00000478254 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
GFM1-207ENST00000478254 KDM6BO15054 1643 aa14.57□□□□□ -0.08
GFM1-207ENST00000478254 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
GFM1-207ENST00000478254 TRAK2O60296 914 aa14.55□□□□□ -0.08
GFM1-207ENST00000478254 TPRNQ4KMQ1 711 aa14.55□□□□□ -0.08
GFM1-207ENST00000478254 RPRD2Q5VT52 1461 aaKnown RBP14.54□□□□□ -0.08
GFM1-207ENST00000478254 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
GFM1-207ENST00000478254 SPATA31E1Q6ZUB1 1445 aa14.54□□□□□ -0.08
GFM1-207ENST00000478254 DENND4BO75064 1496 aaPredicted RBP14.54□□□□□ -0.08
GFM1-207ENST00000478254 FAM13BQ9NYF5 915 aa14.53□□□□□ -0.08
GFM1-207ENST00000478254 TBC1D2Q9BYX2 928 aa14.53□□□□□ -0.08
GFM1-207ENST00000478254 KDM2BQ8NHM5 1336 aa14.52□□□□□ -0.09
GFM1-207ENST00000478254 TSPY4P0CV99 314 aa14.51□□□□□ -0.09
GFM1-207ENST00000478254 TSPY10P0CW01 314 aa14.51□□□□□ -0.09
GFM1-207ENST00000478254 DUSP27Q5VZP5 1158 aa14.51□□□□□ -0.09
GFM1-207ENST00000478254 MCM4P33991 863 aa14.51□□□□□ -0.09
GFM1-207ENST00000478254 ANP32BQ92688 251 aaKnown RBP14.51□□□□□ -0.09
GFM1-207ENST00000478254 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
GFM1-207ENST00000478254 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
GFM1-207ENST00000478254 ESPNB1AK53 854 aa14.5□□□□□ -0.09
GFM1-207ENST00000478254 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
GFM1-207ENST00000478254 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
GFM1-207ENST00000478254 TMF1P82094 1093 aa14.49□□□□□ -0.09
GFM1-207ENST00000478254 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
GFM1-207ENST00000478254 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
GFM1-207ENST00000478254 HSCBQ8IWL3 235 aa14.49□□□□□ -0.09
GFM1-207ENST00000478254 RRP9O43818 475 aaKnown RBP14.48□□□□□ -0.09
GFM1-207ENST00000478254 CFAP43Q8NDM7 1665 aa14.48□□□□□ -0.09
GFM1-207ENST00000478254 MIA2Q96PC5 1412 aa14.47□□□□□ -0.09
GFM1-207ENST00000478254 GRPEL1Q9HAV7 217 aa14.47□□□□□ -0.09
GFM1-207ENST00000478254 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
GFM1-207ENST00000478254 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.09
GFM1-207ENST00000478254 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
GFM1-207ENST00000478254 PLEKHH1Q9ULM0 1364 aa14.46□□□□□ -0.1
GFM1-207ENST00000478254 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.1
GFM1-207ENST00000478254 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
GFM1-207ENST00000478254 FTSJ3Q8IY81 847 aaKnown RBP14.45□□□□□ -0.1
GFM1-207ENST00000478254 TEX14Q8IWB6 1497 aa14.45□□□□□ -0.1
GFM1-207ENST00000478254 KIAA1211Q6ZU35 1233 aa14.45□□□□□ -0.1
GFM1-207ENST00000478254 CLCN1P35523 988 aa14.45□□□□□ -0.1
GFM1-207ENST00000478254 PPP2R1AP30153 589 aa14.44□□□□□ -0.1
GFM1-207ENST00000478254 MRE11P49959 708 aa14.44□□□□□ -0.1
GFM1-207ENST00000478254 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
GFM1-207ENST00000478254 MSNP26038 577 aaKnown RBP14.44□□□□□ -0.1
GFM1-207ENST00000478254 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
GFM1-207ENST00000478254 C22orf23Q9BZE7 217 aa14.43□□□□□ -0.1
GFM1-207ENST00000478254 R3HCC1Q9Y3T6 440 aaKnown RBP14.43□□□□□ -0.1
GFM1-207ENST00000478254 PRDM10Q9NQV6 1147 aa14.43□□□□□ -0.1
GFM1-207ENST00000478254 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
GFM1-207ENST00000478254 MPNDQ8N594 471 aa14.42□□□□□ -0.1
GFM1-207ENST00000478254 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
GFM1-207ENST00000478254 SLFN5Q08AF3 891 aa14.42□□□□□ -0.1
GFM1-207ENST00000478254 USP19O94966 1318 aa14.42□□□□□ -0.1
GFM1-207ENST00000478254 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
GFM1-207ENST00000478254 DAPK1P53355 1430 aa14.41□□□□□ -0.1
GFM1-207ENST00000478254 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
GFM1-207ENST00000478254 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
GFM1-207ENST00000478254 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
GFM1-207ENST00000478254 SUPT6HQ7KZ85 1726 aaKnown RBP14.41□□□□□ -0.1
GFM1-207ENST00000478254 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
GFM1-207ENST00000478254 ABCC5O15440 1437 aa14.4□□□□□ -0.1
GFM1-207ENST00000478254 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
GFM1-207ENST00000478254 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
GFM1-207ENST00000478254 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
GFM1-207ENST00000478254 KIAA1107Q9UPP5 1409 aa14.39□□□□□ -0.11
GFM1-207ENST00000478254 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
GFM1-207ENST00000478254 DNTTIP2Q5QJE6 756 aaKnown RBP14.38□□□□□ -0.11
GFM1-207ENST00000478254 CGNL1Q0VF96 1302 aa14.38□□□□□ -0.11
GFM1-207ENST00000478254 ITPRIPQ8IWB1 547 aa14.38□□□□□ -0.11
GFM1-207ENST00000478254 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
GFM1-207ENST00000478254 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
GFM1-207ENST00000478254 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 PMFBP1Q8TBY8 1022 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 E9PSI1 815 aa14.36□□□□□ -0.11
GFM1-207ENST00000478254 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
GFM1-207ENST00000478254 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
GFM1-207ENST00000478254 RLBP1P12271 317 aa14.35□□□□□ -0.11
GFM1-207ENST00000478254 GAS2L3Q86XJ1 694 aa14.35□□□□□ -0.11
GFM1-207ENST00000478254 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
GFM1-207ENST00000478254 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
GFM1-207ENST00000478254 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
GFM1-207ENST00000478254 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
GFM1-207ENST00000478254 LNPKQ9C0E8 428 aa14.34□□□□□ -0.11
GFM1-207ENST00000478254 ANTXR1Q9H6X2 564 aa14.34□□□□□ -0.11
GFM1-207ENST00000478254 NASPP49321 788 aaPredicted RBP14.34□□□□□ -0.11
GFM1-207ENST00000478254 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
GFM1-207ENST00000478254 PTMAP06454 111 aaKnown RBP14.33□□□□□ -0.12
GFM1-207ENST00000478254 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
GFM1-207ENST00000478254 GOLGA6L22H0YM25 854 aa14.33□□□□□ -0.12
GFM1-207ENST00000478254 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
GFM1-207ENST00000478254 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
GFM1-207ENST00000478254 ANKRD50Q9ULJ7 1429 aa14.32□□□□□ -0.12
GFM1-207ENST00000478254 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
GFM1-207ENST00000478254 TNPO1Q92973 898 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms