RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
CBWD3-206ENST00000478048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
CBWD3-206ENST00000478048 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
CBWD3-206ENST00000478048 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
CBWD3-206ENST00000478048 HECW2Q9P2P5 1572 aa17.47■□□□□ 0.39
CBWD3-206ENST00000478048 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
CBWD3-206ENST00000478048 ITGAEP38570 1179 aa17.47■□□□□ 0.39
CBWD3-206ENST00000478048 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
CBWD3-206ENST00000478048 PTPRKQ15262 1439 aa17.46■□□□□ 0.39
CBWD3-206ENST00000478048 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
CBWD3-206ENST00000478048 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
CBWD3-206ENST00000478048 CROCC2H7BZ55 1655 aa17.46■□□□□ 0.39
CBWD3-206ENST00000478048 INO80Q9ULG1 1556 aaPredicted RBP17.45■□□□□ 0.38
CBWD3-206ENST00000478048 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
CBWD3-206ENST00000478048 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
CBWD3-206ENST00000478048 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
CBWD3-206ENST00000478048 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
CBWD3-206ENST00000478048 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
CBWD3-206ENST00000478048 SSUH2Q9Y2M2 353 aa17.44■□□□□ 0.38
CBWD3-206ENST00000478048 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
CBWD3-206ENST00000478048 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
CBWD3-206ENST00000478048 MAST1Q9Y2H9 1570 aa17.42■□□□□ 0.38
CBWD3-206ENST00000478048 SHANK2Q9UPX8 1470 aa17.42■□□□□ 0.38
CBWD3-206ENST00000478048 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
CBWD3-206ENST00000478048 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-206ENST00000478048 DIP2CQ9Y2E4 1556 aa17.41■□□□□ 0.38
CBWD3-206ENST00000478048 ATP10AO60312 1499 aa17.37■□□□□ 0.37
CBWD3-206ENST00000478048 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
CBWD3-206ENST00000478048 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
CBWD3-206ENST00000478048 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
CBWD3-206ENST00000478048 SIGLEC1Q9BZZ2 1709 aa17.36■□□□□ 0.37
CBWD3-206ENST00000478048 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
CBWD3-206ENST00000478048 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
CBWD3-206ENST00000478048 PLXNC1O60486 1568 aa17.35■□□□□ 0.37
CBWD3-206ENST00000478048 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
CBWD3-206ENST00000478048 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
CBWD3-206ENST00000478048 A2MP01023 1474 aa17.33■□□□□ 0.37
CBWD3-206ENST00000478048 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.37
CBWD3-206ENST00000478048 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
CBWD3-206ENST00000478048 DHX29Q7Z478 1369 aaKnown RBP17.31■□□□□ 0.36
CBWD3-206ENST00000478048 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
CBWD3-206ENST00000478048 HAX1O00165 279 aa17.3■□□□□ 0.36
CBWD3-206ENST00000478048 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-206ENST00000478048 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
CBWD3-206ENST00000478048 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-206ENST00000478048 AGLP35573 1532 aa17.26■□□□□ 0.35
CBWD3-206ENST00000478048 NAIPQ13075 1403 aa17.25■□□□□ 0.35
CBWD3-206ENST00000478048 KIF3BO15066 747 aa17.25■□□□□ 0.35
CBWD3-206ENST00000478048 MLECQ14165 292 aa17.25■□□□□ 0.35
CBWD3-206ENST00000478048 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
CBWD3-206ENST00000478048 HFM1A2PYH4 1435 aa17.24■□□□□ 0.35
CBWD3-206ENST00000478048 ERBINQ96RT1 1412 aa17.24■□□□□ 0.35
CBWD3-206ENST00000478048 GCC2Q8IWJ2 1684 aa17.23■□□□□ 0.35
CBWD3-206ENST00000478048 GGT6Q6P531 493 aa17.21■□□□□ 0.35
CBWD3-206ENST00000478048 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
CBWD3-206ENST00000478048 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
CBWD3-206ENST00000478048 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
CBWD3-206ENST00000478048 MROH1Q8NDA8 1641 aa17.17■□□□□ 0.34
CBWD3-206ENST00000478048 RNF17Q9BXT8 1623 aaKnown RBP17.17■□□□□ 0.34
CBWD3-206ENST00000478048 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
CBWD3-206ENST00000478048 ADAMTSL3P82987 1691 aa17.15■□□□□ 0.34
CBWD3-206ENST00000478048 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
CBWD3-206ENST00000478048 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
CBWD3-206ENST00000478048 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
CBWD3-206ENST00000478048 MADDQ8WXG6 1647 aa17.14■□□□□ 0.33
CBWD3-206ENST00000478048 PRDM15P57071 1507 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-206ENST00000478048 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
CBWD3-206ENST00000478048 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
CBWD3-206ENST00000478048 UNC13BO14795 1591 aa17.12■□□□□ 0.33
CBWD3-206ENST00000478048 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
CBWD3-206ENST00000478048 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
CBWD3-206ENST00000478048 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
CBWD3-206ENST00000478048 VWDEQ8N2E2 1590 aa17.09■□□□□ 0.33
CBWD3-206ENST00000478048 CEP152O94986 1710 aa17.09■□□□□ 0.33
CBWD3-206ENST00000478048 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
CBWD3-206ENST00000478048 ABCC3O15438 1527 aa17.09■□□□□ 0.33
CBWD3-206ENST00000478048 NUP155O75694 1391 aa17.09■□□□□ 0.33
CBWD3-206ENST00000478048 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
CBWD3-206ENST00000478048 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.32
CBWD3-206ENST00000478048 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CBWD3-206ENST00000478048 KANK1Q14678 1352 aa17.07■□□□□ 0.32
CBWD3-206ENST00000478048 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
CBWD3-206ENST00000478048 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
CBWD3-206ENST00000478048 ZC3H13Q5T200 1668 aaKnown RBP17.05■□□□□ 0.32
CBWD3-206ENST00000478048 ZMYM3Q14202 1370 aa17.05■□□□□ 0.32
CBWD3-206ENST00000478048 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
CBWD3-206ENST00000478048 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
CBWD3-206ENST00000478048 PTPRMP28827 1452 aa17.03■□□□□ 0.32
CBWD3-206ENST00000478048 LMTK2Q8IWU2 1503 aa17.03■□□□□ 0.32
CBWD3-206ENST00000478048 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
CBWD3-206ENST00000478048 PZPP20742 1482 aa17.03■□□□□ 0.32
CBWD3-206ENST00000478048 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
CBWD3-206ENST00000478048 HRCP23327 699 aa17.02■□□□□ 0.32
CBWD3-206ENST00000478048 C3P01024 1663 aa17.02■□□□□ 0.32
CBWD3-206ENST00000478048 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.31
CBWD3-206ENST00000478048 TET3O43151 1660 aa17■□□□□ 0.31
CBWD3-206ENST00000478048 EFCAB6Q5THR3 1501 aa16.99■□□□□ 0.31
CBWD3-206ENST00000478048 EVX2Q03828 476 aa16.99■□□□□ 0.31
CBWD3-206ENST00000478048 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-206ENST00000478048 NPATQ14207 1427 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms