RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 TSPY4P0CV99 314 aa29.65■■■□□ 2.34
PRKCD-204ENST00000477794 TSPY10P0CW01 314 aa29.65■■■□□ 2.34
PRKCD-204ENST00000477794 CAMSAP2Q08AD1 1489 aa29.65■■■□□ 2.34
PRKCD-204ENST00000477794 WASHC2CQ9Y4E1 1318 aa29.65■■■□□ 2.34
PRKCD-204ENST00000477794 TNRQ92752 1358 aa29.64■■■□□ 2.33
PRKCD-204ENST00000477794 KDM5DQ9BY66 1539 aa29.63■■■□□ 2.33
PRKCD-204ENST00000477794 SPATA31D1Q6ZQQ2 1576 aa29.61■■■□□ 2.33
PRKCD-204ENST00000477794 PZPP20742 1482 aa29.6■■■□□ 2.33
PRKCD-204ENST00000477794 DNMT1P26358 1616 aaKnown RBP29.57■■■□□ 2.32
PRKCD-204ENST00000477794 SOCS7O14512 581 aa29.57■■■□□ 2.32
PRKCD-204ENST00000477794 ARHGEF5Q12774 1597 aa29.56■■■□□ 2.32
PRKCD-204ENST00000477794 FBXO31Q5XUX0 539 aaPredicted RBP29.55■■■□□ 2.32
PRKCD-204ENST00000477794 THEMISQ8N1K5 641 aaPredicted RBP29.55■■■□□ 2.32
PRKCD-204ENST00000477794 ILDR2Q71H61 639 aa29.54■■■□□ 2.32
PRKCD-204ENST00000477794 ANKLE2Q86XL3 938 aa29.53■■■□□ 2.32
PRKCD-204ENST00000477794 NLRP1Q9C000 1473 aa29.53■■■□□ 2.32
PRKCD-204ENST00000477794 MIA2Q96PC5 1412 aa29.5■■■□□ 2.31
PRKCD-204ENST00000477794 VPS8Q8N3P4 1428 aa29.48■■■□□ 2.31
PRKCD-204ENST00000477794 CPS1P31327 1500 aa29.48■■■□□ 2.31
PRKCD-204ENST00000477794 LRRC9Q6ZRR7 1453 aa29.47■■■□□ 2.31
PRKCD-204ENST00000477794 POLR1AO95602 1720 aaPredicted RBP29.46■■■□□ 2.31
PRKCD-204ENST00000477794 TOM1O60784 492 aa29.46■■■□□ 2.31
PRKCD-204ENST00000477794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.44■■■□□ 2.3
PRKCD-204ENST00000477794 UGGT1Q9NYU2 1555 aa29.43■■■□□ 2.3
PRKCD-204ENST00000477794 SHANK2Q9UPX8 1470 aa29.43■■■□□ 2.3
PRKCD-204ENST00000477794 SCAF1Q9H7N4 1312 aaKnown RBP29.43■■■□□ 2.3
PRKCD-204ENST00000477794 NEURL4Q96JN8 1562 aa29.4■■■□□ 2.3
PRKCD-204ENST00000477794 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.3
PRKCD-204ENST00000477794 NPHP4O75161 1426 aaPredicted RBP29.38■■■□□ 2.29
PRKCD-204ENST00000477794 MAP3K1Q13233 1512 aa29.38■■■□□ 2.29
PRKCD-204ENST00000477794 RNF17Q9BXT8 1623 aaKnown RBP29.38■■■□□ 2.29
PRKCD-204ENST00000477794 ZC3H13Q5T200 1668 aaKnown RBP29.37■■■□□ 2.29
PRKCD-204ENST00000477794 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
PRKCD-204ENST00000477794 MED14O60244 1454 aa29.36■■■□□ 2.29
PRKCD-204ENST00000477794 DEPDC5O75140 1603 aa29.35■■■□□ 2.29
PRKCD-204ENST00000477794 EIF2AK4Q9P2K8 1649 aaKnown RBP29.35■■■□□ 2.29
PRKCD-204ENST00000477794 PIP4K2BP78356 416 aa29.35■■■□□ 2.29
PRKCD-204ENST00000477794 ABCC3O15438 1527 aa29.35■■■□□ 2.29
PRKCD-204ENST00000477794 APLP2Q06481 763 aa29.3■■■□□ 2.28
PRKCD-204ENST00000477794 DUOX2Q9NRD8 1548 aa29.29■■■□□ 2.28
PRKCD-204ENST00000477794 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
PRKCD-204ENST00000477794 HSPA1LP34931 641 aa29.28■■■□□ 2.28
PRKCD-204ENST00000477794 KANK4Q5T7N3 995 aaPredicted RBP29.28■■■□□ 2.28
PRKCD-204ENST00000477794 VWDEQ8N2E2 1590 aa29.27■■■□□ 2.28
PRKCD-204ENST00000477794 LOC105371045A0A1W2PR82 267 aa29.27■■■□□ 2.28
PRKCD-204ENST00000477794 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
PRKCD-204ENST00000477794 KIF15Q9NS87 1388 aa29.23■■■□□ 2.27
PRKCD-204ENST00000477794 ERBINQ96RT1 1412 aa29.2■■■□□ 2.27
PRKCD-204ENST00000477794 MROH1Q8NDA8 1641 aa29.19■■■□□ 2.26
PRKCD-204ENST00000477794 KANK1Q14678 1352 aa29.18■■■□□ 2.26
PRKCD-204ENST00000477794 ARHGAP31Q2M1Z3 1444 aa29.18■■■□□ 2.26
PRKCD-204ENST00000477794 SCAF11Q99590 1463 aaKnown RBP29.17■■■□□ 2.26
PRKCD-204ENST00000477794 EID1Q9Y6B2 187 aa29.17■■■□□ 2.26
PRKCD-204ENST00000477794 RRP7BPQ9NSQ0 103 aa29.15■■■□□ 2.26
PRKCD-204ENST00000477794 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
PRKCD-204ENST00000477794 CEP152O94986 1710 aa29.14■■■□□ 2.26
PRKCD-204ENST00000477794 SYNMO15061 1565 aa29.14■■■□□ 2.26
PRKCD-204ENST00000477794 TXNDC2Q86VQ3 553 aa29.13■■■□□ 2.25
PRKCD-204ENST00000477794 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
PRKCD-204ENST00000477794 ABCC5O15440 1437 aa29.12■■■□□ 2.25
PRKCD-204ENST00000477794 LRRC7Q96NW7 1537 aa29.12■■■□□ 2.25
PRKCD-204ENST00000477794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.12■■■□□ 2.25
PRKCD-204ENST00000477794 STAG3Q9UJ98 1225 aa29.12■■■□□ 2.25
PRKCD-204ENST00000477794 PHF23Q9BUL5 403 aaPredicted RBP29.11■■■□□ 2.25
PRKCD-204ENST00000477794 UBR1Q8IWV7 1749 aa29.11■■■□□ 2.25
PRKCD-204ENST00000477794 PTPN23Q9H3S7 1636 aa29.09■■■□□ 2.25
PRKCD-204ENST00000477794 ANKRD30AQ9BXX3 1397 aa29.09■■■□□ 2.25
PRKCD-204ENST00000477794 SLIT1O75093 1534 aa29.09■■■□□ 2.25
PRKCD-204ENST00000477794 DAPK1P53355 1430 aa29.08■■■□□ 2.25
PRKCD-204ENST00000477794 CROCC2H7BZ55 1655 aa29.08■■■□□ 2.25
PRKCD-204ENST00000477794 ARHGAP23Q9P227 1491 aa29.07■■■□□ 2.24
PRKCD-204ENST00000477794 FGD6Q6ZV73 1430 aa29.05■■■□□ 2.24
PRKCD-204ENST00000477794 CFAP65Q6ZU64 1925 aaKnown RBP29.05■■■□□ 2.24
PRKCD-204ENST00000477794 LTKP29376 864 aa29.04■■■□□ 2.24
PRKCD-204ENST00000477794 TMEM2Q9UHN6 1383 aa29.02■■■□□ 2.24
PRKCD-204ENST00000477794 ALKQ9UM73 1620 aa29.01■■■□□ 2.23
PRKCD-204ENST00000477794 STRCP1A6NGW2 1772 aa28.99■■■□□ 2.23
PRKCD-204ENST00000477794 CHIC2Q9UKJ5 165 aa28.98■■■□□ 2.23
PRKCD-204ENST00000477794 SENP3Q9H4L4 574 aaPredicted RBP28.97■■■□□ 2.23
PRKCD-204ENST00000477794 LMTK2Q8IWU2 1503 aa28.97■■■□□ 2.23
PRKCD-204ENST00000477794 EFCAB6Q5THR3 1501 aa28.96■■■□□ 2.23
PRKCD-204ENST00000477794 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
PRKCD-204ENST00000477794 KDM5AP29375 1690 aaKnown RBP28.94■■■□□ 2.22
PRKCD-204ENST00000477794 IDI1Q13907 227 aa28.93■■■□□ 2.22
PRKCD-204ENST00000477794 SLC52A1Q9NWF4 448 aa28.92■■■□□ 2.22
PRKCD-204ENST00000477794 KCNA6P17658 529 aa28.88■■■□□ 2.21
PRKCD-204ENST00000477794 FAM50AQ14320 339 aaKnown RBP28.86■■■□□ 2.21
PRKCD-204ENST00000477794 BCANQ96GW7 911 aa28.86■■■□□ 2.21
PRKCD-204ENST00000477794 NOS1P29475 1434 aa28.86■■■□□ 2.21
PRKCD-204ENST00000477794 ADGRL2O95490 1459 aa28.85■■■□□ 2.21
PRKCD-204ENST00000477794 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
PRKCD-204ENST00000477794 TMEM94Q12767 1356 aa28.85■■■□□ 2.21
PRKCD-204ENST00000477794 FAM135BQ49AJ0 1406 aa28.85■■■□□ 2.21
PRKCD-204ENST00000477794 PROSER2Q86WR7 435 aaPredicted RBP28.84■■■□□ 2.21
PRKCD-204ENST00000477794 RPRD2Q5VT52 1461 aaKnown RBP28.84■■■□□ 2.21
PRKCD-204ENST00000477794 SLC26A8Q96RN1 970 aa28.83■■■□□ 2.21
PRKCD-204ENST00000477794 ADGRB3O60242 1522 aa28.83■■■□□ 2.21
PRKCD-204ENST00000477794 ANKRD50Q9ULJ7 1429 aa28.82■■■□□ 2.2
PRKCD-204ENST00000477794 NKTRP30414 1462 aaKnown RBP28.78■■■□□ 2.2
PRKCD-204ENST00000477794 PPP1R15AO75807 674 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms