RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 KIF3BO15066 747 aa23.83■■□□□ 1.41
COL11A2-206ENST00000477772 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
COL11A2-206ENST00000477772 SETD5Q9C0A6 1442 aa23.82■■□□□ 1.4
COL11A2-206ENST00000477772 RNF17Q9BXT8 1623 aaKnown RBP23.79■■□□□ 1.4
COL11A2-206ENST00000477772 MROH1Q8NDA8 1641 aa23.78■■□□□ 1.4
COL11A2-206ENST00000477772 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
COL11A2-206ENST00000477772 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
COL11A2-206ENST00000477772 MLECQ14165 292 aa23.77■■□□□ 1.4
COL11A2-206ENST00000477772 GGT6Q6P531 493 aa23.76■■□□□ 1.39
COL11A2-206ENST00000477772 UNC13BO14795 1591 aa23.74■■□□□ 1.39
COL11A2-206ENST00000477772 CLSPNQ9HAW4 1339 aa23.73■■□□□ 1.39
COL11A2-206ENST00000477772 DIEXFQ68CQ4 756 aaKnown RBP23.72■■□□□ 1.39
COL11A2-206ENST00000477772 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
COL11A2-206ENST00000477772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.72■■□□□ 1.39
COL11A2-206ENST00000477772 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
COL11A2-206ENST00000477772 VWDEQ8N2E2 1590 aa23.68■■□□□ 1.38
COL11A2-206ENST00000477772 ADAMTSL3P82987 1691 aa23.68■■□□□ 1.38
COL11A2-206ENST00000477772 NUP155O75694 1391 aa23.66■■□□□ 1.38
COL11A2-206ENST00000477772 CEP152O94986 1710 aa23.65■■□□□ 1.38
COL11A2-206ENST00000477772 FER1L4A9Z1Z3 1794 aa23.65■■□□□ 1.38
COL11A2-206ENST00000477772 MADDQ8WXG6 1647 aa23.64■■□□□ 1.38
COL11A2-206ENST00000477772 TRIM52Q96A61 297 aa23.64■■□□□ 1.38
COL11A2-206ENST00000477772 ABCC3O15438 1527 aa23.64■■□□□ 1.38
COL11A2-206ENST00000477772 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.38
COL11A2-206ENST00000477772 IQGAP3Q86VI3 1631 aa23.64■■□□□ 1.37
COL11A2-206ENST00000477772 PPP6R1Q9UPN7 881 aa23.63■■□□□ 1.37
COL11A2-206ENST00000477772 CLTCQ00610 1675 aaKnown RBP23.63■■□□□ 1.37
COL11A2-206ENST00000477772 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
COL11A2-206ENST00000477772 KANK1Q14678 1352 aa23.62■■□□□ 1.37
COL11A2-206ENST00000477772 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
COL11A2-206ENST00000477772 PZPP20742 1482 aa23.61■■□□□ 1.37
COL11A2-206ENST00000477772 ZC3H13Q5T200 1668 aaKnown RBP23.61■■□□□ 1.37
COL11A2-206ENST00000477772 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
COL11A2-206ENST00000477772 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
COL11A2-206ENST00000477772 RIMS1Q86UR5 1692 aaKnown RBP23.58■■□□□ 1.37
COL11A2-206ENST00000477772 CAMSAP1Q5T5Y3 1602 aa23.57■■□□□ 1.36
COL11A2-206ENST00000477772 ESF1Q9H501 851 aaKnown RBP23.56■■□□□ 1.36
COL11A2-206ENST00000477772 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
COL11A2-206ENST00000477772 TET3O43151 1660 aa23.56■■□□□ 1.36
COL11A2-206ENST00000477772 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
COL11A2-206ENST00000477772 CNTLNQ9NXG0 1405 aa23.56■■□□□ 1.36
COL11A2-206ENST00000477772 MROH2AA6NES4 1674 aa23.55■■□□□ 1.36
COL11A2-206ENST00000477772 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
COL11A2-206ENST00000477772 ZMYM3Q14202 1370 aa23.54■■□□□ 1.36
COL11A2-206ENST00000477772 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
COL11A2-206ENST00000477772 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
COL11A2-206ENST00000477772 E9PCH4 1651 aa23.52■■□□□ 1.36
COL11A2-206ENST00000477772 C3P01024 1663 aa23.51■■□□□ 1.35
COL11A2-206ENST00000477772 NPATQ14207 1427 aa23.5■■□□□ 1.35
COL11A2-206ENST00000477772 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
COL11A2-206ENST00000477772 CEBPAP49715 358 aaPredicted RBP23.5■■□□□ 1.35
COL11A2-206ENST00000477772 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
COL11A2-206ENST00000477772 PTPRMP28827 1452 aa23.49■■□□□ 1.35
COL11A2-206ENST00000477772 PKD2Q13563 968 aa23.49■■□□□ 1.35
COL11A2-206ENST00000477772 FOXD1Q16676 465 aa23.47■■□□□ 1.35
COL11A2-206ENST00000477772 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.35
COL11A2-206ENST00000477772 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
COL11A2-206ENST00000477772 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
COL11A2-206ENST00000477772 PREX1Q8TCU6 1659 aa23.43■■□□□ 1.34
COL11A2-206ENST00000477772 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
COL11A2-206ENST00000477772 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
COL11A2-206ENST00000477772 ERVK-7P63135 1459 aa23.4■■□□□ 1.34
COL11A2-206ENST00000477772 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.34
COL11A2-206ENST00000477772 NOS1P29475 1434 aa23.39■■□□□ 1.33
COL11A2-206ENST00000477772 PLA2R1Q13018 1463 aa23.39■■□□□ 1.33
COL11A2-206ENST00000477772 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
COL11A2-206ENST00000477772 PTPRTO14522 1441 aa23.37■■□□□ 1.33
COL11A2-206ENST00000477772 SYNMO15061 1565 aa23.37■■□□□ 1.33
COL11A2-206ENST00000477772 ANKRD30BQ9BXX2 1392 aa23.33■■□□□ 1.33
COL11A2-206ENST00000477772 UGGT1Q9NYU2 1555 aa23.32■■□□□ 1.32
COL11A2-206ENST00000477772 TNRQ92752 1358 aa23.32■■□□□ 1.32
COL11A2-206ENST00000477772 TRPM2O94759 1503 aa23.32■■□□□ 1.32
COL11A2-206ENST00000477772 SETD1BQ9UPS6 1966 aaKnown RBP23.31■■□□□ 1.32
COL11A2-206ENST00000477772 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
COL11A2-206ENST00000477772 CLTCL1P53675 1640 aa23.28■■□□□ 1.32
COL11A2-206ENST00000477772 NEUROD1Q13562 356 aa23.28■■□□□ 1.32
COL11A2-206ENST00000477772 IDI1Q13907 227 aa23.27■■□□□ 1.32
COL11A2-206ENST00000477772 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
COL11A2-206ENST00000477772 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
COL11A2-206ENST00000477772 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
COL11A2-206ENST00000477772 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
COL11A2-206ENST00000477772 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
COL11A2-206ENST00000477772 CEP170BQ9Y4F5 1589 aaPredicted RBP23.19■■□□□ 1.3
COL11A2-206ENST00000477772 ZNF142P52746 1687 aaPredicted RBP23.18■■□□□ 1.3
COL11A2-206ENST00000477772 A2ML1A8K2U0 1454 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 UHRF1BP1Q6BDS2 1440 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 TMEM131LA2VDJ0 1609 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 KIF1BO60333 1816 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 MYO5BQ9ULV0 1848 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 UBR1Q8IWV7 1749 aa23.18■■□□□ 1.3
COL11A2-206ENST00000477772 MIER1Q8N108 512 aa23.17■■□□□ 1.3
COL11A2-206ENST00000477772 ADGRB3O60242 1522 aa23.15■■□□□ 1.3
COL11A2-206ENST00000477772 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
COL11A2-206ENST00000477772 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
COL11A2-206ENST00000477772 LMTK3Q96Q04 1460 aa23.14■■□□□ 1.29
COL11A2-206ENST00000477772 SPATA31E1Q6ZUB1 1445 aa23.13■■□□□ 1.29
COL11A2-206ENST00000477772 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
COL11A2-206ENST00000477772 RGL3Q3MIN7 710 aa23.09■■□□□ 1.29
COL11A2-206ENST00000477772 NEURL4Q96JN8 1562 aa23.08■■□□□ 1.29
COL11A2-206ENST00000477772 TIMELESSQ9UNS1 1208 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms