RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KDM5DQ9BY66 1539 aa32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 DHX29Q7Z478 1369 aaKnown RBP32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 TNRQ92752 1358 aa32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 PZPP20742 1482 aa32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 SHANK2Q9UPX8 1470 aa32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 ZNF644Q9H582 1327 aaPredicted RBP32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 EHBP1L1Q8N3D4 1523 aa32.97■■■□□ 2.87
PDLIM1-202ENST00000477757 HSPA1LP34931 641 aa32.96■■■□□ 2.87
PDLIM1-202ENST00000477757 SCAF1Q9H7N4 1312 aaKnown RBP32.92■■■□□ 2.86
PDLIM1-202ENST00000477757 TOM1O60784 492 aa32.91■■■□□ 2.86
PDLIM1-202ENST00000477757 VWDEQ8N2E2 1590 aa32.91■■■□□ 2.86
PDLIM1-202ENST00000477757 PIP4K2BP78356 416 aa32.9■■■□□ 2.86
PDLIM1-202ENST00000477757 CEP162Q5TB80 1403 aa32.88■■■□□ 2.85
PDLIM1-202ENST00000477757 FBXO31Q5XUX0 539 aaPredicted RBP32.88■■■□□ 2.85
PDLIM1-202ENST00000477757 CCDC141Q6ZP82 1450 aa32.87■■■□□ 2.85
PDLIM1-202ENST00000477757 DEPDC5O75140 1603 aa32.86■■■□□ 2.85
PDLIM1-202ENST00000477757 NLRP1Q9C000 1473 aa32.86■■■□□ 2.85
PDLIM1-202ENST00000477757 ALKQ9UM73 1620 aa32.84■■■□□ 2.85
PDLIM1-202ENST00000477757 KIF3BO15066 747 aa32.84■■■□□ 2.85
PDLIM1-202ENST00000477757 MED14O60244 1454 aa32.84■■■□□ 2.85
PDLIM1-202ENST00000477757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.83■■■□□ 2.85
PDLIM1-202ENST00000477757 UGGT1Q9NYU2 1555 aa32.82■■■□□ 2.84
PDLIM1-202ENST00000477757 ANKLE2Q86XL3 938 aa32.81■■■□□ 2.84
PDLIM1-202ENST00000477757 MIA2Q96PC5 1412 aa32.81■■■□□ 2.84
PDLIM1-202ENST00000477757 NPHP4O75161 1426 aaPredicted RBP32.8■■■□□ 2.84
PDLIM1-202ENST00000477757 CAMSAP2Q08AD1 1489 aa32.8■■■□□ 2.84
PDLIM1-202ENST00000477757 WASHC2CQ9Y4E1 1318 aa32.77■■■□□ 2.84
PDLIM1-202ENST00000477757 THEMISQ8N1K5 641 aaPredicted RBP32.77■■■□□ 2.84
PDLIM1-202ENST00000477757 IQGAP1P46940 1657 aa32.76■■■□□ 2.84
PDLIM1-202ENST00000477757 NCOA2Q15596 1464 aa32.72■■■□□ 2.83
PDLIM1-202ENST00000477757 SYNMO15061 1565 aa32.71■■■□□ 2.83
PDLIM1-202ENST00000477757 ARHGEF5Q12774 1597 aa32.71■■■□□ 2.83
PDLIM1-202ENST00000477757 RNF17Q9BXT8 1623 aaKnown RBP32.7■■■□□ 2.83
PDLIM1-202ENST00000477757 RSPH4AQ5TD94 716 aa32.7■■■□□ 2.83
PDLIM1-202ENST00000477757 ZC3H13Q5T200 1668 aaKnown RBP32.69■■■□□ 2.82
PDLIM1-202ENST00000477757 STRCP1A6NGW2 1772 aa32.68■■■□□ 2.82
PDLIM1-202ENST00000477757 PHF23Q9BUL5 403 aaPredicted RBP32.67■■■□□ 2.82
PDLIM1-202ENST00000477757 LRRC7Q96NW7 1537 aa32.67■■■□□ 2.82
PDLIM1-202ENST00000477757 ABCC3O15438 1527 aa32.66■■■□□ 2.82
PDLIM1-202ENST00000477757 ERVK-7P63135 1459 aa32.61■■■□□ 2.81
PDLIM1-202ENST00000477757 EIF2AK4Q9P2K8 1649 aaKnown RBP32.59■■■□□ 2.81
PDLIM1-202ENST00000477757 MAST1Q9Y2H9 1570 aa32.58■■■□□ 2.81
PDLIM1-202ENST00000477757 MROH1Q8NDA8 1641 aa32.56■■■□□ 2.8
PDLIM1-202ENST00000477757 TSPY4P0CV99 314 aa32.55■■■□□ 2.8
PDLIM1-202ENST00000477757 TSPY10P0CW01 314 aa32.55■■■□□ 2.8
PDLIM1-202ENST00000477757 UBR1Q8IWV7 1749 aa32.54■■■□□ 2.8
PDLIM1-202ENST00000477757 SCAF11Q99590 1463 aaKnown RBP32.51■■■□□ 2.79
PDLIM1-202ENST00000477757 CEP152O94986 1710 aa32.48■■■□□ 2.79
PDLIM1-202ENST00000477757 SENP3Q9H4L4 574 aaPredicted RBP32.46■■■□□ 2.79
PDLIM1-202ENST00000477757 ARHGAP23Q9P227 1491 aa32.46■■■□□ 2.79
PDLIM1-202ENST00000477757 SLIT1O75093 1534 aa32.46■■■□□ 2.79
PDLIM1-202ENST00000477757 XIRP1Q702N8 1843 aaKnown RBP32.41■■■□□ 2.78
PDLIM1-202ENST00000477757 LRRC9Q6ZRR7 1453 aa32.4■■■□□ 2.78
PDLIM1-202ENST00000477757 PRDM15P57071 1507 aaPredicted RBP32.38■■■□□ 2.77
PDLIM1-202ENST00000477757 DUOX2Q9NRD8 1548 aa32.37■■■□□ 2.77
PDLIM1-202ENST00000477757 ARHGAP31Q2M1Z3 1444 aa32.36■■■□□ 2.77
PDLIM1-202ENST00000477757 RGS17Q9UGC6 210 aaPredicted RBP32.36■■■□□ 2.77
PDLIM1-202ENST00000477757 LTKP29376 864 aa32.35■■■□□ 2.77
PDLIM1-202ENST00000477757 CFAP65Q6ZU64 1925 aaKnown RBP32.32■■■□□ 2.76
PDLIM1-202ENST00000477757 TXNDC2Q86VQ3 553 aa32.32■■■□□ 2.76
PDLIM1-202ENST00000477757 FAM135BQ49AJ0 1406 aa32.3■■■□□ 2.76
PDLIM1-202ENST00000477757 PIK3C2BO00750 1634 aa32.29■■■□□ 2.76
PDLIM1-202ENST00000477757 MYOM3Q5VTT5 1437 aa32.28■■■□□ 2.76
PDLIM1-202ENST00000477757 VPS8Q8N3P4 1428 aa32.26■■■□□ 2.76
PDLIM1-202ENST00000477757 ERBINQ96RT1 1412 aa32.26■■■□□ 2.76
PDLIM1-202ENST00000477757 EID1Q9Y6B2 187 aa32.26■■■□□ 2.75
PDLIM1-202ENST00000477757 TMEM2Q9UHN6 1383 aa32.25■■■□□ 2.75
PDLIM1-202ENST00000477757 KDM5AP29375 1690 aaKnown RBP32.24■■■□□ 2.75
PDLIM1-202ENST00000477757 KIF15Q9NS87 1388 aa32.24■■■□□ 2.75
PDLIM1-202ENST00000477757 CROCC2H7BZ55 1655 aa32.23■■■□□ 2.75
PDLIM1-202ENST00000477757 MAP3K1Q13233 1512 aa32.22■■■□□ 2.75
PDLIM1-202ENST00000477757 TMEM94Q12767 1356 aa32.2■■■□□ 2.75
PDLIM1-202ENST00000477757 EFCAB6Q5THR3 1501 aa32.2■■■□□ 2.74
PDLIM1-202ENST00000477757 ROBO1Q9Y6N7 1651 aa32.19■■■□□ 2.74
PDLIM1-202ENST00000477757 TET3O43151 1660 aa32.15■■■□□ 2.74
PDLIM1-202ENST00000477757 KANK4Q5T7N3 995 aaPredicted RBP32.14■■■□□ 2.74
PDLIM1-202ENST00000477757 LMTK2Q8IWU2 1503 aa32.14■■■□□ 2.74
PDLIM1-202ENST00000477757 ABCC5O15440 1437 aa32.13■■■□□ 2.73
PDLIM1-202ENST00000477757 NWD1Q149M9 1564 aa32.13■■■□□ 2.73
PDLIM1-202ENST00000477757 POTEAQ6S8J7 498 aa32.13■■■□□ 2.73
PDLIM1-202ENST00000477757 NKTRP30414 1462 aaKnown RBP32.12■■■□□ 2.73
PDLIM1-202ENST00000477757 KCNA6P17658 529 aa32.11■■■□□ 2.73
PDLIM1-202ENST00000477757 KANK1Q14678 1352 aa32.1■■■□□ 2.73
PDLIM1-202ENST00000477757 STAG3Q9UJ98 1225 aa32.1■■■□□ 2.73
PDLIM1-202ENST00000477757 RRP7BPQ9NSQ0 103 aa32.08■■■□□ 2.73
PDLIM1-202ENST00000477757 ADGRB3O60242 1522 aa32.08■■■□□ 2.73
PDLIM1-202ENST00000477757 PTPN23Q9H3S7 1636 aa32.07■■■□□ 2.72
PDLIM1-202ENST00000477757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.06■■■□□ 2.725e-10■□□□□ 9
PDLIM1-202ENST00000477757 IDI1Q13907 227 aa32.05■■■□□ 2.72
PDLIM1-202ENST00000477757 DAPK1P53355 1430 aa32.04■■■□□ 2.72
PDLIM1-202ENST00000477757 PROSER2Q86WR7 435 aaPredicted RBP32.04■■■□□ 2.72
PDLIM1-202ENST00000477757 NOS1P29475 1434 aa32.03■■■□□ 2.72
PDLIM1-202ENST00000477757 SLC26A8Q96RN1 970 aa32.03■■■□□ 2.72
PDLIM1-202ENST00000477757 SETD1AO15047 1707 aaKnown RBP32■■■□□ 2.71
PDLIM1-202ENST00000477757 RBM33Q96EV2 1170 aaKnown RBP31.99■■■□□ 2.71
PDLIM1-202ENST00000477757 PHLPP1O60346 1717 aa31.99■■■□□ 2.71
PDLIM1-202ENST00000477757 MSH6P52701 1360 aa31.98■■■□□ 2.71
PDLIM1-202ENST00000477757 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
PDLIM1-202ENST00000477757 JCADQ9P266 1359 aa31.94■■■□□ 2.7
PDLIM1-202ENST00000477757 FGD6Q6ZV73 1430 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms