RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
CD40-205ENST00000477696 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
CD40-205ENST00000477696 PTPRKQ15262 1439 aa13.32□□□□□ -0.28
CD40-205ENST00000477696 PLA2R1Q13018 1463 aa13.32□□□□□ -0.28
CD40-205ENST00000477696 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
CD40-205ENST00000477696 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
CD40-205ENST00000477696 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
CD40-205ENST00000477696 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
CD40-205ENST00000477696 RNF17Q9BXT8 1623 aaKnown RBP13.31□□□□□ -0.28
CD40-205ENST00000477696 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
CD40-205ENST00000477696 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
CD40-205ENST00000477696 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
CD40-205ENST00000477696 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
CD40-205ENST00000477696 GGT6Q6P531 493 aa13.3□□□□□ -0.28
CD40-205ENST00000477696 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
CD40-205ENST00000477696 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
CD40-205ENST00000477696 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
CD40-205ENST00000477696 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
CD40-205ENST00000477696 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
CD40-205ENST00000477696 KIF3BO15066 747 aa13.28□□□□□ -0.28
CD40-205ENST00000477696 SHANK2Q9UPX8 1470 aa13.27□□□□□ -0.29
CD40-205ENST00000477696 PZPP20742 1482 aa13.26□□□□□ -0.29
CD40-205ENST00000477696 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
CD40-205ENST00000477696 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
CD40-205ENST00000477696 ABCC5O15440 1437 aa13.25□□□□□ -0.29
CD40-205ENST00000477696 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
CD40-205ENST00000477696 DAPK1P53355 1430 aa13.24□□□□□ -0.29
CD40-205ENST00000477696 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
CD40-205ENST00000477696 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
CD40-205ENST00000477696 WASHC2CQ9Y4E1 1318 aa13.23□□□□□ -0.29
CD40-205ENST00000477696 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
CD40-205ENST00000477696 CEP152O94986 1710 aa13.22□□□□□ -0.29
CD40-205ENST00000477696 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
CD40-205ENST00000477696 SOCS7O14512 581 aa13.22□□□□□ -0.29
CD40-205ENST00000477696 KIF15Q9NS87 1388 aa13.21□□□□□ -0.29
CD40-205ENST00000477696 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
CD40-205ENST00000477696 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
CD40-205ENST00000477696 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
CD40-205ENST00000477696 ABCC3O15438 1527 aa13.2□□□□□ -0.3
CD40-205ENST00000477696 ERBINQ96RT1 1412 aa13.2□□□□□ -0.3
CD40-205ENST00000477696 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
CD40-205ENST00000477696 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
CD40-205ENST00000477696 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
CD40-205ENST00000477696 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
CD40-205ENST00000477696 PKD2Q13563 968 aa13.18□□□□□ -0.3
CD40-205ENST00000477696 TNRQ92752 1358 aa13.17□□□□□ -0.3
CD40-205ENST00000477696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
CD40-205ENST00000477696 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
CD40-205ENST00000477696 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
CD40-205ENST00000477696 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
CD40-205ENST00000477696 IQGAP1P46940 1657 aa13.15□□□□□ -0.3
CD40-205ENST00000477696 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
CD40-205ENST00000477696 KANK1Q14678 1352 aa13.15□□□□□ -0.3
CD40-205ENST00000477696 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
CD40-205ENST00000477696 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
CD40-205ENST00000477696 MED14O60244 1454 aa13.13□□□□□ -0.31
CD40-205ENST00000477696 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
CD40-205ENST00000477696 CPS1P31327 1500 aa13.13□□□□□ -0.31
CD40-205ENST00000477696 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
CD40-205ENST00000477696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
CD40-205ENST00000477696 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
CD40-205ENST00000477696 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
CD40-205ENST00000477696 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
CD40-205ENST00000477696 MSH5O43196 834 aa13.11□□□□□ -0.31
CD40-205ENST00000477696 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
CD40-205ENST00000477696 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
CD40-205ENST00000477696 SYNMO15061 1565 aa13.11□□□□□ -0.31
CD40-205ENST00000477696 ANKRD50Q9ULJ7 1429 aa13.1□□□□□ -0.31
CD40-205ENST00000477696 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
CD40-205ENST00000477696 ITGAEP38570 1179 aa13.08□□□□□ -0.32
CD40-205ENST00000477696 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.32
CD40-205ENST00000477696 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
CD40-205ENST00000477696 ALKQ9UM73 1620 aa13.07□□□□□ -0.32
CD40-205ENST00000477696 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
CD40-205ENST00000477696 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
CD40-205ENST00000477696 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
CD40-205ENST00000477696 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
CD40-205ENST00000477696 SLIT1O75093 1534 aa13.06□□□□□ -0.32
CD40-205ENST00000477696 XIRP1Q702N8 1843 aaKnown RBP13.04□□□□□ -0.32
CD40-205ENST00000477696 EFCAB6Q5THR3 1501 aa13.04□□□□□ -0.32
CD40-205ENST00000477696 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
CD40-205ENST00000477696 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
CD40-205ENST00000477696 SCAF11Q99590 1463 aaKnown RBP13.01□□□□□ -0.33
CD40-205ENST00000477696 GCC2Q8IWJ2 1684 aa13□□□□□ -0.33
CD40-205ENST00000477696 UNC13BO14795 1591 aa13□□□□□ -0.33
CD40-205ENST00000477696 RPRD2Q5VT52 1461 aaKnown RBP13□□□□□ -0.33
CD40-205ENST00000477696 TET3O43151 1660 aa12.99□□□□□ -0.33
CD40-205ENST00000477696 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
CD40-205ENST00000477696 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
CD40-205ENST00000477696 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
CD40-205ENST00000477696 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
CD40-205ENST00000477696 SLC52A1Q9NWF4 448 aa12.98□□□□□ -0.33
CD40-205ENST00000477696 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
CD40-205ENST00000477696 NUP155O75694 1391 aa12.97□□□□□ -0.33
CD40-205ENST00000477696 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
CD40-205ENST00000477696 NOS1P29475 1434 aa12.96□□□□□ -0.33
CD40-205ENST00000477696 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
CD40-205ENST00000477696 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
CD40-205ENST00000477696 IDI1Q13907 227 aa12.95□□□□□ -0.34
CD40-205ENST00000477696 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms