RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
PABPC4-212ENST00000477556 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
PABPC4-212ENST00000477556 A2ML1A8K2U0 1454 aa20.76■□□□□ 0.91
PABPC4-212ENST00000477556 KDM5DQ9BY66 1539 aa20.76■□□□□ 0.91
PABPC4-212ENST00000477556 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
PABPC4-212ENST00000477556 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
PABPC4-212ENST00000477556 TNRQ92752 1358 aa20.75■□□□□ 0.91
PABPC4-212ENST00000477556 PZPP20742 1482 aa20.74■□□□□ 0.91
PABPC4-212ENST00000477556 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
PABPC4-212ENST00000477556 FBXO31Q5XUX0 539 aaPredicted RBP20.73■□□□□ 0.91
PABPC4-212ENST00000477556 ZNF335Q9H4Z2 1342 aaPredicted RBP20.73■□□□□ 0.91
PABPC4-212ENST00000477556 KANK4Q5T7N3 995 aaPredicted RBP20.71■□□□□ 0.91
PABPC4-212ENST00000477556 DNMT1P26358 1616 aaKnown RBP20.71■□□□□ 0.91
PABPC4-212ENST00000477556 MIA2Q96PC5 1412 aa20.7■□□□□ 0.9
PABPC4-212ENST00000477556 MYOM3Q5VTT5 1437 aa20.69■□□□□ 0.9
PABPC4-212ENST00000477556 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
PABPC4-212ENST00000477556 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
PABPC4-212ENST00000477556 APLP2Q06481 763 aa20.65■□□□□ 0.9
PABPC4-212ENST00000477556 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
PABPC4-212ENST00000477556 NLRP1Q9C000 1473 aa20.64■□□□□ 0.89
PABPC4-212ENST00000477556 UBAP1LF5GYI3 381 aa20.64■□□□□ 0.89
PABPC4-212ENST00000477556 RNF17Q9BXT8 1623 aaKnown RBP20.64■□□□□ 0.89
PABPC4-212ENST00000477556 ANKLE2Q86XL3 938 aa20.63■□□□□ 0.89
PABPC4-212ENST00000477556 EIF2AK4Q9P2K8 1649 aaKnown RBP20.62■□□□□ 0.89
PABPC4-212ENST00000477556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.89
PABPC4-212ENST00000477556 ABCC3O15438 1527 aa20.61■□□□□ 0.89
PABPC4-212ENST00000477556 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
PABPC4-212ENST00000477556 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
PABPC4-212ENST00000477556 UGGT1Q9NYU2 1555 aa20.6■□□□□ 0.89
PABPC4-212ENST00000477556 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
PABPC4-212ENST00000477556 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.89
PABPC4-212ENST00000477556 SPATA31D1Q6ZQQ2 1576 aa20.56■□□□□ 0.88
PABPC4-212ENST00000477556 ILDR2Q71H61 639 aa20.56■□□□□ 0.88
PABPC4-212ENST00000477556 CPS1P31327 1500 aa20.55■□□□□ 0.88
PABPC4-212ENST00000477556 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
PABPC4-212ENST00000477556 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
PABPC4-212ENST00000477556 SHANK2Q9UPX8 1470 aa20.55■□□□□ 0.88
PABPC4-212ENST00000477556 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
PABPC4-212ENST00000477556 MROH1Q8NDA8 1641 aa20.54■□□□□ 0.88
PABPC4-212ENST00000477556 ABCC5O15440 1437 aa20.53■□□□□ 0.88
PABPC4-212ENST00000477556 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
PABPC4-212ENST00000477556 MED14O60244 1454 aa20.53■□□□□ 0.88
PABPC4-212ENST00000477556 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
PABPC4-212ENST00000477556 RRP7BPQ9NSQ0 103 aa20.52■□□□□ 0.88
PABPC4-212ENST00000477556 ERBINQ96RT1 1412 aa20.52■□□□□ 0.87
PABPC4-212ENST00000477556 CEP152O94986 1710 aa20.51■□□□□ 0.87
PABPC4-212ENST00000477556 DAPK1P53355 1430 aa20.5■□□□□ 0.87
PABPC4-212ENST00000477556 CROCC2H7BZ55 1655 aa20.49■□□□□ 0.87
PABPC4-212ENST00000477556 TOM1O60784 492 aa20.49■□□□□ 0.87
PABPC4-212ENST00000477556 FGD6Q6ZV73 1430 aa20.49■□□□□ 0.87
PABPC4-212ENST00000477556 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
PABPC4-212ENST00000477556 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
PABPC4-212ENST00000477556 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
PABPC4-212ENST00000477556 SOCS7O14512 581 aa20.48■□□□□ 0.87
PABPC4-212ENST00000477556 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
PABPC4-212ENST00000477556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.47■□□□□ 0.87
PABPC4-212ENST00000477556 KANK1Q14678 1352 aa20.46■□□□□ 0.87
PABPC4-212ENST00000477556 IQGAP1P46940 1657 aa20.46■□□□□ 0.87
PABPC4-212ENST00000477556 PIP4K2BP78356 416 aa20.46■□□□□ 0.87
PABPC4-212ENST00000477556 CFAP65Q6ZU64 1925 aaKnown RBP20.46■□□□□ 0.87
PABPC4-212ENST00000477556 ANKRD30AQ9BXX3 1397 aa20.45■□□□□ 0.86
PABPC4-212ENST00000477556 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
PABPC4-212ENST00000477556 UBR1Q8IWV7 1749 aa20.42■□□□□ 0.86
PABPC4-212ENST00000477556 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
PABPC4-212ENST00000477556 HSPA1LP34931 641 aa20.4■□□□□ 0.86
PABPC4-212ENST00000477556 TXNDC2Q86VQ3 553 aa20.39■□□□□ 0.85
PABPC4-212ENST00000477556 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
PABPC4-212ENST00000477556 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
PABPC4-212ENST00000477556 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
PABPC4-212ENST00000477556 SLIT1O75093 1534 aa20.37■□□□□ 0.85
PABPC4-212ENST00000477556 LTKP29376 864 aa20.37■□□□□ 0.85
PABPC4-212ENST00000477556 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
PABPC4-212ENST00000477556 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
PABPC4-212ENST00000477556 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
PABPC4-212ENST00000477556 SYNMO15061 1565 aa20.34■□□□□ 0.85
PABPC4-212ENST00000477556 ADGRL2O95490 1459 aa20.34■□□□□ 0.85
PABPC4-212ENST00000477556 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
PABPC4-212ENST00000477556 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
PABPC4-212ENST00000477556 STRCP1A6NGW2 1772 aa20.33■□□□□ 0.84
PABPC4-212ENST00000477556 IDI1Q13907 227 aa20.31■□□□□ 0.84
PABPC4-212ENST00000477556 EFCAB6Q5THR3 1501 aa20.3■□□□□ 0.84
PABPC4-212ENST00000477556 ALKQ9UM73 1620 aa20.29■□□□□ 0.84
PABPC4-212ENST00000477556 NOS1P29475 1434 aa20.28■□□□□ 0.84
PABPC4-212ENST00000477556 ANKRD50Q9ULJ7 1429 aa20.28■□□□□ 0.84
PABPC4-212ENST00000477556 KDM5AP29375 1690 aaKnown RBP20.28■□□□□ 0.84
PABPC4-212ENST00000477556 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
PABPC4-212ENST00000477556 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
PABPC4-212ENST00000477556 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
PABPC4-212ENST00000477556 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
PABPC4-212ENST00000477556 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
PABPC4-212ENST00000477556 KCNA6P17658 529 aa20.2■□□□□ 0.82
PABPC4-212ENST00000477556 BCANQ96GW7 911 aa20.2■□□□□ 0.82
PABPC4-212ENST00000477556 SLC26A8Q96RN1 970 aa20.2■□□□□ 0.82
PABPC4-212ENST00000477556 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
PABPC4-212ENST00000477556 TET3O43151 1660 aa20.18■□□□□ 0.82
PABPC4-212ENST00000477556 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
PABPC4-212ENST00000477556 HDGFP51858 240 aaKnown RBP20.17■□□□□ 0.82
PABPC4-212ENST00000477556 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
PABPC4-212ENST00000477556 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
PABPC4-212ENST00000477556 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms