RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
TRAIP-206ENST00000477546 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
TRAIP-206ENST00000477546 FAM135AQ9P2D6 1515 aa17.36■□□□□ 0.37
TRAIP-206ENST00000477546 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
TRAIP-206ENST00000477546 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-206ENST00000477546 PZPP20742 1482 aa17.35■□□□□ 0.37
TRAIP-206ENST00000477546 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
TRAIP-206ENST00000477546 UGGT1Q9NYU2 1555 aa17.34■□□□□ 0.37
TRAIP-206ENST00000477546 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
TRAIP-206ENST00000477546 EEA1Q15075 1411 aa17.31■□□□□ 0.36
TRAIP-206ENST00000477546 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAIP-206ENST00000477546 MIA2Q96PC5 1412 aa17.3■□□□□ 0.36
TRAIP-206ENST00000477546 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
TRAIP-206ENST00000477546 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
TRAIP-206ENST00000477546 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
TRAIP-206ENST00000477546 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
TRAIP-206ENST00000477546 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
TRAIP-206ENST00000477546 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
TRAIP-206ENST00000477546 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
TRAIP-206ENST00000477546 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
TRAIP-206ENST00000477546 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
TRAIP-206ENST00000477546 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
TRAIP-206ENST00000477546 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
TRAIP-206ENST00000477546 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
TRAIP-206ENST00000477546 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
TRAIP-206ENST00000477546 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
TRAIP-206ENST00000477546 JCADQ9P266 1359 aa17.21■□□□□ 0.35
TRAIP-206ENST00000477546 XIRP1Q702N8 1843 aaKnown RBP17.21■□□□□ 0.35
TRAIP-206ENST00000477546 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
TRAIP-206ENST00000477546 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
TRAIP-206ENST00000477546 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
TRAIP-206ENST00000477546 SCAF11Q99590 1463 aaKnown RBP17.18■□□□□ 0.34
TRAIP-206ENST00000477546 KIF3BO15066 747 aa17.18■□□□□ 0.34
TRAIP-206ENST00000477546 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
TRAIP-206ENST00000477546 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
TRAIP-206ENST00000477546 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
TRAIP-206ENST00000477546 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
TRAIP-206ENST00000477546 CDK12Q9NYV4 1490 aaPredicted RBP17.15■□□□□ 0.34
TRAIP-206ENST00000477546 RXRBP28702 533 aa17.13■□□□□ 0.33
TRAIP-206ENST00000477546 LRP6O75581 1613 aa17.13■□□□□ 0.33
TRAIP-206ENST00000477546 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
TRAIP-206ENST00000477546 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
TRAIP-206ENST00000477546 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
TRAIP-206ENST00000477546 LTKP29376 864 aa17.11■□□□□ 0.33
TRAIP-206ENST00000477546 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
TRAIP-206ENST00000477546 ARHGAP23Q9P227 1491 aa17.11■□□□□ 0.33
TRAIP-206ENST00000477546 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
TRAIP-206ENST00000477546 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
TRAIP-206ENST00000477546 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
TRAIP-206ENST00000477546 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
TRAIP-206ENST00000477546 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
TRAIP-206ENST00000477546 SLIT1O75093 1534 aa17.09■□□□□ 0.33
TRAIP-206ENST00000477546 ERVK-7P63135 1459 aa17.08■□□□□ 0.32
TRAIP-206ENST00000477546 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
TRAIP-206ENST00000477546 UBR1Q8IWV7 1749 aa17.06■□□□□ 0.32
TRAIP-206ENST00000477546 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
TRAIP-206ENST00000477546 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
TRAIP-206ENST00000477546 KCNA6P17658 529 aa17.05■□□□□ 0.32
TRAIP-206ENST00000477546 SLAIN2Q9P270 581 aa17.05■□□□□ 0.32
TRAIP-206ENST00000477546 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
TRAIP-206ENST00000477546 MSH6P52701 1360 aa17.04■□□□□ 0.32
TRAIP-206ENST00000477546 PROSER2Q86WR7 435 aaPredicted RBP17.04■□□□□ 0.32
TRAIP-206ENST00000477546 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
TRAIP-206ENST00000477546 FOXD1Q16676 465 aa17.03■□□□□ 0.32
TRAIP-206ENST00000477546 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
TRAIP-206ENST00000477546 ABCC3O15438 1527 aa17.02■□□□□ 0.32
TRAIP-206ENST00000477546 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
TRAIP-206ENST00000477546 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
TRAIP-206ENST00000477546 TIAM1Q13009 1591 aa17.02■□□□□ 0.31
TRAIP-206ENST00000477546 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
TRAIP-206ENST00000477546 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
TRAIP-206ENST00000477546 RGS12O14924 1447 aa16.99■□□□□ 0.31
TRAIP-206ENST00000477546 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
TRAIP-206ENST00000477546 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
TRAIP-206ENST00000477546 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
TRAIP-206ENST00000477546 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
TRAIP-206ENST00000477546 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
TRAIP-206ENST00000477546 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
TRAIP-206ENST00000477546 SETBP1Q9Y6X0 1596 aa16.96■□□□□ 0.31
TRAIP-206ENST00000477546 AFF2P51816 1311 aa16.96■□□□□ 0.3
TRAIP-206ENST00000477546 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
TRAIP-206ENST00000477546 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
TRAIP-206ENST00000477546 NUTM2DQ5VT03 806 aaPredicted RBP16.94■□□□□ 0.3
TRAIP-206ENST00000477546 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
TRAIP-206ENST00000477546 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
TRAIP-206ENST00000477546 RBM6P78332 1123 aaKnown RBP16.93■□□□□ 0.3
TRAIP-206ENST00000477546 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
TRAIP-206ENST00000477546 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
TRAIP-206ENST00000477546 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
TRAIP-206ENST00000477546 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
TRAIP-206ENST00000477546 TET3O43151 1660 aa16.92■□□□□ 0.3
TRAIP-206ENST00000477546 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
TRAIP-206ENST00000477546 QTRT2Q9H974 415 aaKnown RBP16.88■□□□□ 0.29
TRAIP-206ENST00000477546 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
TRAIP-206ENST00000477546 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
TRAIP-206ENST00000477546 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
TRAIP-206ENST00000477546 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
TRAIP-206ENST00000477546 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
TRAIP-206ENST00000477546 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
TRAIP-206ENST00000477546 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms