RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 MROH1Q8NDA8 1641 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 RRP7BPQ9NSQ0 103 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 KIF15Q9NS87 1388 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
COMMD6-209ENST00000477377 EIF2AK4Q9P2K8 1649 aaKnown RBP24.14■■□□□ 1.46
COMMD6-209ENST00000477377 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
COMMD6-209ENST00000477377 CHIC2Q9UKJ5 165 aa24.13■■□□□ 1.45
COMMD6-209ENST00000477377 STRCQ7RTU9 1775 aa24.13■■□□□ 1.45
COMMD6-209ENST00000477377 WASHC2CQ9Y4E1 1318 aa24.12■■□□□ 1.45
COMMD6-209ENST00000477377 FBXO31Q5XUX0 539 aaPredicted RBP24.12■■□□□ 1.45
COMMD6-209ENST00000477377 NCOA1Q15788 1441 aa24.11■■□□□ 1.45
COMMD6-209ENST00000477377 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
COMMD6-209ENST00000477377 PZPP20742 1482 aa24.09■■□□□ 1.45
COMMD6-209ENST00000477377 ABCC3O15438 1527 aa24.09■■□□□ 1.45
COMMD6-209ENST00000477377 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
COMMD6-209ENST00000477377 ADGRL2O95490 1459 aa24.08■■□□□ 1.45
COMMD6-209ENST00000477377 ANKRD30AQ9BXX3 1397 aa24.07■■□□□ 1.44
COMMD6-209ENST00000477377 MYO3AQ8NEV4 1616 aa24.06■■□□□ 1.44
COMMD6-209ENST00000477377 ZNF142P52746 1687 aaPredicted RBP24.03■■□□□ 1.44
COMMD6-209ENST00000477377 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
COMMD6-209ENST00000477377 CEP170BQ9Y4F5 1589 aaPredicted RBP24.02■■□□□ 1.44
COMMD6-209ENST00000477377 DEPDC5O75140 1603 aa24.01■■□□□ 1.43
COMMD6-209ENST00000477377 CAMSAP1Q5T5Y3 1602 aa24.01■■□□□ 1.43
COMMD6-209ENST00000477377 ZC3H13Q5T200 1668 aaKnown RBP24.01■■□□□ 1.43
COMMD6-209ENST00000477377 TNRQ92752 1358 aa24.01■■□□□ 1.43
COMMD6-209ENST00000477377 ILDR1Q86SU0 546 aaPredicted RBP23.99■■□□□ 1.43
COMMD6-209ENST00000477377 A2ML1A8K2U0 1454 aa23.99■■□□□ 1.43
COMMD6-209ENST00000477377 CEP152O94986 1710 aa23.98■■□□□ 1.43
COMMD6-209ENST00000477377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
COMMD6-209ENST00000477377 PTPRTO14522 1441 aa23.97■■□□□ 1.43
COMMD6-209ENST00000477377 SPATA31D1Q6ZQQ2 1576 aa23.97■■□□□ 1.43
COMMD6-209ENST00000477377 VWDEQ8N2E2 1590 aa23.96■■□□□ 1.43
COMMD6-209ENST00000477377 PLA2R1Q13018 1463 aa23.95■■□□□ 1.42
COMMD6-209ENST00000477377 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
COMMD6-209ENST00000477377 DMRT2Q9Y5R5 561 aa23.95■■□□□ 1.42
COMMD6-209ENST00000477377 ARHGAP31Q2M1Z3 1444 aa23.94■■□□□ 1.42
COMMD6-209ENST00000477377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.42
COMMD6-209ENST00000477377 ERVK-7P63135 1459 aa23.94■■□□□ 1.42
COMMD6-209ENST00000477377 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
COMMD6-209ENST00000477377 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
COMMD6-209ENST00000477377 LMTK2Q8IWU2 1503 aa23.92■■□□□ 1.42
COMMD6-209ENST00000477377 RRBP1Q9P2E9 1410 aaKnown RBP23.92■■□□□ 1.42
COMMD6-209ENST00000477377 NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
COMMD6-209ENST00000477377 PKD2Q13563 968 aa23.88■■□□□ 1.41
COMMD6-209ENST00000477377 CFAP65Q6ZU64 1925 aaKnown RBP23.87■■□□□ 1.41
COMMD6-209ENST00000477377 KANK1Q14678 1352 aa23.86■■□□□ 1.41
COMMD6-209ENST00000477377 ITGAEP38570 1179 aa23.85■■□□□ 1.41
COMMD6-209ENST00000477377 CERKQ8TCT0 537 aa23.85■■□□□ 1.41
COMMD6-209ENST00000477377 UGGT1Q9NYU2 1555 aa23.84■■□□□ 1.41
COMMD6-209ENST00000477377 LTBP4Q8N2S1 1624 aa23.82■■□□□ 1.4
COMMD6-209ENST00000477377 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
COMMD6-209ENST00000477377 THEMISQ8N1K5 641 aaPredicted RBP23.81■■□□□ 1.4
COMMD6-209ENST00000477377 NEURL4Q96JN8 1562 aa23.81■■□□□ 1.4
COMMD6-209ENST00000477377 EFCAB6Q5THR3 1501 aa23.79■■□□□ 1.4
COMMD6-209ENST00000477377 UNC13BO14795 1591 aa23.79■■□□□ 1.4
COMMD6-209ENST00000477377 NOS1P29475 1434 aa23.79■■□□□ 1.4
COMMD6-209ENST00000477377 UBR1Q8IWV7 1749 aa23.76■■□□□ 1.39
COMMD6-209ENST00000477377 SYNMO15061 1565 aa23.76■■□□□ 1.39
COMMD6-209ENST00000477377 IDI1Q13907 227 aa23.75■■□□□ 1.39
COMMD6-209ENST00000477377 ANKLE2Q86XL3 938 aa23.75■■□□□ 1.39
COMMD6-209ENST00000477377 ZNF335Q9H4Z2 1342 aaPredicted RBP23.75■■□□□ 1.39
COMMD6-209ENST00000477377 MED14O60244 1454 aa23.75■■□□□ 1.39
COMMD6-209ENST00000477377 POLR1AO95602 1720 aaPredicted RBP23.74■■□□□ 1.39
COMMD6-209ENST00000477377 TET3O43151 1660 aa23.72■■□□□ 1.39
COMMD6-209ENST00000477377 PIK3C2BO00750 1634 aa23.71■■□□□ 1.39
COMMD6-209ENST00000477377 RPRD2Q5VT52 1461 aaKnown RBP23.71■■□□□ 1.39
COMMD6-209ENST00000477377 ARHGAP23Q9P227 1491 aa23.71■■□□□ 1.39
COMMD6-209ENST00000477377 SLIT1O75093 1534 aa23.69■■□□□ 1.38
COMMD6-209ENST00000477377 NAIPQ13075 1403 aa23.69■■□□□ 1.38
COMMD6-209ENST00000477377 LTKP29376 864 aa23.69■■□□□ 1.38
COMMD6-209ENST00000477377 IQGAP3Q86VI3 1631 aa23.69■■□□□ 1.38
COMMD6-209ENST00000477377 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
COMMD6-209ENST00000477377 NUP155O75694 1391 aa23.67■■□□□ 1.38
COMMD6-209ENST00000477377 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
COMMD6-209ENST00000477377 E9PCH4 1651 aa23.66■■□□□ 1.38
COMMD6-209ENST00000477377 SLC52A1Q9NWF4 448 aa23.65■■□□□ 1.38
COMMD6-209ENST00000477377 TMEM2Q9UHN6 1383 aa23.64■■□□□ 1.37
COMMD6-209ENST00000477377 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
COMMD6-209ENST00000477377 SCAF11Q99590 1463 aaKnown RBP23.62■■□□□ 1.37
COMMD6-209ENST00000477377 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
COMMD6-209ENST00000477377 IQGAP1P46940 1657 aa23.61■■□□□ 1.37
COMMD6-209ENST00000477377 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
COMMD6-209ENST00000477377 IQSEC2Q5JU85 1478 aa23.61■■□□□ 1.37
COMMD6-209ENST00000477377 ADGRB3O60242 1522 aa23.59■■□□□ 1.37
COMMD6-209ENST00000477377 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
COMMD6-209ENST00000477377 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
COMMD6-209ENST00000477377 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
COMMD6-209ENST00000477377 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
COMMD6-209ENST00000477377 ZFYVE9O95405 1425 aa23.52■■□□□ 1.36
COMMD6-209ENST00000477377 CPS1P31327 1500 aa23.52■■□□□ 1.36
COMMD6-209ENST00000477377 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
COMMD6-209ENST00000477377 RIMS2Q9UQ26 1411 aa23.45■■□□□ 1.34
COMMD6-209ENST00000477377 SPHKAPQ2M3C7 1700 aa23.45■■□□□ 1.34
COMMD6-209ENST00000477377 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
COMMD6-209ENST00000477377 CHGAP10645 457 aaKnown RBP23.43■■□□□ 1.34
COMMD6-209ENST00000477377 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
COMMD6-209ENST00000477377 SLC26A8Q96RN1 970 aa23.43■■□□□ 1.34
COMMD6-209ENST00000477377 PLEKHG1Q9ULL1 1385 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms