RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
CLCNKA-205ENST00000477360 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
CLCNKA-205ENST00000477360 SETD1BQ9UPS6 1966 aaKnown RBP18.93■□□□□ 0.62
CLCNKA-205ENST00000477360 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
CLCNKA-205ENST00000477360 LMTK3Q96Q04 1460 aa18.92■□□□□ 0.62
CLCNKA-205ENST00000477360 C3P01024 1663 aa18.91■□□□□ 0.62
CLCNKA-205ENST00000477360 RRP7BPQ9NSQ0 103 aa18.89■□□□□ 0.61
CLCNKA-205ENST00000477360 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
CLCNKA-205ENST00000477360 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
CLCNKA-205ENST00000477360 CEBPAP49715 358 aaPredicted RBP18.88■□□□□ 0.61
CLCNKA-205ENST00000477360 PRDM15P57071 1507 aaPredicted RBP18.88■□□□□ 0.61
CLCNKA-205ENST00000477360 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
CLCNKA-205ENST00000477360 CLTCQ00610 1675 aaKnown RBP18.87■□□□□ 0.61
CLCNKA-205ENST00000477360 PTPRKQ15262 1439 aa18.87■□□□□ 0.61
CLCNKA-205ENST00000477360 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
CLCNKA-205ENST00000477360 PZPP20742 1482 aa18.86■□□□□ 0.61
CLCNKA-205ENST00000477360 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
CLCNKA-205ENST00000477360 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
CLCNKA-205ENST00000477360 ANKRD50Q9ULJ7 1429 aa18.85■□□□□ 0.61
CLCNKA-205ENST00000477360 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
CLCNKA-205ENST00000477360 ABCC3O15438 1527 aa18.84■□□□□ 0.61
CLCNKA-205ENST00000477360 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
CLCNKA-205ENST00000477360 KANK1Q14678 1352 aa18.83■□□□□ 0.61
CLCNKA-205ENST00000477360 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
CLCNKA-205ENST00000477360 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
CLCNKA-205ENST00000477360 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
CLCNKA-205ENST00000477360 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
CLCNKA-205ENST00000477360 TNRQ92752 1358 aa18.76■□□□□ 0.59
CLCNKA-205ENST00000477360 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
CLCNKA-205ENST00000477360 SPATA31D1Q6ZQQ2 1576 aa18.75■□□□□ 0.59
CLCNKA-205ENST00000477360 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
CLCNKA-205ENST00000477360 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
CLCNKA-205ENST00000477360 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
CLCNKA-205ENST00000477360 CAMSAP1Q5T5Y3 1602 aa18.73■□□□□ 0.59
CLCNKA-205ENST00000477360 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
CLCNKA-205ENST00000477360 RPRD2Q5VT52 1461 aaKnown RBP18.72■□□□□ 0.59
CLCNKA-205ENST00000477360 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
CLCNKA-205ENST00000477360 UNC13BO14795 1591 aa18.72■□□□□ 0.59
CLCNKA-205ENST00000477360 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
CLCNKA-205ENST00000477360 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
CLCNKA-205ENST00000477360 FBXO31Q5XUX0 539 aaPredicted RBP18.71■□□□□ 0.59
CLCNKA-205ENST00000477360 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
CLCNKA-205ENST00000477360 HFM1A2PYH4 1435 aa18.7■□□□□ 0.58
CLCNKA-205ENST00000477360 HSPA2P54652 639 aa18.7■□□□□ 0.58
CLCNKA-205ENST00000477360 ITGAEP38570 1179 aa18.69■□□□□ 0.58
CLCNKA-205ENST00000477360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLCNKA-205ENST00000477360 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
CLCNKA-205ENST00000477360 NAIPQ13075 1403 aa18.68■□□□□ 0.58
CLCNKA-205ENST00000477360 CEP152O94986 1710 aa18.68■□□□□ 0.58
CLCNKA-205ENST00000477360 PKD2Q13563 968 aa18.67■□□□□ 0.58
CLCNKA-205ENST00000477360 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
CLCNKA-205ENST00000477360 PTPRTO14522 1441 aa18.66■□□□□ 0.58
CLCNKA-205ENST00000477360 NOS1P29475 1434 aa18.65■□□□□ 0.58
CLCNKA-205ENST00000477360 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
CLCNKA-205ENST00000477360 TET3O43151 1660 aa18.64■□□□□ 0.57
CLCNKA-205ENST00000477360 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
CLCNKA-205ENST00000477360 NUP155O75694 1391 aa18.63■□□□□ 0.57
CLCNKA-205ENST00000477360 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
CLCNKA-205ENST00000477360 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
CLCNKA-205ENST00000477360 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CLCNKA-205ENST00000477360 KDM5AP29375 1690 aaKnown RBP18.6■□□□□ 0.57
CLCNKA-205ENST00000477360 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
CLCNKA-205ENST00000477360 MED14O60244 1454 aa18.55■□□□□ 0.56
CLCNKA-205ENST00000477360 ARHGAP23Q9P227 1491 aa18.54■□□□□ 0.56
CLCNKA-205ENST00000477360 SYNMO15061 1565 aa18.54■□□□□ 0.56
CLCNKA-205ENST00000477360 SLIT1O75093 1534 aa18.54■□□□□ 0.56
CLCNKA-205ENST00000477360 IDI1Q13907 227 aa18.53■□□□□ 0.56
CLCNKA-205ENST00000477360 UBR1Q8IWV7 1749 aa18.52■□□□□ 0.56
CLCNKA-205ENST00000477360 E9PCH4 1651 aa18.5■□□□□ 0.55
CLCNKA-205ENST00000477360 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
CLCNKA-205ENST00000477360 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
CLCNKA-205ENST00000477360 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
CLCNKA-205ENST00000477360 HRCP23327 699 aa18.49■□□□□ 0.55
CLCNKA-205ENST00000477360 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
CLCNKA-205ENST00000477360 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
CLCNKA-205ENST00000477360 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
CLCNKA-205ENST00000477360 POLR1AO95602 1720 aaPredicted RBP18.47■□□□□ 0.55
CLCNKA-205ENST00000477360 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
CLCNKA-205ENST00000477360 EID1Q9Y6B2 187 aa18.47■□□□□ 0.55
CLCNKA-205ENST00000477360 CFAP65Q6ZU64 1925 aaKnown RBP18.47■□□□□ 0.55
CLCNKA-205ENST00000477360 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
CLCNKA-205ENST00000477360 HDGFP51858 240 aaKnown RBP18.46■□□□□ 0.55
CLCNKA-205ENST00000477360 NPHP4O75161 1426 aaPredicted RBP18.45■□□□□ 0.54
CLCNKA-205ENST00000477360 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
CLCNKA-205ENST00000477360 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
CLCNKA-205ENST00000477360 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
CLCNKA-205ENST00000477360 TRPM2O94759 1503 aa18.43■□□□□ 0.54
CLCNKA-205ENST00000477360 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
CLCNKA-205ENST00000477360 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
CLCNKA-205ENST00000477360 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLCNKA-205ENST00000477360 LTKP29376 864 aa18.4■□□□□ 0.54
CLCNKA-205ENST00000477360 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
CLCNKA-205ENST00000477360 LTBP4Q8N2S1 1624 aa18.4■□□□□ 0.54
CLCNKA-205ENST00000477360 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
CLCNKA-205ENST00000477360 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
CLCNKA-205ENST00000477360 IQGAP1P46940 1657 aa18.38■□□□□ 0.53
CLCNKA-205ENST00000477360 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
CLCNKA-205ENST00000477360 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
CLCNKA-205ENST00000477360 CPS1P31327 1500 aa18.37■□□□□ 0.53
CLCNKA-205ENST00000477360 RIMS2Q9UQ26 1411 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms