RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, humanhuman

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-208ENST00000477216 RTEL1-TNFRSF6BF6WH68 1400 aa38.78■■■■□ 3.8
SKIL-208ENST00000477216 A2ML1A8K2U0 1454 aa38.77■■■■□ 3.8
SKIL-208ENST00000477216 FAM135AQ9P2D6 1515 aa38.73■■■■□ 3.79
SKIL-208ENST00000477216 DHX29Q7Z478 1369 aaKnown RBP38.7■■■■□ 3.78
SKIL-208ENST00000477216 RSPH4AQ5TD94 716 aa38.68■■■■□ 3.78
SKIL-208ENST00000477216 MYOM3Q5VTT5 1437 aa38.65■■■■□ 3.78
SKIL-208ENST00000477216 CPS1P31327 1500 aa38.65■■■■□ 3.78
SKIL-208ENST00000477216 DNMT1P26358 1616 aaKnown RBP38.65■■■■□ 3.78
SKIL-208ENST00000477216 TOM1O60784 492 aa38.65■■■■□ 3.78
SKIL-208ENST00000477216 MBD5Q9P267 1494 aa38.65■■■■□ 3.78
SKIL-208ENST00000477216 PPARGC1BQ86YN6 1023 aaKnown RBP38.64■■■■□ 3.78
SKIL-208ENST00000477216 TNRQ92752 1358 aa38.6■■■■□ 3.77
SKIL-208ENST00000477216 POLR1AO95602 1720 aaPredicted RBP38.58■■■■□ 3.77
SKIL-208ENST00000477216 KDM5DQ9BY66 1539 aa38.58■■■■□ 3.77
SKIL-208ENST00000477216 PZPP20742 1482 aa38.57■■■■□ 3.76
SKIL-208ENST00000477216 ZNF644Q9H582 1327 aaPredicted RBP38.57■■■■□ 3.76
SKIL-208ENST00000477216 KIF3BO15066 747 aa38.56■■■■□ 3.76
SKIL-208ENST00000477216 ANKLE2Q86XL3 938 aa38.56■■■■□ 3.76
SKIL-208ENST00000477216 MIA2Q96PC5 1412 aa38.55■■■■□ 3.76
SKIL-208ENST00000477216 THEMISQ8N1K5 641 aaPredicted RBP38.55■■■■□ 3.76
SKIL-208ENST00000477216 WASHC2CQ9Y4E1 1318 aa38.54■■■■□ 3.76
SKIL-208ENST00000477216 CCDC141Q6ZP82 1450 aa38.54■■■■□ 3.76
SKIL-208ENST00000477216 SCAF1Q9H7N4 1312 aaKnown RBP38.52■■■■□ 3.76
SKIL-208ENST00000477216 CAMSAP2Q08AD1 1489 aa38.52■■■■□ 3.76
SKIL-208ENST00000477216 SHANK2Q9UPX8 1470 aa38.52■■■■□ 3.76
SKIL-208ENST00000477216 NLRP1Q9C000 1473 aa38.51■■■■□ 3.76
SKIL-208ENST00000477216 FGD6Q6ZV73 1430 aa38.48■■■■□ 3.75
SKIL-208ENST00000477216 TSPY4P0CV99 314 aa38.44■■■■□ 3.74
SKIL-208ENST00000477216 TSPY10P0CW01 314 aa38.44■■■■□ 3.74
SKIL-208ENST00000477216 PIP4K2BP78356 416 aa38.44■■■■□ 3.74
SKIL-208ENST00000477216 NEURL4Q96JN8 1562 aa38.44■■■■□ 3.74
SKIL-208ENST00000477216 FBXO31Q5XUX0 539 aaPredicted RBP38.43■■■■□ 3.74
SKIL-208ENST00000477216 HSPA1LP34931 641 aa38.42■■■■□ 3.74
SKIL-208ENST00000477216 UGGT1Q9NYU2 1555 aa38.4■■■■□ 3.74
SKIL-208ENST00000477216 DEPDC5O75140 1603 aa38.4■■■■□ 3.74
SKIL-208ENST00000477216 PTPN23Q9H3S7 1636 aa38.4■■■■□ 3.74
SKIL-208ENST00000477216 MED14O60244 1454 aa38.39■■■■□ 3.74
SKIL-208ENST00000477216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.38■■■■□ 3.735e-7■■■■■ 29.7
SKIL-208ENST00000477216 NPHP4O75161 1426 aaPredicted RBP38.36■■■■□ 3.73
SKIL-208ENST00000477216 MED1Q15648 1581 aaPredicted RBP38.36■■■■□ 3.73
SKIL-208ENST00000477216 ARHGEF5Q12774 1597 aa38.34■■■■□ 3.73
SKIL-208ENST00000477216 VWDEQ8N2E2 1590 aa38.31■■■■□ 3.72
SKIL-208ENST00000477216 PHF23Q9BUL5 403 aaPredicted RBP38.28■■■■□ 3.72
SKIL-208ENST00000477216 ZC3H13Q5T200 1668 aaKnown RBP38.27■■■■□ 3.72
SKIL-208ENST00000477216 IQGAP1P46940 1657 aa38.25■■■■□ 3.71
SKIL-208ENST00000477216 FAM50AQ14320 339 aaKnown RBP38.24■■■■□ 3.71
SKIL-208ENST00000477216 RNF17Q9BXT8 1623 aaKnown RBP38.21■■■■□ 3.71
SKIL-208ENST00000477216 EIF2AK4Q9P2K8 1649 aaKnown RBP38.18■■■■□ 3.7
SKIL-208ENST00000477216 SYNMO15061 1565 aa38.18■■■■□ 3.7
SKIL-208ENST00000477216 ABCC5O15440 1437 aa38.16■■■■□ 3.7
SKIL-208ENST00000477216 RRBP1Q9P2E9 1410 aaKnown RBP38.16■■■■□ 3.7
SKIL-208ENST00000477216 MAST1Q9Y2H9 1570 aa38.15■■■■□ 3.7
SKIL-208ENST00000477216 ABCC3O15438 1527 aa38.15■■■■□ 3.7
SKIL-208ENST00000477216 DAPK1P53355 1430 aa38.14■■■■□ 3.7
SKIL-208ENST00000477216 ERVK-7P63135 1459 aa38.1■■■■□ 3.69
SKIL-208ENST00000477216 LRRC7Q96NW7 1537 aa38.09■■■■□ 3.69
SKIL-208ENST00000477216 CROCC2H7BZ55 1655 aa38.08■■■■□ 3.69
SKIL-208ENST00000477216 ALKQ9UM73 1620 aa38.05■■■■□ 3.68
SKIL-208ENST00000477216 SCAF11Q99590 1463 aaKnown RBP38.03■■■■□ 3.68
SKIL-208ENST00000477216 EID1Q9Y6B2 187 aa38■■■■□ 3.67
SKIL-208ENST00000477216 DUOX2Q9NRD8 1548 aa38■■■■□ 3.67
SKIL-208ENST00000477216 UBR1Q8IWV7 1749 aa37.98■■■■□ 3.67
SKIL-208ENST00000477216 STRCP1A6NGW2 1772 aa37.96■■■■□ 3.67
SKIL-208ENST00000477216 CHIC2Q9UKJ5 165 aa37.96■■■■□ 3.67
SKIL-208ENST00000477216 ARHGAP31Q2M1Z3 1444 aa37.95■■■■□ 3.67
SKIL-208ENST00000477216 TXNDC2Q86VQ3 553 aa37.95■■■■□ 3.67
SKIL-208ENST00000477216 SLIT1O75093 1534 aa37.95■■■■□ 3.67
SKIL-208ENST00000477216 ITGAEP38570 1179 aa37.93■■■■□ 3.66
SKIL-208ENST00000477216 MROH1Q8NDA8 1641 aa37.92■■■■□ 3.66
SKIL-208ENST00000477216 ARHGAP23Q9P227 1491 aa37.91■■■■□ 3.66
SKIL-208ENST00000477216 CEP152O94986 1710 aa37.9■■■■□ 3.66
SKIL-208ENST00000477216 ANKRD30AQ9BXX3 1397 aa37.9■■■■□ 3.66
SKIL-208ENST00000477216 ADGRL2O95490 1459 aa37.9■■■■□ 3.66
SKIL-208ENST00000477216 KIF15Q9NS87 1388 aa37.88■■■■□ 3.65
SKIL-208ENST00000477216 ERBINQ96RT1 1412 aa37.87■■■■□ 3.65
SKIL-208ENST00000477216 RRP7BPQ9NSQ0 103 aa37.86■■■■□ 3.65
SKIL-208ENST00000477216 CFAP65Q6ZU64 1925 aaKnown RBP37.86■■■■□ 3.65
SKIL-208ENST00000477216 STAG3Q9UJ98 1225 aa37.85■■■■□ 3.65
SKIL-208ENST00000477216 PRDM15P57071 1507 aaPredicted RBP37.85■■■■□ 3.65
SKIL-208ENST00000477216 KANK1Q14678 1352 aa37.84■■■■□ 3.65
SKIL-208ENST00000477216 LTKP29376 864 aa37.83■■■■□ 3.65
SKIL-208ENST00000477216 SENP3Q9H4L4 574 aaPredicted RBP37.81■■■■□ 3.64
SKIL-208ENST00000477216 ROCK1Q13464 1354 aa37.8■■■■□ 3.64
SKIL-208ENST00000477216 FAM135BQ49AJ0 1406 aa37.79■■■■□ 3.64
SKIL-208ENST00000477216 TMEM2Q9UHN6 1383 aa37.79■■■■□ 3.64
SKIL-208ENST00000477216 KDM5AP29375 1690 aaKnown RBP37.79■■■■□ 3.64
SKIL-208ENST00000477216 PIK3C2BO00750 1634 aa37.69■■■■□ 3.62
SKIL-208ENST00000477216 KCNA6P17658 529 aa37.69■■■■□ 3.62
SKIL-208ENST00000477216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.69■■■■□ 3.62
SKIL-208ENST00000477216 EFCAB6Q5THR3 1501 aa37.69■■■■□ 3.62
SKIL-208ENST00000477216 XIRP1Q702N8 1843 aaKnown RBP37.68■■■■□ 3.62
SKIL-208ENST00000477216 TMEM94Q12767 1356 aa37.65■■■■□ 3.62
SKIL-208ENST00000477216 ANKRD50Q9ULJ7 1429 aa37.64■■■■□ 3.62
SKIL-208ENST00000477216 LMTK2Q8IWU2 1503 aa37.63■■■■□ 3.61
SKIL-208ENST00000477216 RGS17Q9UGC6 210 aaPredicted RBP37.62■■■■□ 3.61
SKIL-208ENST00000477216 PROSER2Q86WR7 435 aaPredicted RBP37.61■■■■□ 3.61
SKIL-208ENST00000477216 IDI1Q13907 227 aa37.59■■■■□ 3.61
SKIL-208ENST00000477216 SLC52A1Q9NWF4 448 aa37.59■■■■□ 3.61
SKIL-208ENST00000477216 NKTRP30414 1462 aaKnown RBP37.58■■■■□ 3.61
SKIL-208ENST00000477216 HDGFP51858 240 aaKnown RBP37.56■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms