RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
COL4A6-206ENST00000477085 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
COL4A6-206ENST00000477085 TEX14Q8IWB6 1497 aa20.97■□□□□ 0.95
COL4A6-206ENST00000477085 A2MP01023 1474 aa20.94■□□□□ 0.94
COL4A6-206ENST00000477085 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
COL4A6-206ENST00000477085 ABCA6Q8N139 1617 aa20.94■□□□□ 0.94
COL4A6-206ENST00000477085 KIF3BO15066 747 aa20.93■□□□□ 0.94
COL4A6-206ENST00000477085 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
COL4A6-206ENST00000477085 PPP1R15AO75807 674 aaPredicted RBP20.92■□□□□ 0.94
COL4A6-206ENST00000477085 DEPDC5O75140 1603 aa20.92■□□□□ 0.94
COL4A6-206ENST00000477085 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
COL4A6-206ENST00000477085 YEATS2Q9ULM3 1422 aa20.91■□□□□ 0.94
COL4A6-206ENST00000477085 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
COL4A6-206ENST00000477085 EIF2AK4Q9P2K8 1649 aaKnown RBP20.9■□□□□ 0.94
COL4A6-206ENST00000477085 DIP2CQ9Y2E4 1556 aa20.9■□□□□ 0.94
COL4A6-206ENST00000477085 MROH1Q8NDA8 1641 aa20.89■□□□□ 0.94
COL4A6-206ENST00000477085 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
COL4A6-206ENST00000477085 VWDEQ8N2E2 1590 aa20.88■□□□□ 0.93
COL4A6-206ENST00000477085 PLA2R1Q13018 1463 aa20.87■□□□□ 0.93
COL4A6-206ENST00000477085 L3MBTL2Q969R5 705 aa20.86■□□□□ 0.93
COL4A6-206ENST00000477085 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
COL4A6-206ENST00000477085 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
COL4A6-206ENST00000477085 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
COL4A6-206ENST00000477085 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
COL4A6-206ENST00000477085 KANK1Q14678 1352 aa20.79■□□□□ 0.92
COL4A6-206ENST00000477085 E9PCH4 1651 aa20.79■□□□□ 0.92
COL4A6-206ENST00000477085 GGT6Q6P531 493 aa20.79■□□□□ 0.92
COL4A6-206ENST00000477085 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
COL4A6-206ENST00000477085 ATP10AO60312 1499 aa20.78■□□□□ 0.92
COL4A6-206ENST00000477085 TET3O43151 1660 aa20.77■□□□□ 0.91
COL4A6-206ENST00000477085 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
COL4A6-206ENST00000477085 PTPRTO14522 1441 aa20.73■□□□□ 0.91
COL4A6-206ENST00000477085 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
COL4A6-206ENST00000477085 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
COL4A6-206ENST00000477085 SIGLEC1Q9BZZ2 1709 aa20.71■□□□□ 0.91
COL4A6-206ENST00000477085 EFCAB6Q5THR3 1501 aa20.71■□□□□ 0.91
COL4A6-206ENST00000477085 CEP152O94986 1710 aa20.71■□□□□ 0.91
COL4A6-206ENST00000477085 ABCC3O15438 1527 aa20.7■□□□□ 0.9
COL4A6-206ENST00000477085 REREQ9P2R6 1566 aa20.7■□□□□ 0.9
COL4A6-206ENST00000477085 WASHC2CQ9Y4E1 1318 aa20.69■□□□□ 0.9
COL4A6-206ENST00000477085 TRPM2O94759 1503 aa20.68■□□□□ 0.9
COL4A6-206ENST00000477085 ARHGEF40Q8TER5 1519 aa20.67■□□□□ 0.9
COL4A6-206ENST00000477085 AGLP35573 1532 aa20.67■□□□□ 0.9
COL4A6-206ENST00000477085 NPATQ14207 1427 aa20.66■□□□□ 0.9
COL4A6-206ENST00000477085 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
COL4A6-206ENST00000477085 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
COL4A6-206ENST00000477085 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
COL4A6-206ENST00000477085 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
COL4A6-206ENST00000477085 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
COL4A6-206ENST00000477085 UGGT1Q9NYU2 1555 aa20.61■□□□□ 0.89
COL4A6-206ENST00000477085 CAMSAP1Q5T5Y3 1602 aa20.61■□□□□ 0.89
COL4A6-206ENST00000477085 HIRIP3Q9BW71 556 aaPredicted RBP20.61■□□□□ 0.89
COL4A6-206ENST00000477085 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
COL4A6-206ENST00000477085 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
COL4A6-206ENST00000477085 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.88
COL4A6-206ENST00000477085 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
COL4A6-206ENST00000477085 ZC3H13Q5T200 1668 aaKnown RBP20.57■□□□□ 0.88
COL4A6-206ENST00000477085 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
COL4A6-206ENST00000477085 NOS1P29475 1434 aa20.56■□□□□ 0.88
COL4A6-206ENST00000477085 MLECQ14165 292 aa20.56■□□□□ 0.88
COL4A6-206ENST00000477085 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
COL4A6-206ENST00000477085 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
COL4A6-206ENST00000477085 PRAG1Q86YV5 1406 aa20.52■□□□□ 0.88
COL4A6-206ENST00000477085 CFAP65Q6ZU64 1925 aaKnown RBP20.52■□□□□ 0.88
COL4A6-206ENST00000477085 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
COL4A6-206ENST00000477085 SYNMO15061 1565 aa20.51■□□□□ 0.87
COL4A6-206ENST00000477085 FBXO31Q5XUX0 539 aaPredicted RBP20.5■□□□□ 0.87
COL4A6-206ENST00000477085 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
COL4A6-206ENST00000477085 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
COL4A6-206ENST00000477085 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
COL4A6-206ENST00000477085 EIF4G2P78344 907 aaKnown RBP eCLIP20.48■□□□□ 0.87
COL4A6-206ENST00000477085 ARID4BQ4LE39 1312 aaPredicted RBP20.47■□□□□ 0.87
COL4A6-206ENST00000477085 MROH2AA6NES4 1674 aa20.46■□□□□ 0.87
COL4A6-206ENST00000477085 PIK3C2BO00750 1634 aa20.46■□□□□ 0.87
COL4A6-206ENST00000477085 ADGRB3O60242 1522 aa20.45■□□□□ 0.87
COL4A6-206ENST00000477085 IDI1Q13907 227 aa20.45■□□□□ 0.86
COL4A6-206ENST00000477085 NBPF1Q3BBV0 1214 aa20.45■□□□□ 0.86
COL4A6-206ENST00000477085 PREX1Q8TCU6 1659 aa20.45■□□□□ 0.86
COL4A6-206ENST00000477085 KIF1BO60333 1816 aa20.43■□□□□ 0.86
COL4A6-206ENST00000477085 TRPM1Q7Z4N2 1603 aa20.43■□□□□ 0.86
COL4A6-206ENST00000477085 ERVK-7P63135 1459 aa20.43■□□□□ 0.86
COL4A6-206ENST00000477085 CHGAP10645 457 aaKnown RBP20.42■□□□□ 0.86
COL4A6-206ENST00000477085 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
COL4A6-206ENST00000477085 CARD11Q9BXL7 1154 aa20.41■□□□□ 0.86
COL4A6-206ENST00000477085 SLC52A1Q9NWF4 448 aa20.41■□□□□ 0.86
COL4A6-206ENST00000477085 MADDQ8WXG6 1647 aa20.4■□□□□ 0.86
COL4A6-206ENST00000477085 C11orf95C9JLR9 678 aaPredicted RBP20.4■□□□□ 0.86
COL4A6-206ENST00000477085 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
COL4A6-206ENST00000477085 USP47Q96K76 1375 aa20.4■□□□□ 0.86
COL4A6-206ENST00000477085 STAC3Q96MF2 364 aa20.39■□□□□ 0.86
COL4A6-206ENST00000477085 ADGRF5Q8IZF2 1346 aa20.39■□□□□ 0.85
COL4A6-206ENST00000477085 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
COL4A6-206ENST00000477085 IFT172Q9UG01 1749 aa20.38■□□□□ 0.85
COL4A6-206ENST00000477085 SPATA31D1Q6ZQQ2 1576 aa20.38■□□□□ 0.85
COL4A6-206ENST00000477085 MYOM2P54296 1465 aa20.36■□□□□ 0.85
COL4A6-206ENST00000477085 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
COL4A6-206ENST00000477085 ESF1Q9H501 851 aaKnown RBP20.36■□□□□ 0.85
COL4A6-206ENST00000477085 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
COL4A6-206ENST00000477085 NRXN1Q9ULB1 1477 aa20.35■□□□□ 0.85
COL4A6-206ENST00000477085 TMEM131LA2VDJ0 1609 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms