RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.02■■■□□ 2.242e-7■■■□□ 15
CLK2-205ENST00000476983 YEATS2Q9ULM3 1422 aa29.02■■■□□ 2.24
CLK2-205ENST00000476983 FOXD1Q16676 465 aa29■■■□□ 2.23
CLK2-205ENST00000476983 EIF2AK4Q9P2K8 1649 aaKnown RBP29■■■□□ 2.23
CLK2-205ENST00000476983 SIN3AQ96ST3 1273 aa28.97■■■□□ 2.23
CLK2-205ENST00000476983 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
CLK2-205ENST00000476983 FAM135AQ9P2D6 1515 aa28.97■■■□□ 2.23
CLK2-205ENST00000476983 KIF3BO15066 747 aa28.95■■■□□ 2.23
CLK2-205ENST00000476983 DEPDC5O75140 1603 aa28.95■■■□□ 2.22
CLK2-205ENST00000476983 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
CLK2-205ENST00000476983 NEUROD1Q13562 356 aa28.93■■■□□ 2.22
CLK2-205ENST00000476983 PKD2Q13563 968 aa28.92■■■□□ 2.22
CLK2-205ENST00000476983 MROH1Q8NDA8 1641 aa28.89■■■□□ 2.22
CLK2-205ENST00000476983 RNF17Q9BXT8 1623 aaKnown RBP28.86■■■□□ 2.21
CLK2-205ENST00000476983 PRDM15P57071 1507 aaPredicted RBP28.86■■■□□ 2.21
CLK2-205ENST00000476983 BCORL1Q5H9F3 1711 aa28.85■■■□□ 2.21
CLK2-205ENST00000476983 ATP10AO60312 1499 aa28.84■■■□□ 2.21
CLK2-205ENST00000476983 ARHGEF40Q8TER5 1519 aa28.84■■■□□ 2.21
CLK2-205ENST00000476983 ANKRD30BQ9BXX2 1392 aa28.84■■■□□ 2.21
CLK2-205ENST00000476983 KANK1Q14678 1352 aa28.82■■■□□ 2.2
CLK2-205ENST00000476983 VWDEQ8N2E2 1590 aa28.82■■■□□ 2.2
CLK2-205ENST00000476983 GGT6Q6P531 493 aa28.8■■■□□ 2.2
CLK2-205ENST00000476983 CEP152O94986 1710 aa28.78■■■□□ 2.2
CLK2-205ENST00000476983 SIGLEC1Q9BZZ2 1709 aa28.77■■■□□ 2.2
CLK2-205ENST00000476983 REREQ9P2R6 1566 aa28.77■■■□□ 2.2
CLK2-205ENST00000476983 TET3O43151 1660 aa28.76■■■□□ 2.2
CLK2-205ENST00000476983 E9PCH4 1651 aa28.75■■■□□ 2.19
CLK2-205ENST00000476983 TONSLQ96HA7 1378 aa28.72■■■□□ 2.19
CLK2-205ENST00000476983 RPRD2Q5VT52 1461 aaKnown RBP28.7■■■□□ 2.18
CLK2-205ENST00000476983 AGLP35573 1532 aa28.68■■■□□ 2.18
CLK2-205ENST00000476983 LMTK2Q8IWU2 1503 aa28.68■■■□□ 2.18
CLK2-205ENST00000476983 ABCC3O15438 1527 aa28.67■■■□□ 2.18
CLK2-205ENST00000476983 EFCAB6Q5THR3 1501 aa28.67■■■□□ 2.18
CLK2-205ENST00000476983 PLA2R1Q13018 1463 aa28.65■■■□□ 2.18
CLK2-205ENST00000476983 WASHC2CQ9Y4E1 1318 aa28.65■■■□□ 2.18
CLK2-205ENST00000476983 TIMELESSQ9UNS1 1208 aa28.63■■■□□ 2.17
CLK2-205ENST00000476983 CAMSAP1Q5T5Y3 1602 aa28.62■■■□□ 2.17
CLK2-205ENST00000476983 SPHKAPQ2M3C7 1700 aa28.62■■■□□ 2.17
CLK2-205ENST00000476983 ZC3H13Q5T200 1668 aaKnown RBP28.62■■■□□ 2.17
CLK2-205ENST00000476983 MLECQ14165 292 aa28.61■■■□□ 2.17
CLK2-205ENST00000476983 CCDC144AA2RUR9 1427 aa28.6■■■□□ 2.17
CLK2-205ENST00000476983 ARID4BQ4LE39 1312 aaPredicted RBP28.57■■■□□ 2.16
CLK2-205ENST00000476983 TRPM2O94759 1503 aa28.56■■■□□ 2.16
CLK2-205ENST00000476983 CFAP65Q6ZU64 1925 aaKnown RBP28.55■■■□□ 2.16
CLK2-205ENST00000476983 NPATQ14207 1427 aa28.55■■■□□ 2.16
CLK2-205ENST00000476983 L3MBTL2Q969R5 705 aa28.55■■■□□ 2.16
CLK2-205ENST00000476983 PTPRTO14522 1441 aa28.54■■■□□ 2.16
CLK2-205ENST00000476983 PPP1R15AO75807 674 aaPredicted RBP28.53■■■□□ 2.16
CLK2-205ENST00000476983 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
CLK2-205ENST00000476983 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
CLK2-205ENST00000476983 UGGT1Q9NYU2 1555 aa28.48■■■□□ 2.15
CLK2-205ENST00000476983 ARHGAP31Q2M1Z3 1444 aa28.45■■■□□ 2.14
CLK2-205ENST00000476983 PPP6R1Q9UPN7 881 aa28.44■■■□□ 2.14
CLK2-205ENST00000476983 RGL3Q3MIN7 710 aa28.41■■■□□ 2.14
CLK2-205ENST00000476983 PREX1Q8TCU6 1659 aa28.41■■■□□ 2.14
CLK2-205ENST00000476983 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
CLK2-205ENST00000476983 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
CLK2-205ENST00000476983 NOS1P29475 1434 aa28.39■■■□□ 2.14
CLK2-205ENST00000476983 SYNMO15061 1565 aa28.39■■■□□ 2.14
CLK2-205ENST00000476983 KIF1BO60333 1816 aa28.37■■■□□ 2.13
CLK2-205ENST00000476983 SPATA31E1Q6ZUB1 1445 aa28.36■■■□□ 2.13
CLK2-205ENST00000476983 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
CLK2-205ENST00000476983 FBXO31Q5XUX0 539 aaPredicted RBP28.34■■■□□ 2.13
CLK2-205ENST00000476983 KDM2AQ9Y2K7 1162 aa28.34■■■□□ 2.13
CLK2-205ENST00000476983 NBPF8Q3BBV2 869 aa28.34■■■□□ 2.13
CLK2-205ENST00000476983 ZNF326Q5BKZ1 582 aaKnown RBP28.34■■■□□ 2.13
CLK2-205ENST00000476983 MROH2AA6NES4 1674 aa28.33■■■□□ 2.13
CLK2-205ENST00000476983 ERVK-7P63135 1459 aa28.33■■■□□ 2.13
CLK2-205ENST00000476983 FER1L4A9Z1Z3 1794 aa28.31■■■□□ 2.12
CLK2-205ENST00000476983 PIK3C2BO00750 1634 aa28.31■■■□□ 2.12
CLK2-205ENST00000476983 ZMYM3Q14202 1370 aa28.3■■■□□ 2.12
CLK2-205ENST00000476983 CHGAP10645 457 aaKnown RBP28.28■■■□□ 2.12
CLK2-205ENST00000476983 ADGRB3O60242 1522 aa28.27■■■□□ 2.12
CLK2-205ENST00000476983 SPATA31D1Q6ZQQ2 1576 aa28.26■■■□□ 2.11
CLK2-205ENST00000476983 NEURL4Q96JN8 1562 aa28.25■■■□□ 2.11
CLK2-205ENST00000476983 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
CLK2-205ENST00000476983 ZNF316A6NFI3 1004 aaPredicted RBP28.24■■■□□ 2.11
CLK2-205ENST00000476983 IDI1Q13907 227 aa28.22■■■□□ 2.11
CLK2-205ENST00000476983 SLC52A1Q9NWF4 448 aa28.2■■■□□ 2.1
CLK2-205ENST00000476983 PRAG1Q86YV5 1406 aa28.19■■■□□ 2.1
CLK2-205ENST00000476983 MADDQ8WXG6 1647 aa28.19■■■□□ 2.1
CLK2-205ENST00000476983 C3P01024 1663 aa28.19■■■□□ 2.1
CLK2-205ENST00000476983 IFT172Q9UG01 1749 aa28.18■■■□□ 2.1
CLK2-205ENST00000476983 MYO5BQ9ULV0 1848 aa28.18■■■□□ 2.1
CLK2-205ENST00000476983 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
CLK2-205ENST00000476983 CEBPAP49715 358 aaPredicted RBP28.17■■■□□ 2.1
CLK2-205ENST00000476983 RIMS1Q86UR5 1692 aaKnown RBP28.16■■■□□ 2.1
CLK2-205ENST00000476983 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
CLK2-205ENST00000476983 TRPM1Q7Z4N2 1603 aa28.14■■■□□ 2.1
CLK2-205ENST00000476983 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.1
CLK2-205ENST00000476983 HIRIP3Q9BW71 556 aaPredicted RBP28.13■■■□□ 2.09
CLK2-205ENST00000476983 PPLO60437 1756 aa28.13■■■□□ 2.09
CLK2-205ENST00000476983 TNRQ92752 1358 aa28.12■■■□□ 2.09
CLK2-205ENST00000476983 ADAMTSL3P82987 1691 aa28.12■■■□□ 2.09
CLK2-205ENST00000476983 MYOM2P54296 1465 aa28.09■■■□□ 2.09
CLK2-205ENST00000476983 STAG3Q9UJ98 1225 aa28.08■■■□□ 2.09
CLK2-205ENST00000476983 NEXMIFQ5QGS0 1516 aa28.07■■■□□ 2.08
CLK2-205ENST00000476983 ROCK2O75116 1388 aaKnown RBP28.06■■■□□ 2.08
CLK2-205ENST00000476983 ADGRF5Q8IZF2 1346 aa28.06■■■□□ 2.08
CLK2-205ENST00000476983 HSPA5P11021 654 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms