RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 PLEKHH2Q8IVE3 1493 aa12.25□□□□□ -0.45
PRPF3-205ENST00000476970 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
PRPF3-205ENST00000476970 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
PRPF3-205ENST00000476970 GGT6Q6P531 493 aa12.24□□□□□ -0.45
PRPF3-205ENST00000476970 TNRQ92752 1358 aa12.23□□□□□ -0.45
PRPF3-205ENST00000476970 MED14O60244 1454 aa12.22□□□□□ -0.45
PRPF3-205ENST00000476970 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
PRPF3-205ENST00000476970 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
PRPF3-205ENST00000476970 KIAA1107Q9UPP5 1409 aa12.21□□□□□ -0.45
PRPF3-205ENST00000476970 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
PRPF3-205ENST00000476970 PZPP20742 1482 aa12.21□□□□□ -0.46
PRPF3-205ENST00000476970 NLRP1Q9C000 1473 aa12.21□□□□□ -0.46
PRPF3-205ENST00000476970 UGGT1Q9NYU2 1555 aa12.2□□□□□ -0.46
PRPF3-205ENST00000476970 LRRC7Q96NW7 1537 aa12.2□□□□□ -0.46
PRPF3-205ENST00000476970 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
PRPF3-205ENST00000476970 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
PRPF3-205ENST00000476970 CASKIN1Q8WXD9 1431 aa12.19□□□□□ -0.46
PRPF3-205ENST00000476970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRPF3-205ENST00000476970 UBTFP17480 764 aaKnown RBP12.18□□□□□ -0.46
PRPF3-205ENST00000476970 THEMISQ8N1K5 641 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-205ENST00000476970 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-205ENST00000476970 GPATCH8Q9UKJ3 1502 aaKnown RBP12.17□□□□□ -0.46
PRPF3-205ENST00000476970 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
PRPF3-205ENST00000476970 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.46
PRPF3-205ENST00000476970 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
PRPF3-205ENST00000476970 ZC3H13Q5T200 1668 aaKnown RBP12.13□□□□□ -0.47
PRPF3-205ENST00000476970 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
PRPF3-205ENST00000476970 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
PRPF3-205ENST00000476970 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-205ENST00000476970 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
PRPF3-205ENST00000476970 DHX29Q7Z478 1369 aaKnown RBP12.12□□□□□ -0.47
PRPF3-205ENST00000476970 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
PRPF3-205ENST00000476970 FBXO31Q5XUX0 539 aaPredicted RBP12.11□□□□□ -0.47
PRPF3-205ENST00000476970 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
PRPF3-205ENST00000476970 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
PRPF3-205ENST00000476970 WASHC2CQ9Y4E1 1318 aa12.1□□□□□ -0.47
PRPF3-205ENST00000476970 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
PRPF3-205ENST00000476970 KIF3BO15066 747 aa12.08□□□□□ -0.48
PRPF3-205ENST00000476970 LRRC9Q6ZRR7 1453 aa12.08□□□□□ -0.48
PRPF3-205ENST00000476970 UBR1Q8IWV7 1749 aa12.07□□□□□ -0.48
PRPF3-205ENST00000476970 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
PRPF3-205ENST00000476970 SCAF11Q99590 1463 aaKnown RBP12.07□□□□□ -0.48
PRPF3-205ENST00000476970 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
PRPF3-205ENST00000476970 TIAM1Q13009 1591 aa12.05□□□□□ -0.48
PRPF3-205ENST00000476970 CCDC141Q6ZP82 1450 aa12.05□□□□□ -0.48
PRPF3-205ENST00000476970 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
PRPF3-205ENST00000476970 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
PRPF3-205ENST00000476970 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
PRPF3-205ENST00000476970 ABCC3O15438 1527 aa12.02□□□□□ -0.48
PRPF3-205ENST00000476970 SLIT1O75093 1534 aa12.02□□□□□ -0.48
PRPF3-205ENST00000476970 EHBP1L1Q8N3D4 1523 aa12.02□□□□□ -0.48
PRPF3-205ENST00000476970 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
PRPF3-205ENST00000476970 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
PRPF3-205ENST00000476970 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
PRPF3-205ENST00000476970 JCADQ9P266 1359 aa12□□□□□ -0.49
PRPF3-205ENST00000476970 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRPF3-205ENST00000476970 ZNF644Q9H582 1327 aaPredicted RBP11.99□□□□□ -0.49
PRPF3-205ENST00000476970 CEP152O94986 1710 aa11.99□□□□□ -0.49
PRPF3-205ENST00000476970 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
PRPF3-205ENST00000476970 CAMSAP2Q08AD1 1489 aa11.98□□□□□ -0.49
PRPF3-205ENST00000476970 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
PRPF3-205ENST00000476970 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
PRPF3-205ENST00000476970 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
PRPF3-205ENST00000476970 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
PRPF3-205ENST00000476970 NKTRP30414 1462 aaKnown RBP11.97□□□□□ -0.49
PRPF3-205ENST00000476970 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
PRPF3-205ENST00000476970 ZNF772Q68DY9 489 aaPredicted RBP11.97□□□□□ -0.49
PRPF3-205ENST00000476970 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
PRPF3-205ENST00000476970 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
PRPF3-205ENST00000476970 KDM5AP29375 1690 aaKnown RBP11.96□□□□□ -0.5
PRPF3-205ENST00000476970 COL16A1Q07092 1604 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-205ENST00000476970 NWD1Q149M9 1564 aa11.95□□□□□ -0.5
PRPF3-205ENST00000476970 PRDM15P57071 1507 aaPredicted RBP11.95□□□□□ -0.5
PRPF3-205ENST00000476970 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
PRPF3-205ENST00000476970 MSH6P52701 1360 aa11.94□□□□□ -0.5
PRPF3-205ENST00000476970 MEX3CQ5U5Q3 659 aaKnown RBP11.94□□□□□ -0.5
PRPF3-205ENST00000476970 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
PRPF3-205ENST00000476970 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
PRPF3-205ENST00000476970 PIK3C2BO00750 1634 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 LTKP29376 864 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
PRPF3-205ENST00000476970 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
PRPF3-205ENST00000476970 TSPY4P0CV99 314 aa11.92□□□□□ -0.5
PRPF3-205ENST00000476970 TSPY10P0CW01 314 aa11.92□□□□□ -0.5
PRPF3-205ENST00000476970 KCNA6P17658 529 aa11.92□□□□□ -0.5
PRPF3-205ENST00000476970 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
PRPF3-205ENST00000476970 LRP6O75581 1613 aa11.91□□□□□ -0.5
PRPF3-205ENST00000476970 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
PRPF3-205ENST00000476970 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
PRPF3-205ENST00000476970 ARHGAP31Q2M1Z3 1444 aa11.9□□□□□ -0.5
PRPF3-205ENST00000476970 RXRBP28702 533 aa11.89□□□□□ -0.51
PRPF3-205ENST00000476970 SLAIN2Q9P270 581 aa11.89□□□□□ -0.51
PRPF3-205ENST00000476970 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
PRPF3-205ENST00000476970 TET3O43151 1660 aa11.88□□□□□ -0.51
PRPF3-205ENST00000476970 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-205ENST00000476970 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
PRPF3-205ENST00000476970 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms