RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 RNF17Q9BXT8 1623 aaKnown RBP22.98■■□□□ 1.27
DFFA-203ENST00000476658 ITGAEP38570 1179 aa22.98■■□□□ 1.27
DFFA-203ENST00000476658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.27
DFFA-203ENST00000476658 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
DFFA-203ENST00000476658 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
DFFA-203ENST00000476658 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
DFFA-203ENST00000476658 ZMYM3Q14202 1370 aa22.96■■□□□ 1.27
DFFA-203ENST00000476658 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
DFFA-203ENST00000476658 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
DFFA-203ENST00000476658 KDM5DQ9BY66 1539 aa22.94■■□□□ 1.26
DFFA-203ENST00000476658 PREX1Q8TCU6 1659 aa22.93■■□□□ 1.26
DFFA-203ENST00000476658 FAM135AQ9P2D6 1515 aa22.93■■□□□ 1.26
DFFA-203ENST00000476658 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
DFFA-203ENST00000476658 LMTK3Q96Q04 1460 aa22.91■■□□□ 1.26
DFFA-203ENST00000476658 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
DFFA-203ENST00000476658 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
DFFA-203ENST00000476658 CEP152O94986 1710 aa22.89■■□□□ 1.26
DFFA-203ENST00000476658 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
DFFA-203ENST00000476658 DEPDC5O75140 1603 aa22.87■■□□□ 1.25
DFFA-203ENST00000476658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.87■■□□□ 1.25
DFFA-203ENST00000476658 ABCC3O15438 1527 aa22.87■■□□□ 1.25
DFFA-203ENST00000476658 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
DFFA-203ENST00000476658 NPATQ14207 1427 aa22.86■■□□□ 1.25
DFFA-203ENST00000476658 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
DFFA-203ENST00000476658 UHRF1BP1Q6BDS2 1440 aa22.85■■□□□ 1.25
DFFA-203ENST00000476658 KANK1Q14678 1352 aa22.83■■□□□ 1.25
DFFA-203ENST00000476658 CAMSAP1Q5T5Y3 1602 aa22.82■■□□□ 1.24
DFFA-203ENST00000476658 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
DFFA-203ENST00000476658 PZPP20742 1482 aa22.82■■□□□ 1.24
DFFA-203ENST00000476658 HSPA2P54652 639 aa22.82■■□□□ 1.24
DFFA-203ENST00000476658 FBXO31Q5XUX0 539 aaPredicted RBP22.79■■□□□ 1.24
DFFA-203ENST00000476658 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
DFFA-203ENST00000476658 VWDEQ8N2E2 1590 aa22.75■■□□□ 1.23
DFFA-203ENST00000476658 TNRQ92752 1358 aa22.75■■□□□ 1.23
DFFA-203ENST00000476658 UNC13BO14795 1591 aa22.74■■□□□ 1.23
DFFA-203ENST00000476658 ZNF142P52746 1687 aaPredicted RBP22.73■■□□□ 1.23
DFFA-203ENST00000476658 GCC2Q8IWJ2 1684 aa22.72■■□□□ 1.23
DFFA-203ENST00000476658 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
DFFA-203ENST00000476658 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
DFFA-203ENST00000476658 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
DFFA-203ENST00000476658 ERVK-7P63135 1459 aa22.7■■□□□ 1.22
DFFA-203ENST00000476658 SPATA31D1Q6ZQQ2 1576 aa22.7■■□□□ 1.22
DFFA-203ENST00000476658 NAIPQ13075 1403 aa22.68■■□□□ 1.22
DFFA-203ENST00000476658 EFCAB6Q5THR3 1501 aa22.67■■□□□ 1.22
DFFA-203ENST00000476658 A2ML1A8K2U0 1454 aa22.67■■□□□ 1.22
DFFA-203ENST00000476658 TET3O43151 1660 aa22.67■■□□□ 1.22
DFFA-203ENST00000476658 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
DFFA-203ENST00000476658 IQGAP3Q86VI3 1631 aa22.65■■□□□ 1.22
DFFA-203ENST00000476658 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
DFFA-203ENST00000476658 NLRP1Q9C000 1473 aa22.65■■□□□ 1.22
DFFA-203ENST00000476658 NUP155O75694 1391 aa22.64■■□□□ 1.22
DFFA-203ENST00000476658 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
DFFA-203ENST00000476658 RPRD2Q5VT52 1461 aaKnown RBP22.59■■□□□ 1.21
DFFA-203ENST00000476658 E9PCH4 1651 aa22.58■■□□□ 1.21
DFFA-203ENST00000476658 SYNMO15061 1565 aa22.56■■□□□ 1.2
DFFA-203ENST00000476658 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
DFFA-203ENST00000476658 THEMISQ8N1K5 641 aaPredicted RBP22.55■■□□□ 1.2
DFFA-203ENST00000476658 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
DFFA-203ENST00000476658 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
DFFA-203ENST00000476658 NOS1P29475 1434 aa22.55■■□□□ 1.2
DFFA-203ENST00000476658 UBR1Q8IWV7 1749 aa22.54■■□□□ 1.2
DFFA-203ENST00000476658 PIK3C2BO00750 1634 aa22.54■■□□□ 1.2
DFFA-203ENST00000476658 NCKAP5LQ9HCH0 1330 aa22.54■■□□□ 1.2
DFFA-203ENST00000476658 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
DFFA-203ENST00000476658 PKD2Q13563 968 aa22.5■■□□□ 1.19
DFFA-203ENST00000476658 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
DFFA-203ENST00000476658 IDI1Q13907 227 aa22.49■■□□□ 1.19
DFFA-203ENST00000476658 PTPRTO14522 1441 aa22.48■■□□□ 1.19
DFFA-203ENST00000476658 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
DFFA-203ENST00000476658 SPHKAPQ2M3C7 1700 aa22.47■■□□□ 1.19
DFFA-203ENST00000476658 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
DFFA-203ENST00000476658 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
DFFA-203ENST00000476658 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
DFFA-203ENST00000476658 ADGRB3O60242 1522 aa22.44■■□□□ 1.18
DFFA-203ENST00000476658 MYO5BQ9ULV0 1848 aa22.44■■□□□ 1.18
DFFA-203ENST00000476658 NEURL4Q96JN8 1562 aa22.43■■□□□ 1.18
DFFA-203ENST00000476658 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
DFFA-203ENST00000476658 SLIT1O75093 1534 aa22.4■■□□□ 1.18
DFFA-203ENST00000476658 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
DFFA-203ENST00000476658 CHGAP10645 457 aaKnown RBP22.39■■□□□ 1.17
DFFA-203ENST00000476658 ARHGAP23Q9P227 1491 aa22.39■■□□□ 1.17
DFFA-203ENST00000476658 IQGAP1P46940 1657 aa22.38■■□□□ 1.17
DFFA-203ENST00000476658 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
DFFA-203ENST00000476658 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
DFFA-203ENST00000476658 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
DFFA-203ENST00000476658 SCAF11Q99590 1463 aaKnown RBP22.37■■□□□ 1.17
DFFA-203ENST00000476658 TXNDC2Q86VQ3 553 aa22.37■■□□□ 1.17
DFFA-203ENST00000476658 EID1Q9Y6B2 187 aa22.37■■□□□ 1.17
DFFA-203ENST00000476658 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
DFFA-203ENST00000476658 MED14O60244 1454 aa22.35■■□□□ 1.17
DFFA-203ENST00000476658 TRPM2O94759 1503 aa22.35■■□□□ 1.17
DFFA-203ENST00000476658 LTKP29376 864 aa22.34■■□□□ 1.17
DFFA-203ENST00000476658 CLTCL1P53675 1640 aa22.33■■□□□ 1.17
DFFA-203ENST00000476658 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.17
DFFA-203ENST00000476658 FOXD1Q16676 465 aa22.32■■□□□ 1.16
DFFA-203ENST00000476658 KIF1BO60333 1816 aa22.31■■□□□ 1.16
DFFA-203ENST00000476658 ZNF335Q9H4Z2 1342 aaPredicted RBP22.3■■□□□ 1.16
DFFA-203ENST00000476658 RIMS2Q9UQ26 1411 aa22.29■■□□□ 1.16
DFFA-203ENST00000476658 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
DFFA-203ENST00000476658 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms