RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
XPC-205ENST00000476581 HECW2Q9P2P5 1572 aa17.38■□□□□ 0.37
XPC-205ENST00000476581 PKD2Q13563 968 aa17.36■□□□□ 0.37
XPC-205ENST00000476581 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
XPC-205ENST00000476581 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
XPC-205ENST00000476581 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
XPC-205ENST00000476581 UNC13BO14795 1591 aa17.35■□□□□ 0.37
XPC-205ENST00000476581 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
XPC-205ENST00000476581 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
XPC-205ENST00000476581 KIF3BO15066 747 aa17.33■□□□□ 0.36
XPC-205ENST00000476581 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.36
XPC-205ENST00000476581 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.36
XPC-205ENST00000476581 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
XPC-205ENST00000476581 ANKRD30BQ9BXX2 1392 aa17.32■□□□□ 0.36
XPC-205ENST00000476581 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
XPC-205ENST00000476581 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
XPC-205ENST00000476581 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
XPC-205ENST00000476581 MROH1Q8NDA8 1641 aa17.31■□□□□ 0.36
XPC-205ENST00000476581 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
XPC-205ENST00000476581 A2MP01023 1474 aa17.3■□□□□ 0.36
XPC-205ENST00000476581 MAGI2Q86UL8 1455 aa17.3■□□□□ 0.36
XPC-205ENST00000476581 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
XPC-205ENST00000476581 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
XPC-205ENST00000476581 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
XPC-205ENST00000476581 GGT6Q6P531 493 aa17.24■□□□□ 0.35
XPC-205ENST00000476581 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
XPC-205ENST00000476581 EIF2AK4Q9P2K8 1649 aaKnown RBP17.24■□□□□ 0.35
XPC-205ENST00000476581 E9PCH4 1651 aa17.23■□□□□ 0.35
XPC-205ENST00000476581 CEP152O94986 1710 aa17.22■□□□□ 0.35
XPC-205ENST00000476581 MIER1Q8N108 512 aa17.22■□□□□ 0.35
XPC-205ENST00000476581 PRDM15P57071 1507 aaPredicted RBP17.22■□□□□ 0.35
XPC-205ENST00000476581 VWDEQ8N2E2 1590 aa17.21■□□□□ 0.35
XPC-205ENST00000476581 CFAP65Q6ZU64 1925 aaKnown RBP17.2■□□□□ 0.34
XPC-205ENST00000476581 RPRD2Q5VT52 1461 aaKnown RBP17.2■□□□□ 0.34
XPC-205ENST00000476581 RNF17Q9BXT8 1623 aaKnown RBP17.2■□□□□ 0.34
XPC-205ENST00000476581 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
XPC-205ENST00000476581 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
XPC-205ENST00000476581 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
XPC-205ENST00000476581 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
XPC-205ENST00000476581 ATP10AO60312 1499 aa17.16■□□□□ 0.34
XPC-205ENST00000476581 TET3O43151 1660 aa17.15■□□□□ 0.34
XPC-205ENST00000476581 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.33
XPC-205ENST00000476581 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
XPC-205ENST00000476581 MLECQ14165 292 aa17.14■□□□□ 0.33
XPC-205ENST00000476581 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
XPC-205ENST00000476581 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
XPC-205ENST00000476581 ABCC3O15438 1527 aa17.12■□□□□ 0.33
XPC-205ENST00000476581 KANK1Q14678 1352 aa17.12■□□□□ 0.33
XPC-205ENST00000476581 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
XPC-205ENST00000476581 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
XPC-205ENST00000476581 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
XPC-205ENST00000476581 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
XPC-205ENST00000476581 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
XPC-205ENST00000476581 RGL3Q3MIN7 710 aa17.1■□□□□ 0.33
XPC-205ENST00000476581 NPATQ14207 1427 aa17.09■□□□□ 0.33
XPC-205ENST00000476581 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
XPC-205ENST00000476581 CLTCL1P53675 1640 aa17.08■□□□□ 0.33
XPC-205ENST00000476581 CAMSAP1Q5T5Y3 1602 aa17.08■□□□□ 0.32
XPC-205ENST00000476581 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
XPC-205ENST00000476581 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
XPC-205ENST00000476581 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
XPC-205ENST00000476581 PTPRTO14522 1441 aa17.06■□□□□ 0.32
XPC-205ENST00000476581 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
XPC-205ENST00000476581 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
XPC-205ENST00000476581 TRPM2O94759 1503 aa17.05■□□□□ 0.32
XPC-205ENST00000476581 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
XPC-205ENST00000476581 FBXO31Q5XUX0 539 aaPredicted RBP17.03■□□□□ 0.32
XPC-205ENST00000476581 AGLP35573 1532 aa17.03■□□□□ 0.32
XPC-205ENST00000476581 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
XPC-205ENST00000476581 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
XPC-205ENST00000476581 MROH2AA6NES4 1674 aa17■□□□□ 0.31
XPC-205ENST00000476581 SYNMO15061 1565 aa17■□□□□ 0.31
XPC-205ENST00000476581 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
XPC-205ENST00000476581 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
XPC-205ENST00000476581 PREX1Q8TCU6 1659 aa16.96■□□□□ 0.3
XPC-205ENST00000476581 NOS1P29475 1434 aa16.95■□□□□ 0.3
XPC-205ENST00000476581 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
XPC-205ENST00000476581 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
XPC-205ENST00000476581 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
XPC-205ENST00000476581 KIF1BO60333 1816 aa16.93■□□□□ 0.3
XPC-205ENST00000476581 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
XPC-205ENST00000476581 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
XPC-205ENST00000476581 CEBPAP49715 358 aaPredicted RBP16.92■□□□□ 0.3
XPC-205ENST00000476581 IDI1Q13907 227 aa16.92■□□□□ 0.3
XPC-205ENST00000476581 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
XPC-205ENST00000476581 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
XPC-205ENST00000476581 NBPF1Q3BBV0 1214 aa16.91■□□□□ 0.3
XPC-205ENST00000476581 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
XPC-205ENST00000476581 PRAG1Q86YV5 1406 aa16.9■□□□□ 0.3
XPC-205ENST00000476581 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
XPC-205ENST00000476581 ZMYM3Q14202 1370 aa16.9■□□□□ 0.3
XPC-205ENST00000476581 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
XPC-205ENST00000476581 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
XPC-205ENST00000476581 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
XPC-205ENST00000476581 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
XPC-205ENST00000476581 TRPM1Q7Z4N2 1603 aa16.87■□□□□ 0.29
XPC-205ENST00000476581 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
XPC-205ENST00000476581 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
XPC-205ENST00000476581 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
XPC-205ENST00000476581 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms